Protein–RNA interactions for Protein: P62068

USP46, Ubiquitin carboxyl-terminal hydrolase 46, humanhuman

Predictions only

Length 366 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP46P62068 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
USP46P62068 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
USP46P62068 PREB-202ENST00000406567 1910 ntTSL 5 BASIC23.69■■□□□ 1.38
USP46P62068 SUDS3P1-201ENST00000505831 966 ntBASIC23.69■■□□□ 1.38
USP46P62068 PINK1-201ENST00000321556 2660 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
USP46P62068 CLPTM1-201ENST00000337392 2604 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
USP46P62068 NRG1-210ENST00000520407 1955 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
USP46P62068 TMEM185A-208ENST00000611119 2662 ntTSL 2 BASIC23.68■■□□□ 1.38
USP46P62068 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
USP46P62068 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC23.68■■□□□ 1.38
USP46P62068 AC241377.3-202ENST00000626088 1088 ntBASIC23.68■■□□□ 1.38
USP46P62068 AC241585.3-202ENST00000628937 1088 ntBASIC23.68■■□□□ 1.38
USP46P62068 AC245100.8-202ENST00000629247 1058 ntBASIC23.68■■□□□ 1.38
USP46P62068 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC23.68■■□□□ 1.38
USP46P62068 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC23.68■■□□□ 1.38
USP46P62068 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC23.67■■□□□ 1.38
USP46P62068 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
USP46P62068 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC23.67■■□□□ 1.38
USP46P62068 ZC3H14-202ENST00000302216 2560 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
USP46P62068 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
USP46P62068 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC23.67■■□□□ 1.38
USP46P62068 SLC22A31-206ENST00000614943 1860 ntTSL 5 BASIC23.67■■□□□ 1.38
USP46P62068 ASB1-202ENST00000409297 878 ntTSL 5 BASIC23.67■■□□□ 1.38
USP46P62068 MIR4767-201ENST00000582827 78 ntBASIC23.67■■□□□ 1.38
USP46P62068 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC23.67■■□□□ 1.38
USP46P62068 DLG3-203ENST00000374360 5905 ntAPPRIS P2 TSL 1 (best) BASIC23.67■■□□□ 1.38
USP46P62068 ZFYVE28-202ENST00000503000 1874 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
USP46P62068 PTH1R-202ENST00000418619 2070 ntAPPRIS P1 TSL 5 BASIC23.66■■□□□ 1.38
USP46P62068 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC23.66■■□□□ 1.38
USP46P62068 EDA-201ENST00000338901 1233 ntBASIC23.66■■□□□ 1.38
USP46P62068 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
USP46P62068 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
USP46P62068 PTMA-205ENST00000410064 814 ntTSL 2 BASIC23.66■■□□□ 1.38
USP46P62068 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC23.66■■□□□ 1.38
USP46P62068 AC009086.3-201ENST00000623486 1008 ntBASIC23.66■■□□□ 1.38
USP46P62068 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
USP46P62068 ABHD17C-201ENST00000258884 2368 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
USP46P62068 ZNF767P-202ENST00000472212 2100 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
USP46P62068 ZNRF1-201ENST00000320619 2479 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
USP46P62068 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC23.65■■□□□ 1.38
USP46P62068 GJD4-201ENST00000321660 1580 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
USP46P62068 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
USP46P62068 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC23.65■■□□□ 1.38
USP46P62068 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC23.65■■□□□ 1.38
USP46P62068 AC142381.2-201ENST00000566120 298 ntBASIC23.65■■□□□ 1.38
USP46P62068 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC23.65■■□□□ 1.38
USP46P62068 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC23.65■■□□□ 1.38
USP46P62068 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC23.64■■□□□ 1.38
USP46P62068 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC23.64■■□□□ 1.38
