Protein–RNA interactions for Protein: P78324

SIRPA, Tyrosine-protein phosphatase non-receptor type substrate 1, humanhuman

Predictions only

Length 504 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIRPAP78324 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
SIRPAP78324 AC131274.2-201ENST00000580697 1507 ntBASIC20.44■□□□□ 0.86
SIRPAP78324 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
SIRPAP78324 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC20.44■□□□□ 0.86
SIRPAP78324 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC20.44■□□□□ 0.86
SIRPAP78324 AL136116.3-201ENST00000402907 1138 ntBASIC20.44■□□□□ 0.86
SIRPAP78324 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC20.44■□□□□ 0.86
SIRPAP78324 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC20.44■□□□□ 0.86
SIRPAP78324 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC20.44■□□□□ 0.86
SIRPAP78324 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC20.44■□□□□ 0.86
SIRPAP78324 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
SIRPAP78324 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
SIRPAP78324 ST8SIA6-201ENST00000377602 2276 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
SIRPAP78324 RBM4B-203ENST00000525754 2339 ntAPPRIS P1 TSL 2 BASIC20.44■□□□□ 0.86
SIRPAP78324 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC20.44■□□□□ 0.86
SIRPAP78324 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC20.44■□□□□ 0.86
SIRPAP78324 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC20.43■□□□□ 0.86
SIRPAP78324 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
SIRPAP78324 KISS1R-201ENST00000234371 1625 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
SIRPAP78324 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC20.43■□□□□ 0.86
SIRPAP78324 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC20.43■□□□□ 0.86
SIRPAP78324 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
SIRPAP78324 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC20.43■□□□□ 0.86
SIRPAP78324 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC20.43■□□□□ 0.86
SIRPAP78324 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
SIRPAP78324 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC20.42■□□□□ 0.86
SIRPAP78324 STK32C-205ENST00000456004 607 ntTSL 2 BASIC20.42■□□□□ 0.86
SIRPAP78324 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC20.42■□□□□ 0.86
SIRPAP78324 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
SIRPAP78324 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC20.42■□□□□ 0.86
SIRPAP78324 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC20.42■□□□□ 0.86
SIRPAP78324 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
SIRPAP78324 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
SIRPAP78324 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC20.41■□□□□ 0.86
SIRPAP78324 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
SIRPAP78324 CRYAA-201ENST00000291554 1139 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
SIRPAP78324 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
SIRPAP78324 ZNRF1-205ENST00000566250 1069 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
SIRPAP78324 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
SIRPAP78324 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
SIRPAP78324 RUNDC3A-202ENST00000426726 2048 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
SIRPAP78324 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC20.41■□□□□ 0.86
SIRPAP78324 HTATSF1-201ENST00000218364 2775 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
SIRPAP78324 AKT1-201ENST00000349310 2866 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
SIRPAP78324 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC20.4■□□□□ 0.86
SIRPAP78324 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC20.4■□□□□ 0.86
SIRPAP78324 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
SIRPAP78324 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC20.4■□□□□ 0.86
SIRPAP78324 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC20.4■□□□□ 0.86
SIRPAP78324 AL022069.1-201ENST00000568025 1636 ntBASIC20.4■□□□□ 0.86
SIRPAP78324 GPX4-213ENST00000622390 1002 ntTSL 5 BASIC20.4■□□□□ 0.86
SIRPAP78324 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC20.39■□□□□ 0.86
SIRPAP78324 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC20.39■□□□□ 0.85
SIRPAP78324 IL17RE-201ENST00000383814 2704 ntAPPRIS P2 TSL 1 (best) BASIC20.39■□□□□ 0.85
SIRPAP78324 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
SIRPAP78324 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
SIRPAP78324 AC136475.3-202ENST00000534742 812 ntTSL 2 BASIC20.39■□□□□ 0.85
SIRPAP78324 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC20.39■□□□□ 0.85
SIRPAP78324 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
SIRPAP78324 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC20.39■□□□□ 0.85
SIRPAP78324 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC20.39■□□□□ 0.85
SIRPAP78324 SLC30A2-201ENST00000374276 2494 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
SIRPAP78324 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
SIRPAP78324 NKX2-1-201ENST00000354822 2191 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
SIRPAP78324 SLC2A8-203ENST00000373371 2172 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
SIRPAP78324 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC20.38■□□□□ 0.85
SIRPAP78324 QDPR-206ENST00000508623 601 ntTSL 3 BASIC20.38■□□□□ 0.85
SIRPAP78324 MIR4466-201ENST00000606121 54 ntBASIC20.38■□□□□ 0.85
SIRPAP78324 KCNK13-201ENST00000282146 2522 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
SIRPAP78324 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC20.38■□□□□ 0.85
SIRPAP78324 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
SIRPAP78324 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC20.38■□□□□ 0.85
SIRPAP78324 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
SIRPAP78324 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC20.37■□□□□ 0.85
SIRPAP78324 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC20.37■□□□□ 0.85
SIRPAP78324 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
SIRPAP78324 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC20.37■□□□□ 0.85
SIRPAP78324 REST-206ENST00000612429 1376 ntTSL 5 BASIC20.37■□□□□ 0.85
SIRPAP78324 REST-207ENST00000616975 1370 ntTSL 5 BASIC20.37■□□□□ 0.85
SIRPAP78324 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
SIRPAP78324 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC20.37■□□□□ 0.85
SIRPAP78324 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
SIRPAP78324 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
SIRPAP78324 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC20.37■□□□□ 0.85
SIRPAP78324 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC20.37■□□□□ 0.85
SIRPAP78324 RASSF1-AS1-201ENST00000629828 790 ntBASIC20.37■□□□□ 0.85
SIRPAP78324 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC20.37■□□□□ 0.85
SIRPAP78324 PPIL6-203ENST00000440797 1693 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
SIRPAP78324 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
SIRPAP78324 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
SIRPAP78324 HSD11B1L-206ENST00000423665 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
SIRPAP78324 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC20.37■□□□□ 0.85
SIRPAP78324 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
SIRPAP78324 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
SIRPAP78324 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
SIRPAP78324 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC20.36■□□□□ 0.85
SIRPAP78324 CDR2-201ENST00000268383 2702 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
SIRPAP78324 AC005703.6-201ENST00000623265 1329 ntBASIC20.36■□□□□ 0.85
SIRPAP78324 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
SIRPAP78324 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 32.6 ms