Protein–RNA interactions for Protein: P52435

POLR2J, DNA-directed RNA polymerase II subunit RPB11-a, humanhuman

Known RBP Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2JP52435 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
POLR2JP52435 AC079630.1-202ENST00000618127 1840 ntBASIC21.5■■□□□ 1.03
POLR2JP52435 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC21.5■■□□□ 1.03
POLR2JP52435 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC21.49■■□□□ 1.03
POLR2JP52435 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
POLR2JP52435 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
POLR2JP52435 AC127496.7-201ENST00000625110 1798 ntBASIC21.49■■□□□ 1.03
POLR2JP52435 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC21.49■■□□□ 1.03
POLR2JP52435 AC139795.1-202ENST00000500444 432 ntBASIC21.49■■□□□ 1.03
POLR2JP52435 TRIM52-AS1-202ENST00000507434 672 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
POLR2JP52435 CDKN2A-214ENST00000579755 1283 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
POLR2JP52435 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
POLR2JP52435 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
POLR2JP52435 TMEM171-202ENST00000454765 1535 ntAPPRIS P3 TSL 1 (best) BASIC21.49■■□□□ 1.03
POLR2JP52435 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC21.48■■□□□ 1.03
POLR2JP52435 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
POLR2JP52435 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC21.48■■□□□ 1.03
POLR2JP52435 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC21.48■■□□□ 1.03
POLR2JP52435 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC21.48■■□□□ 1.03
POLR2JP52435 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC21.48■■□□□ 1.03
POLR2JP52435 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC21.48■■□□□ 1.03
POLR2JP52435 ESRRAP2-201ENST00000418437 1549 ntBASIC21.48■■□□□ 1.03
POLR2JP52435 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC21.48■■□□□ 1.03
POLR2JP52435 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC21.48■■□□□ 1.03
POLR2JP52435 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC21.47■■□□□ 1.03
POLR2JP52435 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC21.47■■□□□ 1.03
POLR2JP52435 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC21.47■■□□□ 1.03
POLR2JP52435 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC21.47■■□□□ 1.03
POLR2JP52435 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC21.47■■□□□ 1.03
POLR2JP52435 ERFE-207ENST00000546354 1065 ntAPPRIS P2 TSL 1 (best) BASIC21.47■■□□□ 1.03
POLR2JP52435 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC21.47■■□□□ 1.03
POLR2JP52435 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
POLR2JP52435 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC21.47■■□□□ 1.03
POLR2JP52435 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
POLR2JP52435 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
POLR2JP52435 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
POLR2JP52435 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
POLR2JP52435 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
POLR2JP52435 AL121899.1-202ENST00000411839 536 ntTSL 5 BASIC21.46■■□□□ 1.03
POLR2JP52435 AC007383.2-202ENST00000435627 482 ntTSL 2 BASIC21.46■■□□□ 1.03
POLR2JP52435 GPRC5B-202ENST00000535671 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC21.46■■□□□ 1.03
POLR2JP52435 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC21.46■■□□□ 1.03
POLR2JP52435 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
POLR2JP52435 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC21.46■■□□□ 1.03
POLR2JP52435 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC21.46■■□□□ 1.03
POLR2JP52435 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC21.46■■□□□ 1.03
POLR2JP52435 R3HCC1-202ENST00000411463 1467 ntAPPRIS P5 TSL 5 BASIC21.45■■□□□ 1.03
POLR2JP52435 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.03
POLR2JP52435 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
POLR2JP52435 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC21.45■■□□□ 1.02
POLR2JP52435 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC21.45■■□□□ 1.02
POLR2JP52435 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC21.45■■□□□ 1.02
POLR2JP52435 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
POLR2JP52435 LY6H-201ENST00000342752 951 ntAPPRIS ALT2 TSL 1 (best) BASIC21.45■■□□□ 1.02
POLR2JP52435 C20orf24-203ENST00000373852 1059 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
POLR2JP52435 LY6H-202ENST00000414417 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC21.45■■□□□ 1.02
POLR2JP52435 LY6H-203ENST00000430474 925 ntAPPRIS P3 TSL 3 BASIC21.45■■□□□ 1.02
POLR2JP52435 DUX4L18-201ENST00000553347 1267 ntBASIC21.45■■□□□ 1.02
POLR2JP52435 AC120024.1-201ENST00000562672 995 ntBASIC21.45■■□□□ 1.02
POLR2JP52435 HSD17B1P1-201ENST00000590052 955 ntBASIC21.45■■□□□ 1.02
POLR2JP52435 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
POLR2JP52435 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
POLR2JP52435 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC21.45■■□□□ 1.02
POLR2JP52435 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
POLR2JP52435 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
POLR2JP52435 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC21.45■■□□□ 1.02
POLR2JP52435 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
POLR2JP52435 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
POLR2JP52435 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC21.44■■□□□ 1.02
POLR2JP52435 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC21.44■■□□□ 1.02
POLR2JP52435 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC21.44■■□□□ 1.02
POLR2JP52435 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC21.44■■□□□ 1.02
POLR2JP52435 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC21.44■■□□□ 1.02
POLR2JP52435 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
POLR2JP52435 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
POLR2JP52435 AC242852.2-201ENST00000615738 1807 ntBASIC21.44■■□□□ 1.02
POLR2JP52435 OXLD1-201ENST00000374741 620 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
POLR2JP52435 C5orf38-202ENST00000397835 681 ntAPPRIS ALT2 TSL 5 BASIC21.44■■□□□ 1.02
POLR2JP52435 GUCD1-207ENST00000447813 895 ntTSL 3 BASIC21.44■■□□□ 1.02
POLR2JP52435 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC21.44■■□□□ 1.02
POLR2JP52435 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
POLR2JP52435 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
POLR2JP52435 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
POLR2JP52435 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
POLR2JP52435 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC21.43■■□□□ 1.02
POLR2JP52435 PPP1R14A-201ENST00000301242 777 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
POLR2JP52435 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC21.43■■□□□ 1.02
POLR2JP52435 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC21.43■■□□□ 1.02
POLR2JP52435 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
POLR2JP52435 AF131216.4-201ENST00000638924 1588 ntBASIC21.43■■□□□ 1.02
POLR2JP52435 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
POLR2JP52435 SDHAF1-201ENST00000378887 1117 ntAPPRIS P1 BASIC21.42■■□□□ 1.02
POLR2JP52435 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
POLR2JP52435 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC21.42■■□□□ 1.02
POLR2JP52435 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
POLR2JP52435 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC21.42■■□□□ 1.02
POLR2JP52435 HOMER3-207ENST00000594794 903 ntTSL 5 BASIC21.42■■□□□ 1.02
POLR2JP52435 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
POLR2JP52435 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC21.42■■□□□ 1.02
POLR2JP52435 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC21.42■■□□□ 1.02
Retrieved 100 of 98,524 protein–RNA pairs in 13.9 ms