Protein–RNA interactions for Protein: P0C7T8

TMEM253, Transmembrane protein 253, humanhuman

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM253P0C7T8 USF2-207ENST00000595068 1612 ntTSL 5 BASIC23.84■■□□□ 1.41
TMEM253P0C7T8 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
TMEM253P0C7T8 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC23.84■■□□□ 1.41
TMEM253P0C7T8 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
TMEM253P0C7T8 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC23.84■■□□□ 1.41
TMEM253P0C7T8 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC23.84■■□□□ 1.41
TMEM253P0C7T8 PRRX2-201ENST00000372469 1311 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
TMEM253P0C7T8 KLHDC9-203ENST00000392192 1333 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
TMEM253P0C7T8 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
TMEM253P0C7T8 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC23.83■■□□□ 1.41
TMEM253P0C7T8 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC23.83■■□□□ 1.41
TMEM253P0C7T8 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
TMEM253P0C7T8 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC23.83■■□□□ 1.41
TMEM253P0C7T8 PKNOX2-AS1-201ENST00000532316 586 ntTSL 3 BASIC23.83■■□□□ 1.41
TMEM253P0C7T8 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC23.83■■□□□ 1.41
TMEM253P0C7T8 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC23.83■■□□□ 1.41
TMEM253P0C7T8 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.4
TMEM253P0C7T8 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC23.83■■□□□ 1.4
TMEM253P0C7T8 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC23.82■■□□□ 1.4
TMEM253P0C7T8 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC23.82■■□□□ 1.4
TMEM253P0C7T8 CD63-201ENST00000257857 1070 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
TMEM253P0C7T8 PROSER2-202ENST00000379200 1232 ntAPPRIS ALT2 BASIC23.82■■□□□ 1.4
TMEM253P0C7T8 AL033527.3-201ENST00000566366 1196 ntBASIC23.82■■□□□ 1.4
TMEM253P0C7T8 DSG2-202ENST00000585206 1081 ntTSL 2 BASIC23.82■■□□□ 1.4
TMEM253P0C7T8 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC23.82■■□□□ 1.4
TMEM253P0C7T8 COMT-203ENST00000403184 2217 ntTSL 2 BASIC23.82■■□□□ 1.4
TMEM253P0C7T8 GUSBP5-202ENST00000510805 1989 ntBASIC23.82■■□□□ 1.4
TMEM253P0C7T8 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
TMEM253P0C7T8 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC23.81■■□□□ 1.4
TMEM253P0C7T8 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC23.81■■□□□ 1.4
TMEM253P0C7T8 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC23.81■■□□□ 1.4
TMEM253P0C7T8 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC23.81■■□□□ 1.4
TMEM253P0C7T8 TERT-206ENST00000508104 2486 ntTSL 5 BASIC23.81■■□□□ 1.4
TMEM253P0C7T8 EP400NL-214ENST00000641289 2402 ntBASIC23.8■■□□□ 1.4
TMEM253P0C7T8 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC23.8■■□□□ 1.4
TMEM253P0C7T8 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC23.8■■□□□ 1.4
TMEM253P0C7T8 FAM120C-203ENST00000477084 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC23.8■■□□□ 1.4
TMEM253P0C7T8 SNX5-217ENST00000606557 1087 ntBASIC23.8■■□□□ 1.4
TMEM253P0C7T8 AC064853.4-201ENST00000641394 363 ntAPPRIS P1 BASIC23.8■■□□□ 1.4
TMEM253P0C7T8 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC23.8■■□□□ 1.4
TMEM253P0C7T8 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC23.8■■□□□ 1.4
TMEM253P0C7T8 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
TMEM253P0C7T8 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
TMEM253P0C7T8 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
TMEM253P0C7T8 IGFBP6-201ENST00000301464 1169 ntAPPRIS P2 TSL 1 (best) BASIC23.79■■□□□ 1.4
TMEM253P0C7T8 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC23.79■■□□□ 1.4
TMEM253P0C7T8 AC103724.3-201ENST00000564481 992 ntBASIC23.79■■□□□ 1.4
TMEM253P0C7T8 SEC11C-204ENST00000587834 1202 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
