Protein–RNA interactions for Protein: P03905

MT-ND4, NADH-ubiquinone oxidoreductase chain 4, humanhuman

Predictions only

Length 459 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-ND4P03905 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
MT-ND4P03905 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
MT-ND4P03905 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
MT-ND4P03905 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
MT-ND4P03905 TSPAN4-203ENST00000397397 1423 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
MT-ND4P03905 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
MT-ND4P03905 SLC25A24-204ENST00000569674 2357 ntBASIC19.49■□□□□ 0.71
MT-ND4P03905 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC19.49■□□□□ 0.71
MT-ND4P03905 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC19.49■□□□□ 0.71
MT-ND4P03905 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC19.49■□□□□ 0.71
MT-ND4P03905 SLC9A3-AS1-207ENST00000607286 1357 ntTSL 5 BASIC19.49■□□□□ 0.71
MT-ND4P03905 MPC1-201ENST00000341756 976 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
MT-ND4P03905 RARRES2P2-201ENST00000394842 485 ntBASIC19.49■□□□□ 0.71
MT-ND4P03905 SPCS2P3-201ENST00000500401 656 ntBASIC19.49■□□□□ 0.71
MT-ND4P03905 MPC1-206ENST00000621630 977 ntAPPRIS ALT1 TSL 5 BASIC19.49■□□□□ 0.71
MT-ND4P03905 MPC1-207ENST00000621685 1192 ntTSL 5 BASIC19.49■□□□□ 0.71
MT-ND4P03905 SAP25-204ENST00000622764 1031 ntAPPRIS ALT2 TSL 5 BASIC19.49■□□□□ 0.71
MT-ND4P03905 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
MT-ND4P03905 SSTR4-201ENST00000255008 1427 ntAPPRIS P1 BASIC19.49■□□□□ 0.71
MT-ND4P03905 RHOBTB3-206ENST00000506817 1432 ntTSL 2 BASIC19.49■□□□□ 0.71
MT-ND4P03905 MYB-221ENST00000527615 2381 ntTSL 5 BASIC19.49■□□□□ 0.71
MT-ND4P03905 RRAD-201ENST00000299759 1569 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
MT-ND4P03905 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
MT-ND4P03905 MED17-221ENST00000639724 2317 ntTSL 5 BASIC19.48■□□□□ 0.71
MT-ND4P03905 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
MT-ND4P03905 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
MT-ND4P03905 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
MT-ND4P03905 RAB20-201ENST00000267328 1518 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
MT-ND4P03905 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC19.48■□□□□ 0.71
MT-ND4P03905 NKAIN3-202ENST00000523211 1988 ntAPPRIS P1 TSL 2 BASIC19.48■□□□□ 0.71
MT-ND4P03905 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC19.48■□□□□ 0.71
MT-ND4P03905 DUSP22-201ENST00000344450 1485 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
MT-ND4P03905 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
MT-ND4P03905 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
MT-ND4P03905 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
MT-ND4P03905 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
MT-ND4P03905 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
MT-ND4P03905 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
MT-ND4P03905 HSD17B1P1-201ENST00000590052 955 ntBASIC19.47■□□□□ 0.71
MT-ND4P03905 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
MT-ND4P03905 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
MT-ND4P03905 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
MT-ND4P03905 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
MT-ND4P03905 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
MT-ND4P03905 RBM42-205ENST00000589871 1487 ntTSL 5 BASIC19.47■□□□□ 0.71
MT-ND4P03905 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
MT-ND4P03905 GPR160-201ENST00000355897 2039 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
MT-ND4P03905 JMJD8-201ENST00000412368 2038 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.71
MT-ND4P03905 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC19.46■□□□□ 0.71
MT-ND4P03905 TMEM191C-206ENST00000432134 1129 ntAPPRIS ALT2 TSL 5 BASIC19.46■□□□□ 0.71
MT-ND4P03905 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC19.46■□□□□ 0.71
MT-ND4P03905 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
MT-ND4P03905 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC19.46■□□□□ 0.71
MT-ND4P03905 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
MT-ND4P03905 CTF1-201ENST00000279804 1664 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
MT-ND4P03905 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
MT-ND4P03905 HNRNPD-203ENST00000353341 1585 ntAPPRIS ALT1 TSL 1 (best) BASIC19.45■□□□□ 0.7
MT-ND4P03905 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
MT-ND4P03905 IDNK-203ENST00000405990 629 ntTSL 2 BASIC19.45■□□□□ 0.7
MT-ND4P03905 FAM136A-202ENST00000430566 885 ntTSL 3 BASIC19.45■□□□□ 0.7
MT-ND4P03905 PXMP2-205ENST00000543589 632 ntTSL 3 BASIC19.45■□□□□ 0.7
MT-ND4P03905 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
MT-ND4P03905 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
MT-ND4P03905 COMT-203ENST00000403184 2217 ntTSL 2 BASIC19.45■□□□□ 0.7
MT-ND4P03905 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
MT-ND4P03905 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
MT-ND4P03905 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC19.45■□□□□ 0.7
MT-ND4P03905 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
MT-ND4P03905 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
MT-ND4P03905 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
MT-ND4P03905 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC19.44■□□□□ 0.7
MT-ND4P03905 C20orf24-201ENST00000342422 896 ntTSL 2 BASIC19.44■□□□□ 0.7
MT-ND4P03905 C20orf24-202ENST00000344795 1114 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
MT-ND4P03905 AC087393.1-201ENST00000582896 145 ntBASIC19.44■□□□□ 0.7
MT-ND4P03905 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC19.44■□□□□ 0.7
MT-ND4P03905 MIR6765-201ENST00000614092 87 ntBASIC19.44■□□□□ 0.7
MT-ND4P03905 GNAS-AS1_1.1-201ENST00000621898 103 ntBASIC19.44■□□□□ 0.7
MT-ND4P03905 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC19.44■□□□□ 0.7
MT-ND4P03905 ARL4D-201ENST00000320033 1612 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
MT-ND4P03905 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
MT-ND4P03905 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
MT-ND4P03905 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC19.43■□□□□ 0.7
MT-ND4P03905 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
MT-ND4P03905 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
MT-ND4P03905 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
MT-ND4P03905 RILP-201ENST00000301336 1771 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
MT-ND4P03905 DUX4L9-201ENST00000449051 1259 ntBASIC19.43■□□□□ 0.7
MT-ND4P03905 U85056.1-201ENST00000616429 682 ntBASIC19.43■□□□□ 0.7
MT-ND4P03905 DLK2-202ENST00000372485 1572 ntAPPRIS ALT1 TSL 5 BASIC19.43■□□□□ 0.7
MT-ND4P03905 PDSS1-201ENST00000376215 1626 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
MT-ND4P03905 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
MT-ND4P03905 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
MT-ND4P03905 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
MT-ND4P03905 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
MT-ND4P03905 TCEA1-211ENST00000522635 1432 ntTSL 2 BASIC19.42■□□□□ 0.7
MT-ND4P03905 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC19.42■□□□□ 0.7
MT-ND4P03905 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC19.42■□□□□ 0.7
MT-ND4P03905 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
MT-ND4P03905 BCKDHB-202ENST00000356489 1514 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
MT-ND4P03905 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 13.5 ms