Protein–RNA interactions for Protein: P49458

SRP9, Signal recognition particle 9 kDa protein, humanhuman

Known RBP Predictions only

Length 86 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRP9P49458 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC19.84■□□□□ 0.77
SRP9P49458 FUT11-201ENST00000372841 2056 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
SRP9P49458 PRELID1-201ENST00000303204 1261 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
SRP9P49458 MMP25-AS1-209ENST00000576250 779 ntTSL 5 BASIC19.84■□□□□ 0.77
SRP9P49458 GAK-223ENST00000628912 497 ntTSL 5 BASIC19.84■□□□□ 0.77
SRP9P49458 AL590094.1-201ENST00000635581 706 ntTSL 2 BASIC19.84■□□□□ 0.77
SRP9P49458 MRPL4-207ENST00000590669 1423 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
SRP9P49458 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC19.84■□□□□ 0.77
SRP9P49458 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
SRP9P49458 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC19.83■□□□□ 0.77
SRP9P49458 HHEX-201ENST00000282728 1727 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
SRP9P49458 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC19.83■□□□□ 0.77
SRP9P49458 TK2-216ENST00000564917 1156 ntTSL 3 BASIC19.83■□□□□ 0.77
SRP9P49458 AL121906.1-201ENST00000606866 440 ntTSL 3 BASIC19.83■□□□□ 0.77
SRP9P49458 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC19.83■□□□□ 0.77
SRP9P49458 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC19.83■□□□□ 0.76
SRP9P49458 NR6A1-201ENST00000344523 1846 ntAPPRIS ALT2 TSL 5 BASIC19.83■□□□□ 0.76
SRP9P49458 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
SRP9P49458 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
SRP9P49458 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
SRP9P49458 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
SRP9P49458 GADD45A-202ENST00000370986 1496 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
SRP9P49458 TPI1-210ENST00000613953 1460 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
SRP9P49458 RFLNA-202ENST00000338359 652 ntAPPRIS P2 TSL 1 (best) BASIC19.82■□□□□ 0.76
SRP9P49458 EPM2A-202ENST00000435470 1278 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
SRP9P49458 KISS1R-201ENST00000234371 1625 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
SRP9P49458 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
SRP9P49458 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
SRP9P49458 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
SRP9P49458 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
SRP9P49458 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
SRP9P49458 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
SRP9P49458 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
SRP9P49458 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
SRP9P49458 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
SRP9P49458 PKIB-205ENST00000368452 1398 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
SRP9P49458 LINC01970-201ENST00000581489 1810 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
SRP9P49458 GUSBP5-202ENST00000510805 1989 ntBASIC19.81■□□□□ 0.76
SRP9P49458 NKAIN3-202ENST00000523211 1988 ntAPPRIS P1 TSL 2 BASIC19.81■□□□□ 0.76
SRP9P49458 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
SRP9P49458 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
SRP9P49458 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC19.8■□□□□ 0.76
SRP9P49458 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
SRP9P49458 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
SRP9P49458 CRACR2B-202ENST00000525077 1578 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
SRP9P49458 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC19.8■□□□□ 0.76
SRP9P49458 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC19.8■□□□□ 0.76
SRP9P49458 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
SRP9P49458 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
SRP9P49458 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC19.79■□□□□ 0.76
SRP9P49458 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
SRP9P49458 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC19.79■□□□□ 0.76
SRP9P49458 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
SRP9P49458 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC19.79■□□□□ 0.76
SRP9P49458 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
SRP9P49458 SERP2-201ENST00000379179 784 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
SRP9P49458 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC19.79■□□□□ 0.76
SRP9P49458 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC19.79■□□□□ 0.76
SRP9P49458 MROH6-202ENST00000524906 1794 ntAPPRIS ALT2 TSL 3 BASIC19.79■□□□□ 0.76
SRP9P49458 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC19.79■□□□□ 0.76
SRP9P49458 LSR-203ENST00000360798 1963 ntTSL 2 BASIC19.79■□□□□ 0.76
SRP9P49458 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC19.78■□□□□ 0.76
SRP9P49458 AC137767.1-201ENST00000602918 1920 ntBASIC19.78■□□□□ 0.76
SRP9P49458 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
SRP9P49458 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
SRP9P49458 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC19.78■□□□□ 0.76
SRP9P49458 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
SRP9P49458 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
SRP9P49458 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
SRP9P49458 MIR4281-201ENST00000580852 62 ntBASIC19.78■□□□□ 0.76
SRP9P49458 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC19.78■□□□□ 0.76
SRP9P49458 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC19.78■□□□□ 0.76
SRP9P49458 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
SRP9P49458 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC19.78■□□□□ 0.76
SRP9P49458 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC19.78■□□□□ 0.76
SRP9P49458 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.76
SRP9P49458 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
SRP9P49458 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
SRP9P49458 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
SRP9P49458 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
SRP9P49458 TMEM170A-202ENST00000561878 1072 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
SRP9P49458 AC009163.4-201ENST00000567194 530 ntAPPRIS P1 TSL 2 BASIC19.77■□□□□ 0.76
SRP9P49458 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC19.77■□□□□ 0.76
SRP9P49458 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
SRP9P49458 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC19.77■□□□□ 0.76
SRP9P49458 MATK-204ENST00000585778 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.75
SRP9P49458 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC19.77■□□□□ 0.75
SRP9P49458 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
SRP9P49458 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC19.76■□□□□ 0.75
SRP9P49458 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
SRP9P49458 KLC3-201ENST00000391946 1780 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
SRP9P49458 BOD1-202ENST00000311086 1562 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
SRP9P49458 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
SRP9P49458 OSCAR-206ENST00000391760 629 ntTSL 2 BASIC19.76■□□□□ 0.75
SRP9P49458 PRTG-204ENST00000561292 833 ntTSL 3 BASIC19.76■□□□□ 0.75
SRP9P49458 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC19.76■□□□□ 0.75
SRP9P49458 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC19.76■□□□□ 0.75
SRP9P49458 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC19.76■□□□□ 0.75
SRP9P49458 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC19.75■□□□□ 0.75
SRP9P49458 AC127496.7-201ENST00000625110 1798 ntBASIC19.75■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 24.1 ms