Protein–RNA interactions for Protein: Q5S007

LRRK2, Leucine-rich repeat serine/threonine-protein kinase 2, humanhuman

Predictions only

Length 2,527 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK2Q5S007 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC19.89■□□□□ 0.77
LRRK2Q5S007 IFNGR2-201ENST00000290219 2221 ntAPPRIS P3 TSL 1 (best) BASIC19.89■□□□□ 0.77
LRRK2Q5S007 ARHGAP22-202ENST00000374170 2107 ntTSL 5 BASIC19.89■□□□□ 0.77
LRRK2Q5S007 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
LRRK2Q5S007 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC19.89■□□□□ 0.77
LRRK2Q5S007 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
LRRK2Q5S007 REXO4-201ENST00000371935 1899 ntTSL 3 BASIC19.88■□□□□ 0.77
LRRK2Q5S007 TST-202ENST00000403892 1797 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
LRRK2Q5S007 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC19.88■□□□□ 0.77
LRRK2Q5S007 DPF1-202ENST00000412732 2303 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
LRRK2Q5S007 SHD-204ENST00000599689 1729 ntTSL 5 BASIC19.88■□□□□ 0.77
LRRK2Q5S007 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC19.88■□□□□ 0.77
LRRK2Q5S007 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
LRRK2Q5S007 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC19.88■□□□□ 0.77
LRRK2Q5S007 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
LRRK2Q5S007 ROM1-201ENST00000278833 1878 ntAPPRIS P2 TSL 1 (best) BASIC19.87■□□□□ 0.77
LRRK2Q5S007 AC083906.2-201ENST00000511578 360 ntBASIC19.87■□□□□ 0.77
LRRK2Q5S007 COX6C-208ENST00000522940 694 ntAPPRIS P1 TSL 3 BASIC19.87■□□□□ 0.77
LRRK2Q5S007 AL138781.1-201ENST00000566567 1274 ntBASIC19.87■□□□□ 0.77
LRRK2Q5S007 PFKL-212ENST00000628044 129 ntTSL 3 BASIC19.87■□□□□ 0.77
LRRK2Q5S007 PORCN-202ENST00000355961 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC19.87■□□□□ 0.77
LRRK2Q5S007 PEX26-202ENST00000399744 1672 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
LRRK2Q5S007 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC19.86■□□□□ 0.77
LRRK2Q5S007 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC19.86■□□□□ 0.77
LRRK2Q5S007 SHOX2-201ENST00000389589 2072 ntAPPRIS P3 TSL 1 (best) BASIC19.86■□□□□ 0.77
LRRK2Q5S007 PQLC1-202ENST00000357575 2475 ntAPPRIS ALT1 TSL 5 BASIC19.86■□□□□ 0.77
LRRK2Q5S007 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
LRRK2Q5S007 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC19.86■□□□□ 0.77
LRRK2Q5S007 LHPP-203ENST00000392757 840 ntTSL 3 BASIC19.86■□□□□ 0.77
LRRK2Q5S007 KRT19P1-201ENST00000405746 1186 ntBASIC19.86■□□□□ 0.77
LRRK2Q5S007 KRT18P11-201ENST00000435214 1283 ntBASIC19.86■□□□□ 0.77
LRRK2Q5S007 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC19.86■□□□□ 0.77
LRRK2Q5S007 PPP1R3F-205ENST00000495799 1537 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
LRRK2Q5S007 MXRA7-202ENST00000375036 1950 ntAPPRIS ALT2 TSL 2 BASIC19.86■□□□□ 0.77
LRRK2Q5S007 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
LRRK2Q5S007 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC19.86■□□□□ 0.77
LRRK2Q5S007 MTCH1-201ENST00000373616 2006 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
LRRK2Q5S007 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
LRRK2Q5S007 METTL26-203ENST00000397664 604 ntTSL 2 BASIC19.85■□□□□ 0.77
LRRK2Q5S007 FAM201B-201ENST00000458407 597 ntBASIC19.85■□□□□ 0.77
LRRK2Q5S007 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC19.85■□□□□ 0.77
LRRK2Q5S007 TCF24-201ENST00000563496 2450 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
LRRK2Q5S007 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC19.85■□□□□ 0.77
LRRK2Q5S007 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
LRRK2Q5S007 C2CD4D-201ENST00000454109 1757 ntAPPRIS P1 TSL 2 BASIC19.85■□□□□ 0.77
LRRK2Q5S007 RUNDC3A-201ENST00000225441 1821 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
LRRK2Q5S007 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
LRRK2Q5S007 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC19.85■□□□□ 0.77
