Protein–RNA interactions for Protein: P05114

HMGN1, Non-histone chromosomal protein HMG-14, humanhuman

Predictions only

Length 100 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P05114 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC20.33■□□□□ 0.85
HMGN1P05114 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
HMGN1P05114 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
HMGN1P05114 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
HMGN1P05114 CLEC2L-201ENST00000422142 1359 ntAPPRIS P2 TSL 3 BASIC20.33■□□□□ 0.84
HMGN1P05114 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
HMGN1P05114 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
HMGN1P05114 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
HMGN1P05114 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
HMGN1P05114 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC20.32■□□□□ 0.84
HMGN1P05114 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC20.32■□□□□ 0.84
HMGN1P05114 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
HMGN1P05114 SMKR1-201ENST00000462322 1035 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
HMGN1P05114 EME2-205ENST00000568449 1234 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
HMGN1P05114 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
HMGN1P05114 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
HMGN1P05114 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
HMGN1P05114 LINC00565-201ENST00000562710 2331 ntBASIC20.32■□□□□ 0.84
HMGN1P05114 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
HMGN1P05114 GALR2-201ENST00000329003 1364 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
HMGN1P05114 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
HMGN1P05114 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
HMGN1P05114 EIF5A-211ENST00000576930 1439 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
HMGN1P05114 PFDN2-201ENST00000368010 677 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
HMGN1P05114 MTX2-204ENST00000443241 799 ntTSL 3 BASIC20.31■□□□□ 0.84
HMGN1P05114 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
HMGN1P05114 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC20.31■□□□□ 0.84
HMGN1P05114 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
HMGN1P05114 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC20.31■□□□□ 0.84
HMGN1P05114 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
HMGN1P05114 EGFL8-219ENST00000333845 1310 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
HMGN1P05114 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
HMGN1P05114 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
HMGN1P05114 SSTR4-201ENST00000255008 1427 ntAPPRIS P1 BASIC20.3■□□□□ 0.84
HMGN1P05114 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC20.3■□□□□ 0.84
HMGN1P05114 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
HMGN1P05114 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
HMGN1P05114 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
HMGN1P05114 TERT-206ENST00000508104 2486 ntTSL 5 BASIC20.3■□□□□ 0.84
HMGN1P05114 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
HMGN1P05114 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
HMGN1P05114 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
HMGN1P05114 ABHD17B-202ENST00000377041 1312 ntAPPRIS P4 TSL 1 (best) BASIC20.29■□□□□ 0.84
HMGN1P05114 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
HMGN1P05114 LSR-203ENST00000360798 1963 ntTSL 2 BASIC20.29■□□□□ 0.84
HMGN1P05114 U85056.1-201ENST00000616429 682 ntBASIC20.29■□□□□ 0.84
HMGN1P05114 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC20.28■□□□□ 0.84
HMGN1P05114 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC20.28■□□□□ 0.84
HMGN1P05114 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC20.28■□□□□ 0.84
HMGN1P05114 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
HMGN1P05114 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
HMGN1P05114 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
HMGN1P05114 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
HMGN1P05114 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
HMGN1P05114 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC20.28■□□□□ 0.84
HMGN1P05114 RARRES2P2-201ENST00000394842 485 ntBASIC20.28■□□□□ 0.84
HMGN1P05114 PSMG4-207ENST00000451246 824 ntTSL 3 BASIC20.28■□□□□ 0.84
HMGN1P05114 AC139795.1-203ENST00000515045 853 ntTSL 2 BASIC20.28■□□□□ 0.84
HMGN1P05114 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC20.28■□□□□ 0.84
HMGN1P05114 TMEM171-202ENST00000454765 1535 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.84
HMGN1P05114 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
HMGN1P05114 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC20.27■□□□□ 0.84
HMGN1P05114 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.84
HMGN1P05114 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC20.27■□□□□ 0.84
HMGN1P05114 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
HMGN1P05114 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC20.27■□□□□ 0.84
HMGN1P05114 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
HMGN1P05114 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC20.27■□□□□ 0.84
HMGN1P05114 MDK-206ENST00000407067 1026 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.84
HMGN1P05114 IFI30-201ENST00000407280 1134 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
HMGN1P05114 C17orf49-201ENST00000439424 850 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.84
HMGN1P05114 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC20.27■□□□□ 0.84
HMGN1P05114 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC20.27■□□□□ 0.84
HMGN1P05114 AC242852.2-201ENST00000615738 1807 ntBASIC20.27■□□□□ 0.84
HMGN1P05114 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
HMGN1P05114 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
HMGN1P05114 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
HMGN1P05114 COMT-203ENST00000403184 2217 ntTSL 2 BASIC20.26■□□□□ 0.83
HMGN1P05114 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
HMGN1P05114 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
HMGN1P05114 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
HMGN1P05114 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
HMGN1P05114 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC20.26■□□□□ 0.83
HMGN1P05114 CST6-201ENST00000312134 759 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
HMGN1P05114 AC139795.1-202ENST00000500444 432 ntBASIC20.26■□□□□ 0.83
HMGN1P05114 NREP-216ENST00000508870 540 ntAPPRIS P1 TSL 4 BASIC20.26■□□□□ 0.83
HMGN1P05114 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC20.26■□□□□ 0.83
HMGN1P05114 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
HMGN1P05114 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC20.26■□□□□ 0.83
HMGN1P05114 AC079630.1-202ENST00000618127 1840 ntBASIC20.25■□□□□ 0.83
HMGN1P05114 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
HMGN1P05114 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
HMGN1P05114 LIME1-206ENST00000487026 805 ntAPPRIS ALT2 TSL 5 BASIC20.25■□□□□ 0.83
HMGN1P05114 ERFE-207ENST00000546354 1065 ntAPPRIS P2 TSL 1 (best) BASIC20.25■□□□□ 0.83
HMGN1P05114 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
HMGN1P05114 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC20.25■□□□□ 0.83
HMGN1P05114 MTERF3-201ENST00000287025 1409 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
HMGN1P05114 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC20.25■□□□□ 0.83
HMGN1P05114 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC20.25■□□□□ 0.83
HMGN1P05114 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC20.25■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 49.1 ms