Protein–RNA interactions for Protein: P07384

CAPN1, Calpain-1 catalytic subunit, humanhuman

Predictions only

Length 714 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1P07384 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC22.06■■□□□ 1.12
CAPN1P07384 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC22.06■■□□□ 1.12
CAPN1P07384 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC22.06■■□□□ 1.12
CAPN1P07384 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
CAPN1P07384 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
CAPN1P07384 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
CAPN1P07384 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
CAPN1P07384 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
CAPN1P07384 C11orf91-201ENST00000379011 811 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
CAPN1P07384 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC22.05■■□□□ 1.12
CAPN1P07384 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC22.05■■□□□ 1.12
CAPN1P07384 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
CAPN1P07384 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
CAPN1P07384 EI24-204ENST00000527235 1625 ntTSL 5 BASIC22.05■■□□□ 1.12
CAPN1P07384 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC22.05■■□□□ 1.12
CAPN1P07384 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC22.05■■□□□ 1.12
CAPN1P07384 ADSS-201ENST00000366535 2780 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
CAPN1P07384 ECE2-202ENST00000357474 2667 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
CAPN1P07384 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
CAPN1P07384 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC22.04■■□□□ 1.12
CAPN1P07384 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC22.04■■□□□ 1.12
CAPN1P07384 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
CAPN1P07384 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC22.04■■□□□ 1.12
CAPN1P07384 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC22.04■■□□□ 1.12
CAPN1P07384 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC22.04■■□□□ 1.12
CAPN1P07384 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC22.04■■□□□ 1.12
CAPN1P07384 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC22.04■■□□□ 1.12
CAPN1P07384 BFSP1-202ENST00000377873 2207 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
CAPN1P07384 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC22.04■■□□□ 1.12
CAPN1P07384 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
CAPN1P07384 ALDH1A3-203ENST00000557963 1670 ntBASIC22.04■■□□□ 1.12
CAPN1P07384 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC22.04■■□□□ 1.12
CAPN1P07384 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC22.04■■□□□ 1.12
CAPN1P07384 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC22.03■■□□□ 1.12
CAPN1P07384 EHBP1L1-201ENST00000309295 5185 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
CAPN1P07384 ST8SIA6-201ENST00000377602 2276 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
CAPN1P07384 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
CAPN1P07384 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC22.03■■□□□ 1.12
CAPN1P07384 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC22.03■■□□□ 1.12
CAPN1P07384 CLTA-210ENST00000540080 989 ntTSL 2 BASIC22.03■■□□□ 1.12
CAPN1P07384 MTDHP2-201ENST00000601468 714 ntBASIC22.03■■□□□ 1.12
CAPN1P07384 MIR6724-1-201ENST00000616420 92 ntBASIC22.03■■□□□ 1.12
CAPN1P07384 MIR6724-2-201ENST00000616483 92 ntBASIC22.03■■□□□ 1.12
CAPN1P07384 MIR6724-4-201ENST00000617390 92 ntBASIC22.03■■□□□ 1.12
CAPN1P07384 MIR6724-3-201ENST00000622482 92 ntBASIC22.03■■□□□ 1.12
CAPN1P07384 AL117332.1-201ENST00000622628 974 ntBASIC22.03■■□□□ 1.12
CAPN1P07384 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC22.03■■□□□ 1.12
CAPN1P07384 RBM4B-203ENST00000525754 2339 ntAPPRIS P1 TSL 2 BASIC22.03■■□□□ 1.12
CAPN1P07384 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC22.03■■□□□ 1.12
CAPN1P07384 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
CAPN1P07384 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC22.03■■□□□ 1.12
CAPN1P07384 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC22.03■■□□□ 1.12
CAPN1P07384 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC22.03■■□□□ 1.12
CAPN1P07384 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
CAPN1P07384 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC22.02■■□□□ 1.12
CAPN1P07384 LBH-205ENST00000407930 756 ntTSL 2 BASIC22.02■■□□□ 1.12
CAPN1P07384 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC22.02■■□□□ 1.12
CAPN1P07384 AC092068.2-201ENST00000590491 1708 ntBASIC22.02■■□□□ 1.12
CAPN1P07384 PSPH-201ENST00000275605 2131 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
CAPN1P07384 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC22.01■■□□□ 1.11
CAPN1P07384 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC22.01■■□□□ 1.11
CAPN1P07384 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
CAPN1P07384 AC131281.2-201ENST00000520478 145 ntBASIC22.01■■□□□ 1.11
CAPN1P07384 MIR3621-201ENST00000580529 85 ntBASIC22.01■■□□□ 1.11
CAPN1P07384 EXOG-217ENST00000630638 197 ntTSL 5 BASIC22.01■■□□□ 1.11
CAPN1P07384 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC22.01■■□□□ 1.11
CAPN1P07384 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC22.01■■□□□ 1.11
CAPN1P07384 PTH1R-202ENST00000418619 2070 ntAPPRIS P1 TSL 5 BASIC22.01■■□□□ 1.11
CAPN1P07384 ACAA1-219ENST00000625927 1760 ntTSL 5 BASIC22.01■■□□□ 1.11
CAPN1P07384 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
CAPN1P07384 PON2-218ENST00000633531 1653 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
CAPN1P07384 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC22■■□□□ 1.11
CAPN1P07384 RPP21-222ENST00000433076 577 ntTSL 2 BASIC22■■□□□ 1.11
CAPN1P07384 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC22■■□□□ 1.11
CAPN1P07384 TRIR-202ENST00000588213 841 ntTSL 3 BASIC22■■□□□ 1.11
CAPN1P07384 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC22■■□□□ 1.11
CAPN1P07384 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC22■■□□□ 1.11
CAPN1P07384 AC019069.1-201ENST00000610008 1333 ntBASIC22■■□□□ 1.11
CAPN1P07384 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC22■■□□□ 1.11
CAPN1P07384 LRRC73-201ENST00000372441 2121 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
CAPN1P07384 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC21.99■■□□□ 1.11
CAPN1P07384 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC21.99■■□□□ 1.11
CAPN1P07384 B3GAT3-201ENST00000265471 1641 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
CAPN1P07384 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC21.99■■□□□ 1.11
CAPN1P07384 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC21.99■■□□□ 1.11
CAPN1P07384 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC21.99■■□□□ 1.11
CAPN1P07384 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
CAPN1P07384 SRR-208ENST00000576848 588 ntTSL 4 BASIC21.99■■□□□ 1.11
CAPN1P07384 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
CAPN1P07384 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
CAPN1P07384 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
CAPN1P07384 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
CAPN1P07384 H19-210ENST00000439725 1929 ntTSL 2 BASIC21.98■■□□□ 1.11
CAPN1P07384 ADORA2B-201ENST00000304222 1735 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
CAPN1P07384 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC21.98■■□□□ 1.11
CAPN1P07384 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC21.98■■□□□ 1.11
CAPN1P07384 NRG2-201ENST00000289409 2535 ntAPPRIS ALT2 TSL 5 BASIC21.98■■□□□ 1.11
CAPN1P07384 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC21.98■■□□□ 1.11
CAPN1P07384 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC21.98■■□□□ 1.11
CAPN1P07384 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC21.98■■□□□ 1.11
Retrieved 100 of 98,524 protein–RNA pairs in 33 ms