Protein–RNA interactions for Protein: P01127

PDGFB, Platelet-derived growth factor subunit B, humanhuman

Predicted RBP Predictions only

Length 241 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFBP01127 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC22.98■■□□□ 1.27
PDGFBP01127 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC22.98■■□□□ 1.27
PDGFBP01127 MPST-204ENST00000404393 1329 ntTSL 5 BASIC22.98■■□□□ 1.27
PDGFBP01127 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC22.98■■□□□ 1.27
PDGFBP01127 RAB3IL1-202ENST00000394836 2284 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
PDGFBP01127 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC22.98■■□□□ 1.27
PDGFBP01127 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC22.97■■□□□ 1.27
PDGFBP01127 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC22.97■■□□□ 1.27
PDGFBP01127 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
PDGFBP01127 LHPP-203ENST00000392757 840 ntTSL 3 BASIC22.97■■□□□ 1.27
PDGFBP01127 NCF1B-203ENST00000435988 1254 ntBASIC22.97■■□□□ 1.27
PDGFBP01127 BID-214ENST00000617586 542 ntTSL 5 BASIC22.97■■□□□ 1.27
PDGFBP01127 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC22.97■■□□□ 1.27
PDGFBP01127 PIP4K2B-204ENST00000619039 5734 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
PDGFBP01127 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
PDGFBP01127 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC22.97■■□□□ 1.27
PDGFBP01127 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC22.97■■□□□ 1.27
PDGFBP01127 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
PDGFBP01127 IL15RA-207ENST00000397250 584 ntTSL 2 BASIC22.96■■□□□ 1.27
PDGFBP01127 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC22.96■■□□□ 1.27
PDGFBP01127 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
PDGFBP01127 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
PDGFBP01127 RABEP2-203ENST00000544477 1645 ntTSL 2 BASIC22.96■■□□□ 1.27
PDGFBP01127 C11orf80-210ENST00000527634 1666 ntAPPRIS ALT2 TSL 5 BASIC22.96■■□□□ 1.27
PDGFBP01127 ZDHHC16-207ENST00000393760 2014 ntAPPRIS P4 TSL 1 (best) BASIC22.96■■□□□ 1.27
PDGFBP01127 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC22.95■■□□□ 1.26
PDGFBP01127 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC22.95■■□□□ 1.26
PDGFBP01127 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC22.95■■□□□ 1.26
PDGFBP01127 AC018413.1-201ENST00000581996 1200 ntTSL 2 BASIC22.95■■□□□ 1.26
PDGFBP01127 ST7-202ENST00000323984 2142 ntTSL 5 BASIC22.94■■□□□ 1.26
PDGFBP01127 ST7-207ENST00000393449 2127 ntTSL 5 BASIC22.94■■□□□ 1.26
PDGFBP01127 TANGO2-204ENST00000401833 1920 ntTSL 5 BASIC22.94■■□□□ 1.26
PDGFBP01127 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC22.94■■□□□ 1.26
PDGFBP01127 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC22.94■■□□□ 1.26
PDGFBP01127 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC22.94■■□□□ 1.26
PDGFBP01127 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC22.94■■□□□ 1.26
PDGFBP01127 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC22.94■■□□□ 1.26
PDGFBP01127 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC22.94■■□□□ 1.26
PDGFBP01127 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC22.94■■□□□ 1.26
PDGFBP01127 RRAGC-201ENST00000373001 2732 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
PDGFBP01127 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC22.93■■□□□ 1.26
PDGFBP01127 AC141586.4-201ENST00000624558 1573 ntBASIC22.93■■□□□ 1.26
PDGFBP01127 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
PDGFBP01127 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC22.93■■□□□ 1.26
PDGFBP01127 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC22.93■■□□□ 1.26
PDGFBP01127 APTR-205ENST00000447009 902 ntTSL 2 BASIC22.93■■□□□ 1.26
PDGFBP01127 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC22.93■■□□□ 1.26
PDGFBP01127 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC22.93■■□□□ 1.26
PDGFBP01127 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC22.93■■□□□ 1.26
