Protein–RNA interactions for Protein: P51788

CLCN2, Chloride channel protein 2, humanhuman

Predictions only

Length 898 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN2P51788 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
CLCN2P51788 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
CLCN2P51788 ZNF444-211ENST00000592949 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC21.68■■□□□ 1.06
CLCN2P51788 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
CLCN2P51788 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
CLCN2P51788 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC21.68■■□□□ 1.06
CLCN2P51788 GADD45A-202ENST00000370986 1496 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
CLCN2P51788 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC21.68■■□□□ 1.06
CLCN2P51788 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
CLCN2P51788 NRG2-201ENST00000289409 2535 ntAPPRIS ALT2 TSL 5 BASIC21.67■■□□□ 1.06
CLCN2P51788 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
CLCN2P51788 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC21.67■■□□□ 1.06
CLCN2P51788 SUGCT-201ENST00000335693 1645 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
CLCN2P51788 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
CLCN2P51788 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
CLCN2P51788 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
CLCN2P51788 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC21.67■■□□□ 1.06
CLCN2P51788 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC21.67■■□□□ 1.06
CLCN2P51788 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC21.67■■□□□ 1.06
CLCN2P51788 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
CLCN2P51788 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
CLCN2P51788 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
CLCN2P51788 FUT11-201ENST00000372841 2056 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
CLCN2P51788 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
CLCN2P51788 MROH6-202ENST00000524906 1794 ntAPPRIS ALT2 TSL 3 BASIC21.66■■□□□ 1.06
CLCN2P51788 MAGI2-208ENST00000522391 4878 ntAPPRIS ALT2 TSL 5 BASIC21.66■■□□□ 1.06
CLCN2P51788 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
CLCN2P51788 DLK2-202ENST00000372485 1572 ntAPPRIS ALT1 TSL 5 BASIC21.66■■□□□ 1.06
CLCN2P51788 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
CLCN2P51788 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC21.66■■□□□ 1.06
CLCN2P51788 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
CLCN2P51788 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
CLCN2P51788 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
CLCN2P51788 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC21.65■■□□□ 1.06
CLCN2P51788 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC21.65■■□□□ 1.06
CLCN2P51788 CREM-229ENST00000474362 1030 ntTSL 2 BASIC21.65■■□□□ 1.06
CLCN2P51788 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC21.65■■□□□ 1.06
CLCN2P51788 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
CLCN2P51788 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
CLCN2P51788 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
CLCN2P51788 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
CLCN2P51788 ATMIN-201ENST00000299575 4884 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
CLCN2P51788 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC21.64■■□□□ 1.06
CLCN2P51788 ADPRHL2-201ENST00000373178 1668 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
CLCN2P51788 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC21.64■■□□□ 1.05
CLCN2P51788 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC21.64■■□□□ 1.05
CLCN2P51788 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC21.64■■□□□ 1.05
CLCN2P51788 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC21.64■■□□□ 1.05
CLCN2P51788 AF131216.4-201ENST00000638924 1588 ntBASIC21.64■■□□□ 1.05
CLCN2P51788 C11orf95-202ENST00000433688 5716 ntAPPRIS P1 TSL 5 BASIC21.63■■□□□ 1.05
CLCN2P51788 SLIT1-203ENST00000371041 1695 ntTSL 2 BASIC21.63■■□□□ 1.05
CLCN2P51788 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC21.63■■□□□ 1.05
CLCN2P51788 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC21.63■■□□□ 1.05
CLCN2P51788 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC21.63■■□□□ 1.05
CLCN2P51788 BCL2L12-212ENST00000616144 1854 ntAPPRIS P3 TSL 1 (best) BASIC21.63■■□□□ 1.05
CLCN2P51788 KISS1-201ENST00000367194 709 ntAPPRIS P2 TSL 1 (best) BASIC21.63■■□□□ 1.05
CLCN2P51788 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC21.63■■□□□ 1.05
CLCN2P51788 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
CLCN2P51788 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC21.63■■□□□ 1.05
CLCN2P51788 ZNF205-201ENST00000219091 1947 ntAPPRIS P1 TSL 5 BASIC21.63■■□□□ 1.05
CLCN2P51788 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
CLCN2P51788 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC21.62■■□□□ 1.05
CLCN2P51788 DHRS11-215ENST00000618403 1598 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
CLCN2P51788 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
CLCN2P51788 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
CLCN2P51788 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
CLCN2P51788 TK2-202ENST00000417693 1046 ntTSL 2 BASIC21.62■■□□□ 1.05
CLCN2P51788 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC21.62■■□□□ 1.05
CLCN2P51788 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC21.62■■□□□ 1.05
CLCN2P51788 AC092028.1-203ENST00000608262 953 ntBASIC21.62■■□□□ 1.05
CLCN2P51788 HHEX-201ENST00000282728 1727 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
CLCN2P51788 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
CLCN2P51788 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC21.62■■□□□ 1.05
CLCN2P51788 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
CLCN2P51788 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
CLCN2P51788 CKB-201ENST00000348956 1709 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
CLCN2P51788 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC21.61■■□□□ 1.05
CLCN2P51788 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC21.61■■□□□ 1.05
CLCN2P51788 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC21.61■■□□□ 1.05
CLCN2P51788 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC21.61■■□□□ 1.05
CLCN2P51788 GUSBP5-202ENST00000510805 1989 ntBASIC21.61■■□□□ 1.05
CLCN2P51788 WFDC1-201ENST00000219454 1534 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
CLCN2P51788 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
CLCN2P51788 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC21.6■■□□□ 1.05
CLCN2P51788 MATK-204ENST00000585778 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC21.6■■□□□ 1.05
CLCN2P51788 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC21.6■■□□□ 1.05
CLCN2P51788 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC21.6■■□□□ 1.05
CLCN2P51788 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC21.6■■□□□ 1.05
CLCN2P51788 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC21.6■■□□□ 1.05
CLCN2P51788 WWC2-AS2-201ENST00000578387 2183 ntBASIC21.6■■□□□ 1.05
CLCN2P51788 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC21.59■■□□□ 1.05
CLCN2P51788 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC21.59■■□□□ 1.05
CLCN2P51788 LRIG1-202ENST00000383703 5283 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
CLCN2P51788 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC21.59■■□□□ 1.05
CLCN2P51788 B3GNT4-201ENST00000324189 1642 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
CLCN2P51788 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
CLCN2P51788 FAM83F-202ENST00000473717 1917 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
CLCN2P51788 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC21.59■■□□□ 1.05
CLCN2P51788 TSPY9P-201ENST00000440215 945 ntBASIC21.59■■□□□ 1.05
CLCN2P51788 TSPY11P-201ENST00000442607 1045 ntBASIC21.59■■□□□ 1.05
Retrieved 100 of 98,524 protein–RNA pairs in 24 ms