Protein–RNA interactions for Protein: P57055

RIPPLY3, Protein ripply3, humanhuman

Predictions only

Length 190 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIPPLY3P57055 RCOR3-202ENST00000367006 2525 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
RIPPLY3P57055 TMEM200C-201ENST00000383490 1920 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
RIPPLY3P57055 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC18.63■□□□□ 0.57
RIPPLY3P57055 DUSP5P2-201ENST00000426873 1033 ntBASIC18.63■□□□□ 0.57
RIPPLY3P57055 DUX4L16-201ENST00000555130 1264 ntBASIC18.63■□□□□ 0.57
RIPPLY3P57055 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC18.63■□□□□ 0.57
RIPPLY3P57055 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC18.63■□□□□ 0.57
RIPPLY3P57055 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC18.63■□□□□ 0.57
RIPPLY3P57055 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC18.63■□□□□ 0.57
RIPPLY3P57055 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC18.63■□□□□ 0.57
RIPPLY3P57055 TMEM150A-201ENST00000306353 1484 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
RIPPLY3P57055 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC18.63■□□□□ 0.57
RIPPLY3P57055 RDX-210ENST00000530301 1549 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
RIPPLY3P57055 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
RIPPLY3P57055 EFEMP2-201ENST00000307998 2034 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
RIPPLY3P57055 ANKRD53-201ENST00000272421 2185 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
RIPPLY3P57055 D2HGDH-203ENST00000403782 2208 ntTSL 2 BASIC18.62■□□□□ 0.57
RIPPLY3P57055 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
RIPPLY3P57055 KRT18P11-201ENST00000435214 1283 ntBASIC18.62■□□□□ 0.57
RIPPLY3P57055 AC098590.1-201ENST00000468126 897 ntBASIC18.62■□□□□ 0.57
RIPPLY3P57055 RNF146-206ENST00000480444 843 ntTSL 2 BASIC18.62■□□□□ 0.57
RIPPLY3P57055 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC18.62■□□□□ 0.57
RIPPLY3P57055 AL138781.1-201ENST00000566567 1274 ntBASIC18.62■□□□□ 0.57
RIPPLY3P57055 WDR88-203ENST00000592765 651 ntTSL 5 BASIC18.62■□□□□ 0.57
RIPPLY3P57055 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
RIPPLY3P57055 RNF19B-202ENST00000356990 2598 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
RIPPLY3P57055 TMEM64-201ENST00000418210 4663 ntTSL 2 BASIC18.62■□□□□ 0.57
RIPPLY3P57055 EPM2A-208ENST00000618445 1694 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
RIPPLY3P57055 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
RIPPLY3P57055 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
RIPPLY3P57055 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
RIPPLY3P57055 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
RIPPLY3P57055 AP005435.1-201ENST00000529293 1178 ntBASIC18.61■□□□□ 0.57
RIPPLY3P57055 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
RIPPLY3P57055 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC18.61■□□□□ 0.57
RIPPLY3P57055 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC18.61■□□□□ 0.57
RIPPLY3P57055 AC073912.3-201ENST00000624414 853 ntBASIC18.61■□□□□ 0.57
RIPPLY3P57055 DVL3-201ENST00000313143 5254 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
RIPPLY3P57055 ARL2-SNX15-201ENST00000301886 2392 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
RIPPLY3P57055 FOXF2-201ENST00000259806 2187 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
RIPPLY3P57055 HIST2H3C-201ENST00000369158 1656 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
RIPPLY3P57055 HIST2H3A-201ENST00000403683 1656 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
RIPPLY3P57055 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
RIPPLY3P57055 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
RIPPLY3P57055 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
RIPPLY3P57055 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC18.6■□□□□ 0.57
RIPPLY3P57055 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
RIPPLY3P57055 AC073210.2-201ENST00000430369 194 ntBASIC18.6■□□□□ 0.57
RIPPLY3P57055 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
RIPPLY3P57055 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
RIPPLY3P57055 KRT18P61-201ENST00000585825 1298 ntBASIC18.6■□□□□ 0.57
RIPPLY3P57055 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC18.6■□□□□ 0.57
RIPPLY3P57055 TFG-210ENST00000620299 1289 ntTSL 5 BASIC18.6■□□□□ 0.57
RIPPLY3P57055 CTF1-202ENST00000395019 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC18.6■□□□□ 0.57
RIPPLY3P57055 UBALD2-201ENST00000327490 1593 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
RIPPLY3P57055 C11orf95-202ENST00000433688 5716 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
RIPPLY3P57055 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
RIPPLY3P57055 NAPA-201ENST00000263354 1839 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
RIPPLY3P57055 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
RIPPLY3P57055 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC18.59■□□□□ 0.57
RIPPLY3P57055 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC18.59■□□□□ 0.57
RIPPLY3P57055 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
RIPPLY3P57055 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
RIPPLY3P57055 SMIM8-209ENST00000608868 815 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
RIPPLY3P57055 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC18.59■□□□□ 0.57
RIPPLY3P57055 CRACR2B-202ENST00000525077 1578 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
RIPPLY3P57055 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC18.58■□□□□ 0.57
RIPPLY3P57055 CCDC136-206ENST00000464832 1720 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.57
RIPPLY3P57055 ARMC10-204ENST00000425331 2443 ntTSL 2 BASIC18.58■□□□□ 0.57
RIPPLY3P57055 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
RIPPLY3P57055 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC18.58■□□□□ 0.56
RIPPLY3P57055 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC18.58■□□□□ 0.56
RIPPLY3P57055 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
RIPPLY3P57055 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC18.58■□□□□ 0.56
RIPPLY3P57055 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC18.58■□□□□ 0.56
RIPPLY3P57055 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC18.58■□□□□ 0.56
RIPPLY3P57055 ZNF74-204ENST00000405993 1839 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.56
RIPPLY3P57055 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
RIPPLY3P57055 LTK-203ENST00000453182 2412 ntTSL 2 BASIC18.57■□□□□ 0.56
RIPPLY3P57055 CPNE1-202ENST00000352393 2147 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
RIPPLY3P57055 CAPN10-203ENST00000352879 862 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
RIPPLY3P57055 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC18.57■□□□□ 0.56
RIPPLY3P57055 LBH-205ENST00000407930 756 ntTSL 2 BASIC18.57■□□□□ 0.56
RIPPLY3P57055 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC18.57■□□□□ 0.56
RIPPLY3P57055 GUSBP6-202ENST00000438529 1198 ntBASIC18.57■□□□□ 0.56
RIPPLY3P57055 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC18.57■□□□□ 0.56
RIPPLY3P57055 SLC7A5P2-201ENST00000553010 536 ntBASIC18.57■□□□□ 0.56
RIPPLY3P57055 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC18.57■□□□□ 0.56
RIPPLY3P57055 MIR3181-201ENST00000578512 73 ntBASIC18.57■□□□□ 0.56
RIPPLY3P57055 AL139393.2-201ENST00000608721 2025 ntBASIC18.57■□□□□ 0.56
RIPPLY3P57055 PLD4-201ENST00000392593 6515 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
RIPPLY3P57055 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
RIPPLY3P57055 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
RIPPLY3P57055 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
RIPPLY3P57055 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
RIPPLY3P57055 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
RIPPLY3P57055 CASP9-201ENST00000333868 2019 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
RIPPLY3P57055 OTUD5-208ENST00000610466 2487 ntTSL 5 BASIC18.56■□□□□ 0.56
RIPPLY3P57055 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
RIPPLY3P57055 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 55.9 ms