Protein–RNA interactions for Protein: P0DKX0

ZNF728, Zinc finger protein 728, humanhuman

Predictions only

Length 622 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF728P0DKX0 AC011448.1-201ENST00000555938 1100 ntAPPRIS P1 TSL 2 BASIC19.05■□□□□ 0.64
ZNF728P0DKX0 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC19.05■□□□□ 0.64
ZNF728P0DKX0 TMEM170A-202ENST00000561878 1072 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
ZNF728P0DKX0 AC009163.4-201ENST00000567194 530 ntAPPRIS P1 TSL 2 BASIC19.05■□□□□ 0.64
ZNF728P0DKX0 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC19.05■□□□□ 0.64
ZNF728P0DKX0 AC137630.3-201ENST00000607245 391 ntBASIC19.05■□□□□ 0.64
ZNF728P0DKX0 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
ZNF728P0DKX0 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
ZNF728P0DKX0 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
ZNF728P0DKX0 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC19.04■□□□□ 0.64
ZNF728P0DKX0 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
ZNF728P0DKX0 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
ZNF728P0DKX0 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
ZNF728P0DKX0 ST20-MTHFS-201ENST00000479961 859 ntAPPRIS P1 TSL 3 BASIC19.04■□□□□ 0.64
ZNF728P0DKX0 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC19.04■□□□□ 0.64
ZNF728P0DKX0 AF131216.4-201ENST00000638924 1588 ntBASIC19.04■□□□□ 0.64
ZNF728P0DKX0 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
ZNF728P0DKX0 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
ZNF728P0DKX0 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
ZNF728P0DKX0 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC19.03■□□□□ 0.64
ZNF728P0DKX0 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
ZNF728P0DKX0 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
ZNF728P0DKX0 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC19.03■□□□□ 0.64
ZNF728P0DKX0 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
ZNF728P0DKX0 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
ZNF728P0DKX0 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC19.03■□□□□ 0.64
ZNF728P0DKX0 BX664725.1-201ENST00000438252 379 ntBASIC19.03■□□□□ 0.64
ZNF728P0DKX0 RNF146-205ENST00000477776 762 ntTSL 3 BASIC19.03■□□□□ 0.64
ZNF728P0DKX0 RAET1E-AS1-203ENST00000606915 1210 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
ZNF728P0DKX0 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC19.03■□□□□ 0.64
ZNF728P0DKX0 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC19.03■□□□□ 0.64
ZNF728P0DKX0 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC19.03■□□□□ 0.64
ZNF728P0DKX0 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
ZNF728P0DKX0 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
ZNF728P0DKX0 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
ZNF728P0DKX0 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC19.03■□□□□ 0.64
ZNF728P0DKX0 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC19.03■□□□□ 0.64
ZNF728P0DKX0 ZNF688-203ENST00000563276 1492 ntTSL 2 BASIC19.03■□□□□ 0.64
ZNF728P0DKX0 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
ZNF728P0DKX0 AC092068.2-201ENST00000590491 1708 ntBASIC19.03■□□□□ 0.64
ZNF728P0DKX0 AL160276.1-201ENST00000636672 1312 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.64
ZNF728P0DKX0 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC19.02■□□□□ 0.64
ZNF728P0DKX0 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC19.02■□□□□ 0.64
ZNF728P0DKX0 DUSP8P3-201ENST00000399571 1760 ntBASIC19.02■□□□□ 0.64
ZNF728P0DKX0 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC19.02■□□□□ 0.64
ZNF728P0DKX0 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
ZNF728P0DKX0 LBH-205ENST00000407930 756 ntTSL 2 BASIC19.02■□□□□ 0.64
ZNF728P0DKX0 AL451085.2-201ENST00000605085 799 ntBASIC19.02■□□□□ 0.64
ZNF728P0DKX0 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC19.02■□□□□ 0.64
ZNF728P0DKX0 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC19.02■□□□□ 0.64
ZNF728P0DKX0 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.64
ZNF728P0DKX0 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC19.02■□□□□ 0.64
ZNF728P0DKX0 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC19.02■□□□□ 0.63
ZNF728P0DKX0 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
ZNF728P0DKX0 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
ZNF728P0DKX0 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
ZNF728P0DKX0 DHRS11-215ENST00000618403 1598 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
ZNF728P0DKX0 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
ZNF728P0DKX0 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC19.02■□□□□ 0.63
ZNF728P0DKX0 SOHLH1-202ENST00000425225 1411 ntAPPRIS ALT2 TSL 5 BASIC19.01■□□□□ 0.63
ZNF728P0DKX0 MAPK9-202ENST00000347470 1509 ntTSL 5 BASIC19.01■□□□□ 0.63
ZNF728P0DKX0 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
ZNF728P0DKX0 AL022069.1-201ENST00000568025 1636 ntBASIC19.01■□□□□ 0.63
ZNF728P0DKX0 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC19.01■□□□□ 0.63
ZNF728P0DKX0 CTAG1B-201ENST00000328435 748 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
ZNF728P0DKX0 PRR7-204ENST00000510492 1285 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
ZNF728P0DKX0 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
ZNF728P0DKX0 LINC01925-201ENST00000579492 500 ntTSL 5 BASIC19.01■□□□□ 0.63
ZNF728P0DKX0 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
ZNF728P0DKX0 CTAG1A-202ENST00000599837 748 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
ZNF728P0DKX0 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC19.01■□□□□ 0.63
ZNF728P0DKX0 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
ZNF728P0DKX0 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC19.01■□□□□ 0.63
ZNF728P0DKX0 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
ZNF728P0DKX0 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC19.01■□□□□ 0.63
ZNF728P0DKX0 RILP-201ENST00000301336 1771 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
ZNF728P0DKX0 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC19.01■□□□□ 0.63
ZNF728P0DKX0 AL161729.1-201ENST00000604104 1402 ntBASIC19■□□□□ 0.63
ZNF728P0DKX0 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC19■□□□□ 0.63
ZNF728P0DKX0 KMT2E-AS1-201ENST00000453677 736 ntTSL 3 BASIC19■□□□□ 0.63
ZNF728P0DKX0 STK32C-205ENST00000456004 607 ntTSL 2 BASIC19■□□□□ 0.63
ZNF728P0DKX0 AC009299.2-201ENST00000482477 511 ntBASIC19■□□□□ 0.63
ZNF728P0DKX0 LAT-217ENST00000630764 610 ntAPPRIS ALT2 TSL 5 BASIC19■□□□□ 0.63
ZNF728P0DKX0 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC19■□□□□ 0.63
ZNF728P0DKX0 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
ZNF728P0DKX0 EP400NL-214ENST00000641289 2402 ntBASIC19■□□□□ 0.63
ZNF728P0DKX0 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC18.99■□□□□ 0.63
ZNF728P0DKX0 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
ZNF728P0DKX0 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
ZNF728P0DKX0 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
ZNF728P0DKX0 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
ZNF728P0DKX0 LRP11-202ENST00000367368 1042 ntTSL 2 BASIC18.99■□□□□ 0.63
ZNF728P0DKX0 Z92544.1-202ENST00000571933 1220 ntBASIC18.99■□□□□ 0.63
ZNF728P0DKX0 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
ZNF728P0DKX0 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
ZNF728P0DKX0 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC18.99■□□□□ 0.63
ZNF728P0DKX0 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
ZNF728P0DKX0 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
ZNF728P0DKX0 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
ZNF728P0DKX0 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 20.5 ms