Protein–RNA interactions for Protein: P62987

UBA52, Ubiquitin-60S ribosomal protein L40, humanhuman

Known RBP Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBA52P62987 GNPTG-201ENST00000204679 1983 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
UBA52P62987 MRPS7-203ENST00000579002 1638 ntTSL 2 BASIC19.23■□□□□ 0.67
UBA52P62987 LINC00526-201ENST00000581067 1875 ntBASIC19.23■□□□□ 0.67
UBA52P62987 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC19.23■□□□□ 0.67
UBA52P62987 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
UBA52P62987 ERO1A-211ENST00000629528 998 ntTSL 5 BASIC19.23■□□□□ 0.67
UBA52P62987 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
UBA52P62987 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC19.23■□□□□ 0.67
UBA52P62987 TAZ-216ENST00000613002 1485 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
UBA52P62987 CHKA-202ENST00000356135 1755 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
UBA52P62987 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
UBA52P62987 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC19.22■□□□□ 0.67
UBA52P62987 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC19.22■□□□□ 0.67
UBA52P62987 SLC25A24-204ENST00000569674 2357 ntBASIC19.22■□□□□ 0.67
UBA52P62987 TMEM203-201ENST00000343666 1557 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
UBA52P62987 DOK3-205ENST00000501403 1872 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
UBA52P62987 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
UBA52P62987 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
UBA52P62987 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
UBA52P62987 MIR935-201ENST00000401179 91 ntBASIC19.21■□□□□ 0.67
UBA52P62987 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC19.21■□□□□ 0.67
UBA52P62987 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC19.21■□□□□ 0.67
UBA52P62987 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC19.21■□□□□ 0.67
UBA52P62987 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC19.2■□□□□ 0.66
UBA52P62987 EVA1C-203ENST00000401402 1558 ntTSL 5 BASIC19.2■□□□□ 0.66
UBA52P62987 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
UBA52P62987 TSPY9P-201ENST00000440215 945 ntBASIC19.2■□□□□ 0.66
UBA52P62987 TSPY11P-201ENST00000442607 1045 ntBASIC19.2■□□□□ 0.66
UBA52P62987 AC137630.3-201ENST00000607245 391 ntBASIC19.2■□□□□ 0.66
UBA52P62987 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
UBA52P62987 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
UBA52P62987 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
UBA52P62987 COMT-204ENST00000403710 1548 ntAPPRIS P3 TSL 5 BASIC19.2■□□□□ 0.66
UBA52P62987 MXD3-201ENST00000423571 1534 ntTSL 2 BASIC19.2■□□□□ 0.66
UBA52P62987 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
UBA52P62987 ARHGEF9-210ENST00000623517 2143 ntTSL 2 BASIC19.19■□□□□ 0.66
UBA52P62987 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
UBA52P62987 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC19.19■□□□□ 0.66
UBA52P62987 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
UBA52P62987 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC19.19■□□□□ 0.66
UBA52P62987 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC19.19■□□□□ 0.66
UBA52P62987 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
UBA52P62987 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
UBA52P62987 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC19.19■□□□□ 0.66
UBA52P62987 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
UBA52P62987 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
UBA52P62987 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
UBA52P62987 ATP13A2-215ENST00000617114 1723 ntTSL 5 BASIC19.19■□□□□ 0.66
UBA52P62987 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
UBA52P62987 HMG20B-202ENST00000333651 1596 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
UBA52P62987 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC19.19■□□□□ 0.66
UBA52P62987 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
UBA52P62987 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
UBA52P62987 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
UBA52P62987 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
UBA52P62987 PAIP1-208ENST00000514514 1603 ntTSL 5 BASIC19.18■□□□□ 0.66
UBA52P62987 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
UBA52P62987 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
UBA52P62987 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
UBA52P62987 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
UBA52P62987 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC19.18■□□□□ 0.66
UBA52P62987 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC19.18■□□□□ 0.66
UBA52P62987 AC120024.1-201ENST00000562672 995 ntBASIC19.18■□□□□ 0.66
UBA52P62987 MMP25-AS1-209ENST00000576250 779 ntTSL 5 BASIC19.18■□□□□ 0.66
UBA52P62987 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
UBA52P62987 AKT1S1-201ENST00000344175 1760 ntAPPRIS P1 TSL 3 BASIC19.18■□□□□ 0.66
UBA52P62987 DGCR6-208ENST00000608842 1837 ntTSL 2 BASIC19.18■□□□□ 0.66
UBA52P62987 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
UBA52P62987 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
UBA52P62987 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC19.17■□□□□ 0.66
UBA52P62987 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC19.17■□□□□ 0.66
UBA52P62987 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC19.17■□□□□ 0.66
UBA52P62987 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC19.17■□□□□ 0.66
UBA52P62987 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC19.17■□□□□ 0.66
UBA52P62987 TYMP-203ENST00000395680 1608 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
UBA52P62987 TYMP-204ENST00000395681 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
UBA52P62987 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
UBA52P62987 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
UBA52P62987 DNAJB11-201ENST00000265028 1688 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
UBA52P62987 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC19.16■□□□□ 0.66
UBA52P62987 FAM162B-201ENST00000368557 1036 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
UBA52P62987 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC19.16■□□□□ 0.66
UBA52P62987 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
UBA52P62987 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC19.16■□□□□ 0.66
UBA52P62987 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
UBA52P62987 SLC6A10P-202ENST00000431994 2058 ntBASIC19.16■□□□□ 0.66
UBA52P62987 AC021242.3-201ENST00000607598 1377 ntBASIC19.16■□□□□ 0.66
UBA52P62987 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC19.16■□□□□ 0.66
UBA52P62987 PPM1J-201ENST00000309276 1863 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
UBA52P62987 PKMYT1-211ENST00000573944 1891 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
UBA52P62987 AC007375.3-201ENST00000600936 2314 ntBASIC19.16■□□□□ 0.66
UBA52P62987 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
UBA52P62987 CDK2AP1-201ENST00000261692 1625 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
UBA52P62987 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
UBA52P62987 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
UBA52P62987 WWC2-AS2-201ENST00000578387 2183 ntBASIC19.15■□□□□ 0.66
UBA52P62987 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
UBA52P62987 SHD-204ENST00000599689 1729 ntTSL 5 BASIC19.15■□□□□ 0.66
UBA52P62987 PRELID1-201ENST00000303204 1261 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
UBA52P62987 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC19.15■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 28.1 ms