Protein–RNA interactions for Protein: Q02539

HIST1H1A, Histone H1.1, humanhuman

Predicted RBP Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H1AQ02539 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
HIST1H1AQ02539 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
HIST1H1AQ02539 STK32C-205ENST00000456004 607 ntTSL 2 BASIC17.08■□□□□ 0.32
HIST1H1AQ02539 AC120024.1-201ENST00000562672 995 ntBASIC17.08■□□□□ 0.32
HIST1H1AQ02539 MMP25-AS1-209ENST00000576250 779 ntTSL 5 BASIC17.08■□□□□ 0.32
HIST1H1AQ02539 THA1P-201ENST00000590384 1145 ntBASIC17.08■□□□□ 0.32
HIST1H1AQ02539 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
HIST1H1AQ02539 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
HIST1H1AQ02539 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
HIST1H1AQ02539 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
HIST1H1AQ02539 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC17.07■□□□□ 0.32
HIST1H1AQ02539 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
HIST1H1AQ02539 CITED4-201ENST00000372638 1316 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
HIST1H1AQ02539 BEX3-202ENST00000372634 753 ntTSL 2 BASIC17.07■□□□□ 0.32
HIST1H1AQ02539 ZSCAN1-202ENST00000391700 952 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
HIST1H1AQ02539 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
HIST1H1AQ02539 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC17.07■□□□□ 0.32
HIST1H1AQ02539 SSX2IP-209ENST00000603677 1149 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
HIST1H1AQ02539 ATXN3-252ENST00000620536 1044 ntTSL 5 BASIC17.07■□□□□ 0.32
HIST1H1AQ02539 ATXN3-253ENST00000621269 936 ntTSL 5 BASIC17.07■□□□□ 0.32
HIST1H1AQ02539 AC012354.3-201ENST00000623734 483 ntBASIC17.07■□□□□ 0.32
HIST1H1AQ02539 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
HIST1H1AQ02539 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC17.07■□□□□ 0.32
HIST1H1AQ02539 G6PD-202ENST00000393562 2631 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
HIST1H1AQ02539 G6PD-211ENST00000621232 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
HIST1H1AQ02539 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
HIST1H1AQ02539 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
HIST1H1AQ02539 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC17.06■□□□□ 0.32
HIST1H1AQ02539 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC17.06■□□□□ 0.32
HIST1H1AQ02539 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
HIST1H1AQ02539 IDNK-201ENST00000376417 511 ntTSL 5 BASIC17.06■□□□□ 0.32
HIST1H1AQ02539 IDNK-202ENST00000376419 692 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
HIST1H1AQ02539 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
HIST1H1AQ02539 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
HIST1H1AQ02539 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
HIST1H1AQ02539 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC17.06■□□□□ 0.32
HIST1H1AQ02539 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
HIST1H1AQ02539 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
HIST1H1AQ02539 SLC25A24-204ENST00000569674 2357 ntBASIC17.06■□□□□ 0.32
HIST1H1AQ02539 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
HIST1H1AQ02539 RBM4B-203ENST00000525754 2339 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
HIST1H1AQ02539 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
HIST1H1AQ02539 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC17.05■□□□□ 0.32
HIST1H1AQ02539 ZFAND2B-201ENST00000289528 1314 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
HIST1H1AQ02539 USP48-205ENST00000421625 2818 ntTSL 2 BASIC17.05■□□□□ 0.32
HIST1H1AQ02539 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC17.05■□□□□ 0.32
HIST1H1AQ02539 GUK1-208ENST00000366728 842 ntTSL 2 BASIC17.05■□□□□ 0.32
HIST1H1AQ02539 VSTM2A-202ENST00000402613 1076 ntTSL 2 BASIC17.05■□□□□ 0.32
HIST1H1AQ02539 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC17.05■□□□□ 0.32
HIST1H1AQ02539 ST8SIA6-201ENST00000377602 2276 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
HIST1H1AQ02539 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC17.05■□□□□ 0.32
HIST1H1AQ02539 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
HIST1H1AQ02539 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
HIST1H1AQ02539 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
HIST1H1AQ02539 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC17.05■□□□□ 0.32
HIST1H1AQ02539 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
HIST1H1AQ02539 EFS-203ENST00000429593 2610 ntTSL 2 BASIC17.04■□□□□ 0.32
HIST1H1AQ02539 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC17.04■□□□□ 0.32
HIST1H1AQ02539 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC17.04■□□□□ 0.32
HIST1H1AQ02539 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
HIST1H1AQ02539 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
HIST1H1AQ02539 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC17.04■□□□□ 0.32
HIST1H1AQ02539 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
HIST1H1AQ02539 H2AFY-204ENST00000423969 924 ntTSL 2 BASIC17.04■□□□□ 0.32
HIST1H1AQ02539 QDPR-202ENST00000428702 1278 ntTSL 2 BASIC17.04■□□□□ 0.32
HIST1H1AQ02539 CCDC37-AS1-202ENST00000506660 986 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
HIST1H1AQ02539 SLC52A2-211ENST00000532887 2147 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
HIST1H1AQ02539 ZNF606-203ENST00000547121 1196 ntTSL 2 BASIC17.04■□□□□ 0.32
HIST1H1AQ02539 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC17.04■□□□□ 0.32
HIST1H1AQ02539 PVT1_1.1-201ENST00000615125 194 ntBASIC17.04■□□□□ 0.32
HIST1H1AQ02539 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
HIST1H1AQ02539 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
HIST1H1AQ02539 DTNB-206ENST00000404103 2384 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
HIST1H1AQ02539 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
HIST1H1AQ02539 C9orf163-202ENST00000624034 2573 ntBASIC17.04■□□□□ 0.32
HIST1H1AQ02539 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
HIST1H1AQ02539 EI24-213ENST00000618552 1747 ntTSL 5 BASIC17.04■□□□□ 0.32
HIST1H1AQ02539 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
HIST1H1AQ02539 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
HIST1H1AQ02539 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
HIST1H1AQ02539 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
HIST1H1AQ02539 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
HIST1H1AQ02539 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
HIST1H1AQ02539 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
HIST1H1AQ02539 SLC2A8-203ENST00000373371 2172 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
HIST1H1AQ02539 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
HIST1H1AQ02539 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC17.03■□□□□ 0.32
HIST1H1AQ02539 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
HIST1H1AQ02539 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
HIST1H1AQ02539 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
HIST1H1AQ02539 AC131274.2-201ENST00000580697 1507 ntBASIC17.03■□□□□ 0.32
HIST1H1AQ02539 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC17.03■□□□□ 0.32
HIST1H1AQ02539 TMEM102-202ENST00000396568 1962 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
HIST1H1AQ02539 AC005540.1-201ENST00000413911 919 ntTSL 3 BASIC17.03■□□□□ 0.32
HIST1H1AQ02539 HAGHL-205ENST00000561546 1041 ntTSL 2 BASIC17.03■□□□□ 0.32
HIST1H1AQ02539 AL033527.3-201ENST00000566366 1196 ntBASIC17.03■□□□□ 0.32
HIST1H1AQ02539 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
HIST1H1AQ02539 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
HIST1H1AQ02539 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
HIST1H1AQ02539 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 65.2 ms