PDGFBP01127 MATK-201ENST00000310132 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC22.93■■□□□ 1.26
PDGFBP01127 AC133637.1-201ENST00000624115 1537 ntBASIC22.92■■□□□ 1.26
PDGFBP01127 MAD2L2-201ENST00000235310 1860 ntAPPRIS P1 TSL 2 BASIC22.92■■□□□ 1.26
PDGFBP01127 SPIRE2-205ENST00000563972 1823 ntTSL 1 (best) BASIC22.92■■□□□ 1.26
PDGFBP01127 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
PDGFBP01127 PIK3R2-207ENST00000617130 2187 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
PDGFBP01127 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
PDGFBP01127 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC22.92■■□□□ 1.26
PDGFBP01127 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC22.92■■□□□ 1.26
PDGFBP01127 AL499627.2-201ENST00000606283 725 ntBASIC22.92■■□□□ 1.26
PDGFBP01127 THRA-204ENST00000546243 1909 ntAPPRIS P1 TSL 2 BASIC22.92■■□□□ 1.26
PDGFBP01127 ROM1-201ENST00000278833 1878 ntAPPRIS P2 TSL 1 (best) BASIC22.92■■□□□ 1.26
PDGFBP01127 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC22.91■■□□□ 1.26
PDGFBP01127 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC22.91■■□□□ 1.26
PDGFBP01127 MIR663A-201ENST00000385250 93 ntBASIC22.91■■□□□ 1.26
PDGFBP01127 AC105233.4-201ENST00000642045 216 ntBASIC22.91■■□□□ 1.26
PDGFBP01127 SERF1A-202ENST00000354833 1889 ntTSL 1 (best) BASIC22.91■■□□□ 1.26
PDGFBP01127 SERF1B-201ENST00000380750 1889 ntTSL 1 (best) BASIC22.91■■□□□ 1.26
PDGFBP01127 BIN1-211ENST00000409400 2143 ntTSL 1 (best) BASIC22.91■■□□□ 1.26
PDGFBP01127 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC22.9■■□□□ 1.26
PDGFBP01127 FEV-201ENST00000295727 1879 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
PDGFBP01127 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC22.9■■□□□ 1.26
PDGFBP01127 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
PDGFBP01127 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC22.9■■□□□ 1.26
PDGFBP01127 ZNF451-202ENST00000370702 458 ntTSL 2 BASIC22.9■■□□□ 1.26
PDGFBP01127 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC22.9■■□□□ 1.26
PDGFBP01127 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC22.9■■□□□ 1.26
PDGFBP01127 TMEM104-205ENST00000582773 1740 ntTSL 2 BASIC22.9■■□□□ 1.26
PDGFBP01127 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC22.9■■□□□ 1.26
PDGFBP01127 AC004854.2-201ENST00000608450 1441 ntBASIC22.9■■□□□ 1.26
PDGFBP01127 TANGO2-214ENST00000447208 2086 ntTSL 3 BASIC22.89■■□□□ 1.26
PDGFBP01127 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC22.89■■□□□ 1.26
PDGFBP01127 CLK2-203ENST00000368361 2166 ntAPPRIS ALT1 TSL 1 (best) BASIC22.89■■□□□ 1.26
PDGFBP01127 RINL-202ENST00000591812 1910 ntAPPRIS ALT2 TSL 2 BASIC22.89■■□□□ 1.25
PDGFBP01127 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC22.89■■□□□ 1.25
PDGFBP01127 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC22.89■■□□□ 1.25
PDGFBP01127 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC22.89■■□□□ 1.25
PDGFBP01127 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC22.89■■□□□ 1.25
PDGFBP01127 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC22.89■■□□□ 1.25
PDGFBP01127 AP004607.4-201ENST00000530158 1459 ntBASIC22.89■■□□□ 1.25
PDGFBP01127 NR6A1-203ENST00000416460 1898 ntAPPRIS ALT2 TSL 1 (best) BASIC22.88■■□□□ 1.25
PDGFBP01127 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC22.88■■□□□ 1.25
PDGFBP01127 COX20-201ENST00000366528 568 ntTSL 2 BASIC22.88■■□□□ 1.25
PDGFBP01127 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC22.88■■□□□ 1.25
PDGFBP01127 WWOX-218ENST00000627394 894 ntTSL 5 BASIC22.88■■□□□ 1.25
PDGFBP01127 GAMT-205ENST00000640762 751 ntTSL 5 BASIC22.88■■□□□ 1.25
PDGFBP01127 E2F5-202ENST00000416274 1728 ntAPPRIS P4 TSL 1 (best) BASIC22.88■■□□□ 1.25
PDGFBP01127 SHD-204ENST00000599689 1729 ntTSL 5 BASIC22.88■■□□□ 1.25
PDGFBP01127 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC22.87■■□□□ 1.25
PDGFBP01127 ST3GAL5-214ENST00000638178 2034 ntTSL 5 BASIC22.87■■□□□ 1.25
PDGFBP01127 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
Retrieved 100 of 98,524 protein–RNA pairs in 51.7 ms