LRRK2Q5S007 FOXA2-202ENST00000419308 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
LRRK2Q5S007 GTF2E2-201ENST00000355904 1762 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
LRRK2Q5S007 AC097639.1-201ENST00000565519 1891 ntBASIC19.85■□□□□ 0.77
LRRK2Q5S007 AC096887.2-201ENST00000623443 1957 ntBASIC19.85■□□□□ 0.77
LRRK2Q5S007 AP004607.4-201ENST00000530158 1459 ntBASIC19.84■□□□□ 0.77
LRRK2Q5S007 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
LRRK2Q5S007 SDS-201ENST00000257549 1606 ntAPPRIS P1 TSL 2 BASIC19.84■□□□□ 0.77
LRRK2Q5S007 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
LRRK2Q5S007 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC19.84■□□□□ 0.77
LRRK2Q5S007 METTL15-202ENST00000403099 795 ntTSL 5 BASIC19.84■□□□□ 0.77
LRRK2Q5S007 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC19.84■□□□□ 0.77
LRRK2Q5S007 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC19.84■□□□□ 0.77
LRRK2Q5S007 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
LRRK2Q5S007 CEND1-201ENST00000330106 1649 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
LRRK2Q5S007 ACAA1-220ENST00000627515 1862 ntTSL 5 BASIC19.84■□□□□ 0.77
LRRK2Q5S007 UCK1-204ENST00000372215 2167 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
LRRK2Q5S007 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
LRRK2Q5S007 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
LRRK2Q5S007 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.77
LRRK2Q5S007 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.77
LRRK2Q5S007 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
LRRK2Q5S007 SLC29A4P1-201ENST00000398760 971 ntBASIC19.83■□□□□ 0.76
LRRK2Q5S007 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
LRRK2Q5S007 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC19.82■□□□□ 0.76
LRRK2Q5S007 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC19.82■□□□□ 0.76
LRRK2Q5S007 AL050303.2-201ENST00000619798 666 ntBASIC19.82■□□□□ 0.76
LRRK2Q5S007 ARTN-203ENST00000414809 1943 ntAPPRIS P4 TSL 3 BASIC19.82■□□□□ 0.76
LRRK2Q5S007 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
LRRK2Q5S007 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
LRRK2Q5S007 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC19.82■□□□□ 0.76
LRRK2Q5S007 DLK2-202ENST00000372485 1572 ntAPPRIS ALT1 TSL 5 BASIC19.82■□□□□ 0.76
LRRK2Q5S007 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC19.82■□□□□ 0.76
LRRK2Q5S007 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
LRRK2Q5S007 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
LRRK2Q5S007 C11orf80-218ENST00000540737 1786 ntAPPRIS ALT2 TSL 2 BASIC19.81■□□□□ 0.76
LRRK2Q5S007 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC19.81■□□□□ 0.76
LRRK2Q5S007 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
LRRK2Q5S007 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC19.81■□□□□ 0.76
LRRK2Q5S007 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
LRRK2Q5S007 ANKS3-203ENST00000450067 2272 ntTSL 5 BASIC19.81■□□□□ 0.76
LRRK2Q5S007 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
LRRK2Q5S007 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC19.81■□□□□ 0.76
LRRK2Q5S007 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC19.81■□□□□ 0.76
LRRK2Q5S007 YRDC-201ENST00000373044 1826 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
LRRK2Q5S007 HDHD5-202ENST00000336737 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
LRRK2Q5S007 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC19.81■□□□□ 0.76
LRRK2Q5S007 SAC3D1-201ENST00000398846 1566 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
LRRK2Q5S007 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC19.8■□□□□ 0.76
LRRK2Q5S007 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
LRRK2Q5S007 SSNA1-201ENST00000322310 896 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
LRRK2Q5S007 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
LRRK2Q5S007 MATK-204ENST00000585778 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 19.7 ms