TMEM253P0C7T8 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
TMEM253P0C7T8 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC23.79■■□□□ 1.4
TMEM253P0C7T8 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC23.79■■□□□ 1.4
TMEM253P0C7T8 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC23.79■■□□□ 1.4
TMEM253P0C7T8 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC23.79■■□□□ 1.4
TMEM253P0C7T8 AL353803.4-201ENST00000565882 1934 ntBASIC23.78■■□□□ 1.4
TMEM253P0C7T8 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
TMEM253P0C7T8 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
TMEM253P0C7T8 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC23.78■■□□□ 1.4
TMEM253P0C7T8 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
TMEM253P0C7T8 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
TMEM253P0C7T8 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC23.78■■□□□ 1.4
TMEM253P0C7T8 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
TMEM253P0C7T8 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC23.77■■□□□ 1.4
TMEM253P0C7T8 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
TMEM253P0C7T8 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
TMEM253P0C7T8 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC23.77■■□□□ 1.4
TMEM253P0C7T8 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
TMEM253P0C7T8 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC23.76■■□□□ 1.39
TMEM253P0C7T8 ECEL1P1-201ENST00000373592 1742 ntBASIC23.76■■□□□ 1.39
TMEM253P0C7T8 ESRRAP2-201ENST00000418437 1549 ntBASIC23.76■■□□□ 1.39
TMEM253P0C7T8 TK2-202ENST00000417693 1046 ntTSL 2 BASIC23.76■■□□□ 1.39
TMEM253P0C7T8 LINC01770-201ENST00000417917 634 ntTSL 2 BASIC23.76■■□□□ 1.39
TMEM253P0C7T8 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
TMEM253P0C7T8 AC093390.2-201ENST00000638628 1007 ntTSL 5 BASIC23.76■■□□□ 1.39
TMEM253P0C7T8 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
TMEM253P0C7T8 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
TMEM253P0C7T8 REST-206ENST00000612429 1376 ntTSL 5 BASIC23.76■■□□□ 1.39
TMEM253P0C7T8 REST-207ENST00000616975 1370 ntTSL 5 BASIC23.76■■□□□ 1.39
TMEM253P0C7T8 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
TMEM253P0C7T8 KRT8P33-201ENST00000508125 1423 ntBASIC23.76■■□□□ 1.39
TMEM253P0C7T8 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC23.75■■□□□ 1.39
TMEM253P0C7T8 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
TMEM253P0C7T8 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
TMEM253P0C7T8 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
TMEM253P0C7T8 YBX1P4-201ENST00000392794 808 ntBASIC23.75■■□□□ 1.39
TMEM253P0C7T8 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC23.75■■□□□ 1.39
TMEM253P0C7T8 KCTD5-202ENST00000564195 774 ntTSL 5 BASIC23.75■■□□□ 1.39
TMEM253P0C7T8 AC137630.3-201ENST00000607245 391 ntBASIC23.75■■□□□ 1.39
TMEM253P0C7T8 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
TMEM253P0C7T8 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC23.75■■□□□ 1.39
TMEM253P0C7T8 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC23.75■■□□□ 1.39
TMEM253P0C7T8 LINC00526-201ENST00000581067 1875 ntBASIC23.75■■□□□ 1.39
TMEM253P0C7T8 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC23.75■■□□□ 1.39
TMEM253P0C7T8 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
TMEM253P0C7T8 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC23.74■■□□□ 1.39
TMEM253P0C7T8 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC23.74■■□□□ 1.39
TMEM253P0C7T8 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC23.74■■□□□ 1.39
TMEM253P0C7T8 RFLNA-202ENST00000338359 652 ntAPPRIS P2 TSL 1 (best) BASIC23.74■■□□□ 1.39
TMEM253P0C7T8 HNRNPUL1-221ENST00000617305 1018 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
TMEM253P0C7T8 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC23.74■■□□□ 1.39
TMEM253P0C7T8 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
Retrieved 100 of 98,524 protein–RNA pairs in 69.8 ms