Protein–RNA interactions for Protein: P23258

TUBG1, Tubulin gamma-1 chain, humanhuman

Predictions only

Length 451 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TUBG1P23258 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC19.45■□□□□ 0.7
TUBG1P23258 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
TUBG1P23258 BIN1-205ENST00000351659 2365 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
TUBG1P23258 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
TUBG1P23258 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC19.44■□□□□ 0.7
TUBG1P23258 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
TUBG1P23258 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
TUBG1P23258 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
TUBG1P23258 GPX4-213ENST00000622390 1002 ntTSL 5 BASIC19.44■□□□□ 0.7
TUBG1P23258 LSR-201ENST00000347609 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
TUBG1P23258 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
TUBG1P23258 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
TUBG1P23258 LSR-213ENST00000605618 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
TUBG1P23258 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
TUBG1P23258 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
TUBG1P23258 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
TUBG1P23258 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC19.43■□□□□ 0.7
TUBG1P23258 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
TUBG1P23258 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC19.43■□□□□ 0.7
TUBG1P23258 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC19.43■□□□□ 0.7
TUBG1P23258 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC19.43■□□□□ 0.7
TUBG1P23258 AK3-203ENST00000447596 705 ntTSL 2 BASIC19.43■□□□□ 0.7
TUBG1P23258 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC19.43■□□□□ 0.7
TUBG1P23258 ERGIC1-202ENST00000393784 2881 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
TUBG1P23258 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
TUBG1P23258 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
TUBG1P23258 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
TUBG1P23258 USF2-207ENST00000595068 1612 ntTSL 5 BASIC19.43■□□□□ 0.7
TUBG1P23258 ABCB10P4-201ENST00000566803 2184 ntBASIC19.43■□□□□ 0.7
TUBG1P23258 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC19.42■□□□□ 0.7
TUBG1P23258 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC19.42■□□□□ 0.7
TUBG1P23258 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC19.42■□□□□ 0.7
TUBG1P23258 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC19.42■□□□□ 0.7
TUBG1P23258 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC19.42■□□□□ 0.7
TUBG1P23258 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
TUBG1P23258 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
TUBG1P23258 SRXN1-201ENST00000381962 2698 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
TUBG1P23258 NECTIN2-202ENST00000252485 2112 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
TUBG1P23258 RAB40B-201ENST00000269347 2189 ntTSL 2 BASIC19.42■□□□□ 0.7
TUBG1P23258 AGAP3-201ENST00000335367 2675 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
TUBG1P23258 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
TUBG1P23258 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
TUBG1P23258 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
TUBG1P23258 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
TUBG1P23258 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
TUBG1P23258 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
TUBG1P23258 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC19.41■□□□□ 0.7
TUBG1P23258 AL117332.1-201ENST00000622628 974 ntBASIC19.41■□□□□ 0.7
TUBG1P23258 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
TUBG1P23258 FP325331.1-202ENST00000623531 1380 ntBASIC19.41■□□□□ 0.7
TUBG1P23258 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
TUBG1P23258 NAGLU-201ENST00000225927 2544 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
TUBG1P23258 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
TUBG1P23258 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC19.4■□□□□ 0.7
TUBG1P23258 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
TUBG1P23258 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
TUBG1P23258 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC19.4■□□□□ 0.7
TUBG1P23258 ADAM22-209ENST00000439864 2576 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
TUBG1P23258 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
TUBG1P23258 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC19.4■□□□□ 0.7
TUBG1P23258 CCZ1B-201ENST00000316731 2885 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
TUBG1P23258 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC19.39■□□□□ 0.7
TUBG1P23258 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
TUBG1P23258 CPLX1-201ENST00000304062 2181 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
TUBG1P23258 BSPRY-201ENST00000374183 2339 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
TUBG1P23258 ATAD3B-201ENST00000308647 2448 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
TUBG1P23258 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
TUBG1P23258 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC19.39■□□□□ 0.69
TUBG1P23258 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
TUBG1P23258 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC19.39■□□□□ 0.69
TUBG1P23258 AGTR1-203ENST00000404754 2252 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
TUBG1P23258 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
TUBG1P23258 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
TUBG1P23258 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC19.38■□□□□ 0.69
TUBG1P23258 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC19.38■□□□□ 0.69
TUBG1P23258 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
TUBG1P23258 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
TUBG1P23258 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC19.38■□□□□ 0.69
TUBG1P23258 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC19.38■□□□□ 0.69
TUBG1P23258 C5orf58-204ENST00000521850 2113 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
TUBG1P23258 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC19.38■□□□□ 0.69
TUBG1P23258 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC19.38■□□□□ 0.69
TUBG1P23258 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
TUBG1P23258 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC19.38■□□□□ 0.69
TUBG1P23258 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC19.38■□□□□ 0.69
TUBG1P23258 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
TUBG1P23258 TMEM256-PLSCR3-204ENST00000573331 2557 ntAPPRIS P5 TSL 2 BASIC19.38■□□□□ 0.69
TUBG1P23258 ID4-201ENST00000378700 2344 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
TUBG1P23258 NKX2-3-201ENST00000344586 2097 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
TUBG1P23258 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
TUBG1P23258 ACAA1-219ENST00000625927 1760 ntTSL 5 BASIC19.37■□□□□ 0.69
TUBG1P23258 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
TUBG1P23258 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC19.37■□□□□ 0.69
TUBG1P23258 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC19.37■□□□□ 0.69
TUBG1P23258 THRA-202ENST00000394121 2260 ntTSL 2 BASIC19.37■□□□□ 0.69
TUBG1P23258 PTH1R-201ENST00000313049 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
TUBG1P23258 PKD1P6-201ENST00000343738 4769 ntBASIC19.37■□□□□ 0.69
TUBG1P23258 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC19.37■□□□□ 0.69
TUBG1P23258 SDSL-202ENST00000403593 1449 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
TUBG1P23258 ENTPD4-201ENST00000356206 2097 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 141.7 ms