USP46P62068 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC23.64■■□□□ 1.37
USP46P62068 MIR3181-201ENST00000578512 73 ntBASIC23.64■■□□□ 1.37
USP46P62068 GRAMD4P4-201ENST00000613563 1115 ntBASIC23.64■■□□□ 1.37
USP46P62068 AL355001.2-201ENST00000620617 1191 ntBASIC23.64■■□□□ 1.37
USP46P62068 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC23.64■■□□□ 1.37
USP46P62068 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
USP46P62068 LRRC24-201ENST00000529415 1758 ntAPPRIS P2 TSL 1 (best) BASIC23.64■■□□□ 1.37
USP46P62068 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC23.64■■□□□ 1.37
USP46P62068 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC23.64■■□□□ 1.37
USP46P62068 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC23.64■■□□□ 1.37
USP46P62068 BIN1-207ENST00000357970 2497 ntTSL 1 (best) BASIC23.64■■□□□ 1.37
USP46P62068 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC23.63■■□□□ 1.37
USP46P62068 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC23.63■■□□□ 1.37
USP46P62068 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC23.63■■□□□ 1.37
USP46P62068 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC23.63■■□□□ 1.37
USP46P62068 ABCB10P4-201ENST00000566803 2184 ntBASIC23.63■■□□□ 1.37
USP46P62068 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC23.63■■□□□ 1.37
USP46P62068 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC23.63■■□□□ 1.37
USP46P62068 GTSE1-AS1-202ENST00000623117 1518 ntBASIC23.63■■□□□ 1.37
USP46P62068 TTLL1-201ENST00000266254 1645 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
USP46P62068 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC23.62■■□□□ 1.37
USP46P62068 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
USP46P62068 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC23.62■■□□□ 1.37
USP46P62068 RPIA-201ENST00000283646 1848 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
USP46P62068 EBPL-204ENST00000378272 766 ntTSL 3 BASIC23.62■■□□□ 1.37
USP46P62068 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC23.62■■□□□ 1.37
USP46P62068 AF213884.3-201ENST00000563833 479 ntBASIC23.62■■□□□ 1.37
USP46P62068 AL138724.1-201ENST00000606771 1088 ntBASIC23.62■■□□□ 1.37
USP46P62068 AC011298.3-201ENST00000615796 283 ntBASIC23.62■■□□□ 1.37
USP46P62068 AL136967.2-201ENST00000623968 743 ntBASIC23.62■■□□□ 1.37
USP46P62068 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
USP46P62068 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC23.62■■□□□ 1.37
USP46P62068 PICALM-202ENST00000393346 2340 ntAPPRIS P3 TSL 1 (best) BASIC23.61■■□□□ 1.37
USP46P62068 EPB41L4B-202ENST00000374566 5800 ntAPPRIS P4 TSL 1 (best) BASIC23.61■■□□□ 1.37
USP46P62068 ACAA1-219ENST00000625927 1760 ntTSL 5 BASIC23.61■■□□□ 1.37
USP46P62068 HES6-206ENST00000409574 738 ntTSL 2 BASIC23.61■■□□□ 1.37
USP46P62068 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC23.61■■□□□ 1.37
USP46P62068 AP001330.3-201ENST00000520123 633 ntBASIC23.61■■□□□ 1.37
USP46P62068 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC23.61■■□□□ 1.37
USP46P62068 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
USP46P62068 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
USP46P62068 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
USP46P62068 AC093323.1-202ENST00000635031 2045 ntBASIC23.6■■□□□ 1.37
USP46P62068 PON2-217ENST00000633192 1876 ntTSL 1 (best) BASIC23.6■■□□□ 1.37
USP46P62068 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
USP46P62068 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC23.6■■□□□ 1.37
USP46P62068 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC23.6■■□□□ 1.37
USP46P62068 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC23.6■■□□□ 1.37
USP46P62068 MIR935-201ENST00000401179 91 ntBASIC23.6■■□□□ 1.37
USP46P62068 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC23.6■■□□□ 1.37
USP46P62068 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC23.6■■□□□ 1.37
Retrieved 100 of 98,524 protein–RNA pairs in 25.4 ms