Protein–RNA interactions for Protein: P01920

HLA-DQB1, HLA class II histocompatibility antigen, DQ beta 1 chain, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1P01920 VEGFA-213ENST00000482630 1146 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
HLA-DQB1P01920 VEGFA-227ENST00000615393 984 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
HLA-DQB1P01920 VEGFA-228ENST00000617771 1116 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
HLA-DQB1P01920 VEGFA-229ENST00000621747 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
HLA-DQB1P01920 VEGFA-230ENST00000640482 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
HLA-DQB1P01920 VEGFA-232ENST00000640653 1170 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
HLA-DQB1P01920 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC19.48■□□□□ 0.71
HLA-DQB1P01920 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
HLA-DQB1P01920 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
HLA-DQB1P01920 RABL6-204ENST00000371671 1580 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
HLA-DQB1P01920 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC19.48■□□□□ 0.71
HLA-DQB1P01920 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC19.48■□□□□ 0.71
HLA-DQB1P01920 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC19.48■□□□□ 0.71
HLA-DQB1P01920 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
HLA-DQB1P01920 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC19.48■□□□□ 0.71
HLA-DQB1P01920 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC19.47■□□□□ 0.71
HLA-DQB1P01920 FGD5-AS1-204ENST00000430166 1184 ntTSL 2 BASIC19.47■□□□□ 0.71
HLA-DQB1P01920 AC092296.2-201ENST00000589470 999 ntBASIC19.47■□□□□ 0.71
HLA-DQB1P01920 TSPAN4-203ENST00000397397 1423 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
HLA-DQB1P01920 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
HLA-DQB1P01920 CTSZ-201ENST00000217131 1495 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
HLA-DQB1P01920 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
HLA-DQB1P01920 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
HLA-DQB1P01920 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC19.46■□□□□ 0.71
HLA-DQB1P01920 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC19.46■□□□□ 0.71
HLA-DQB1P01920 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
HLA-DQB1P01920 BANF1-208ENST00000533166 1135 ntAPPRIS P1 TSL 2 BASIC19.46■□□□□ 0.71
HLA-DQB1P01920 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
HLA-DQB1P01920 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
HLA-DQB1P01920 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
HLA-DQB1P01920 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
HLA-DQB1P01920 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
HLA-DQB1P01920 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC19.45■□□□□ 0.7
HLA-DQB1P01920 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
HLA-DQB1P01920 TMEM260-202ENST00000538838 1638 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
HLA-DQB1P01920 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
HLA-DQB1P01920 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC19.45■□□□□ 0.7
HLA-DQB1P01920 REST-210ENST00000638187 1334 ntTSL 5 BASIC19.45■□□□□ 0.7
HLA-DQB1P01920 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC19.45■□□□□ 0.7
HLA-DQB1P01920 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
HLA-DQB1P01920 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC19.45■□□□□ 0.7
HLA-DQB1P01920 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
HLA-DQB1P01920 CD37-213ENST00000598095 1598 ntTSL 2 BASIC19.44■□□□□ 0.7
HLA-DQB1P01920 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
HLA-DQB1P01920 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC19.44■□□□□ 0.7
HLA-DQB1P01920 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
HLA-DQB1P01920 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC19.44■□□□□ 0.7
HLA-DQB1P01920 SLC25A11-201ENST00000225665 1897 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
HLA-DQB1P01920 RHOF-203ENST00000537171 1485 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
HLA-DQB1P01920 RP9P-202ENST00000450133 1212 ntBASIC19.44■□□□□ 0.7
HLA-DQB1P01920 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC19.44■□□□□ 0.7
HLA-DQB1P01920 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
HLA-DQB1P01920 ARL4D-201ENST00000320033 1612 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
HLA-DQB1P01920 AL022341.2-201ENST00000573609 1417 ntTSL 3 BASIC19.43■□□□□ 0.7
HLA-DQB1P01920 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
HLA-DQB1P01920 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC19.43■□□□□ 0.7
HLA-DQB1P01920 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
HLA-DQB1P01920 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
HLA-DQB1P01920 RAB20-201ENST00000267328 1518 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
HLA-DQB1P01920 KRT18P10-201ENST00000388836 1287 ntBASIC19.43■□□□□ 0.7
HLA-DQB1P01920 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
HLA-DQB1P01920 LINC01970-201ENST00000581489 1810 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
HLA-DQB1P01920 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
HLA-DQB1P01920 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC19.43■□□□□ 0.7
HLA-DQB1P01920 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
HLA-DQB1P01920 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
HLA-DQB1P01920 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
HLA-DQB1P01920 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
HLA-DQB1P01920 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC19.42■□□□□ 0.7
HLA-DQB1P01920 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
HLA-DQB1P01920 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
HLA-DQB1P01920 RBFA-201ENST00000262197 1219 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
HLA-DQB1P01920 ECEL1P2-201ENST00000461596 1295 ntBASIC19.42■□□□□ 0.7
HLA-DQB1P01920 PDSS1-201ENST00000376215 1626 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
HLA-DQB1P01920 CACNG2-201ENST00000300105 2384 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
HLA-DQB1P01920 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
HLA-DQB1P01920 PTH1R-202ENST00000418619 2070 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
HLA-DQB1P01920 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC19.42■□□□□ 0.7
HLA-DQB1P01920 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
HLA-DQB1P01920 PARL-202ENST00000317096 1414 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
HLA-DQB1P01920 AC092667.1-201ENST00000434301 2586 ntBASIC19.41■□□□□ 0.7
HLA-DQB1P01920 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC19.41■□□□□ 0.7
HLA-DQB1P01920 TULP1-202ENST00000322263 1941 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
HLA-DQB1P01920 HNRNPD-203ENST00000353341 1585 ntAPPRIS ALT1 TSL 1 (best) BASIC19.41■□□□□ 0.7
HLA-DQB1P01920 ANGPTL6-203ENST00000589181 1579 ntTSL 5 BASIC19.41■□□□□ 0.7
HLA-DQB1P01920 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
HLA-DQB1P01920 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
HLA-DQB1P01920 TPT1-202ENST00000379055 948 ntTSL 2 BASIC19.41■□□□□ 0.7
HLA-DQB1P01920 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
HLA-DQB1P01920 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC19.41■□□□□ 0.7
HLA-DQB1P01920 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
HLA-DQB1P01920 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC19.41■□□□□ 0.7
HLA-DQB1P01920 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC19.41■□□□□ 0.7
HLA-DQB1P01920 MATK-204ENST00000585778 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
HLA-DQB1P01920 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
HLA-DQB1P01920 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
HLA-DQB1P01920 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
HLA-DQB1P01920 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
HLA-DQB1P01920 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC19.4■□□□□ 0.7
HLA-DQB1P01920 CRNDE-206ENST00000559432 587 ntTSL 3 BASIC19.4■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 38.4 ms