Protein–RNA interactions for Protein: P22223

CDH3, Cadherin-3, humanhuman

Predictions only

Length 829 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3P22223 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC21.9■■□□□ 1.1
CDH3P22223 ZNF205-202ENST00000382192 2062 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
CDH3P22223 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
CDH3P22223 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
CDH3P22223 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
CDH3P22223 ACTR1B-201ENST00000289228 2243 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
CDH3P22223 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
CDH3P22223 UNC50-204ENST00000409975 2172 ntTSL 1 (best) BASIC21.89■■□□□ 1.1
CDH3P22223 SAMD4B-208ENST00000598913 2877 ntAPPRIS ALT1 TSL 1 (best) BASIC21.89■■□□□ 1.1
CDH3P22223 DAZAP1-205ENST00000587079 2086 ntAPPRIS ALT1 TSL 5 BASIC21.89■■□□□ 1.1
CDH3P22223 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC21.89■■□□□ 1.09
CDH3P22223 RALB-208ENST00000631312 311 ntTSL 5 BASIC21.89■■□□□ 1.09
CDH3P22223 APBA3-201ENST00000316757 2075 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
CDH3P22223 MYBL2-201ENST00000217026 2639 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
CDH3P22223 SUGCT-201ENST00000335693 1645 ntAPPRIS ALT2 TSL 1 (best) BASIC21.88■■□□□ 1.09
CDH3P22223 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC21.88■■□□□ 1.09
CDH3P22223 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC21.88■■□□□ 1.09
CDH3P22223 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC21.88■■□□□ 1.09
CDH3P22223 HSD11B1L-206ENST00000423665 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC21.88■■□□□ 1.09
CDH3P22223 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC21.88■■□□□ 1.09
CDH3P22223 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC21.88■■□□□ 1.09
CDH3P22223 FAM83F-202ENST00000473717 1917 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
CDH3P22223 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
CDH3P22223 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC21.88■■□□□ 1.09
CDH3P22223 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC21.87■■□□□ 1.09
CDH3P22223 RPIA-201ENST00000283646 1848 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
CDH3P22223 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC21.87■■□□□ 1.09
CDH3P22223 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC21.87■■□□□ 1.09
CDH3P22223 AC096631.2-201ENST00000436136 790 ntBASIC21.87■■□□□ 1.09
CDH3P22223 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
CDH3P22223 TSEN34-201ENST00000302937 2294 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
CDH3P22223 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
CDH3P22223 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
CDH3P22223 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC21.87■■□□□ 1.09
CDH3P22223 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC21.86■■□□□ 1.09
CDH3P22223 GATM-206ENST00000558336 1522 ntTSL 2 BASIC21.86■■□□□ 1.09
CDH3P22223 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
CDH3P22223 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
CDH3P22223 KRTAP5-4-201ENST00000399682 1181 ntAPPRIS P5 BASIC21.86■■□□□ 1.09
CDH3P22223 AL139246.5-201ENST00000606645 996 ntBASIC21.86■■□□□ 1.09
CDH3P22223 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC21.86■■□□□ 1.09
CDH3P22223 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
CDH3P22223 GNPTG-201ENST00000204679 1983 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
CDH3P22223 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC21.86■■□□□ 1.09
CDH3P22223 MSX2-201ENST00000239243 2241 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
CDH3P22223 PYCR1-202ENST00000337943 1890 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
CDH3P22223 CCDC151-202ENST00000586836 1867 ntTSL 2 BASIC21.86■■□□□ 1.09
CDH3P22223 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC21.85■■□□□ 1.09
CDH3P22223 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
CDH3P22223 CASK-201ENST00000378154 2494 ntTSL 5 BASIC21.85■■□□□ 1.09
CDH3P22223 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC21.85■■□□□ 1.09
CDH3P22223 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
CDH3P22223 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
CDH3P22223 DCTPP1-201ENST00000319285 1222 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
CDH3P22223 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
CDH3P22223 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
CDH3P22223 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
CDH3P22223 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
CDH3P22223 EI24-204ENST00000527235 1625 ntTSL 5 BASIC21.84■■□□□ 1.09
CDH3P22223 USF2-207ENST00000595068 1612 ntTSL 5 BASIC21.84■■□□□ 1.09
CDH3P22223 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
CDH3P22223 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
CDH3P22223 KDELR3-202ENST00000409006 931 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
CDH3P22223 RPRD1A-207ENST00000588737 1264 ntTSL 2 BASIC21.84■■□□□ 1.09
CDH3P22223 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC21.84■■□□□ 1.09
CDH3P22223 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC21.83■■□□□ 1.09
CDH3P22223 PREB-202ENST00000406567 1910 ntTSL 5 BASIC21.83■■□□□ 1.09
CDH3P22223 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
CDH3P22223 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC21.83■■□□□ 1.09
CDH3P22223 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
CDH3P22223 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC21.83■■□□□ 1.09
CDH3P22223 B3GNT4-201ENST00000324189 1642 ntTSL 1 (best) BASIC21.83■■□□□ 1.08
CDH3P22223 VPS53-211ENST00000571805 2356 ntTSL 1 (best) BASIC21.83■■□□□ 1.08
CDH3P22223 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC21.83■■□□□ 1.08
CDH3P22223 AC009102.2-201ENST00000606772 1639 ntBASIC21.83■■□□□ 1.08
CDH3P22223 ZNF76-203ENST00000373953 2716 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
CDH3P22223 ADORA2B-201ENST00000304222 1735 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
CDH3P22223 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
CDH3P22223 EEF1D-201ENST00000317198 1458 ntAPPRIS ALT2 TSL 5 BASIC21.83■■□□□ 1.08
CDH3P22223 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
CDH3P22223 ADPRHL2-201ENST00000373178 1668 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
CDH3P22223 LINC01124-201ENST00000409786 2117 ntBASIC21.82■■□□□ 1.08
CDH3P22223 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
CDH3P22223 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
CDH3P22223 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
CDH3P22223 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC21.82■■□□□ 1.08
CDH3P22223 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC21.82■■□□□ 1.08
CDH3P22223 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
CDH3P22223 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
CDH3P22223 AC110285.6-201ENST00000617652 491 ntBASIC21.82■■□□□ 1.08
CDH3P22223 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC21.82■■□□□ 1.08
CDH3P22223 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
CDH3P22223 TMED2-201ENST00000262225 2560 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
CDH3P22223 TXNRD2-201ENST00000334363 1893 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
CDH3P22223 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
CDH3P22223 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC21.81■■□□□ 1.08
CDH3P22223 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
CDH3P22223 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
CDH3P22223 R3HDM4-203ENST00000587975 1765 ntTSL 3 BASIC21.81■■□□□ 1.08
CDH3P22223 TBL2-222ENST00000610724 2165 ntTSL 5 BASIC21.81■■□□□ 1.08
Retrieved 100 of 98,524 protein–RNA pairs in 32 ms