Protein–RNA interactions for Protein: O76070

SNCG, Gamma-synuclein, humanhuman

Predictions only

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNCGO76070 PDS5A-201ENST00000303538 7176 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
SNCGO76070 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
SNCGO76070 PPAN-202ENST00000393793 1575 ntTSL 5 BASIC15.2■□□□□ 0.02
SNCGO76070 SUGCT-209ENST00000628514 1591 ntAPPRIS P4 TSL 1 (best) BASIC15.2■□□□□ 0.02
SNCGO76070 P2RX4-203ENST00000359949 1836 ntTSL 5 BASIC15.2■□□□□ 0.02
SNCGO76070 GJC1-209ENST00000592524 1837 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
SNCGO76070 AF106564.1-201ENST00000607058 2553 ntBASIC15.2■□□□□ 0.02
SNCGO76070 GFOD1-203ENST00000379287 8751 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
SNCGO76070 SLC52A2-211ENST00000532887 2147 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
SNCGO76070 PLCB1-203ENST00000378641 7323 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
SNCGO76070 IL6R-202ENST00000368485 5914 ntAPPRIS P4 TSL 1 (best) BASIC15.2■□□□□ 0.02
SNCGO76070 AC096887.2-201ENST00000623443 1957 ntBASIC15.2■□□□□ 0.02
SNCGO76070 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC15.2■□□□□ 0.02
SNCGO76070 AMH-201ENST00000221496 1821 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
SNCGO76070 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC15.19■□□□□ 0.02
SNCGO76070 MYH14-203ENST00000425460 6811 ntAPPRIS P3 TSL 5 BASIC15.19■□□□□ 0.02
SNCGO76070 AC233723.2-201ENST00000623798 2106 ntBASIC15.19■□□□□ 0.02
SNCGO76070 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
SNCGO76070 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC15.19■□□□□ 0.02
SNCGO76070 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
SNCGO76070 AL391422.3-201ENST00000603791 2761 ntBASIC15.19■□□□□ 0.02
SNCGO76070 ADGRB2-202ENST00000373658 5414 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
SNCGO76070 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
SNCGO76070 FPGS-221ENST00000630236 2160 ntTSL 5 BASIC15.19■□□□□ 0.02
SNCGO76070 PPP2R2C-203ENST00000382599 1807 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
SNCGO76070 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC15.19■□□□□ 0.02
SNCGO76070 PKDREJ-201ENST00000253255 7693 ntAPPRIS P1 BASIC15.19■□□□□ 0.02
SNCGO76070 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
SNCGO76070 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC15.19■□□□□ 0.02
SNCGO76070 MARCKSL1-201ENST00000329421 1699 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
SNCGO76070 EPM2A-208ENST00000618445 1694 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
SNCGO76070 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC15.19■□□□□ 0.02
SNCGO76070 FBXL6-201ENST00000331890 1785 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
SNCGO76070 ARHGEF35-201ENST00000378115 2431 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
SNCGO76070 ITSN2-201ENST00000355123 6300 ntAPPRIS P4 TSL 1 (best) BASIC15.18■□□□□ 0.02
SNCGO76070 PCDH7-201ENST00000361762 6403 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
SNCGO76070 FEZ1-201ENST00000278919 1748 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
SNCGO76070 GATAD2A-202ENST00000360315 5671 ntAPPRIS P3 TSL 5 BASIC15.18■□□□□ 0.02
SNCGO76070 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
SNCGO76070 AP000802.1-201ENST00000500537 1934 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
SNCGO76070 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC15.18■□□□□ 0.02
SNCGO76070 AUTS2-202ENST00000403018 957 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
SNCGO76070 CROCCP1-201ENST00000426910 5675 ntBASIC15.18■□□□□ 0.02
SNCGO76070 ARHGAP11A-201ENST00000361627 5898 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
SNCGO76070 KAT5-208ENST00000530446 1697 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
SNCGO76070 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
SNCGO76070 RCC1L-205ENST00000618035 1409 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
SNCGO76070 ABHD12-202ENST00000376542 1725 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
SNCGO76070 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC15.17■□□□□ 0.02
SNCGO76070 BACE2-203ENST00000347667 8764 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
SNCGO76070 PCDHA7-202ENST00000525929 5221 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
SNCGO76070 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC15.17■□□□□ 0.02
SNCGO76070 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
SNCGO76070 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC15.17■□□□□ 0.02
SNCGO76070 ZBTB7C-201ENST00000535628 4818 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
SNCGO76070 CDK2AP1-203ENST00000535979 1281 ntTSL 3 BASIC15.17■□□□□ 0.02
SNCGO76070 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
SNCGO76070 FGD5-201ENST00000285046 5720 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
SNCGO76070 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
SNCGO76070 EIF5A-202ENST00000336458 1511 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
SNCGO76070 EI24-212ENST00000615917 1407 ntTSL 2 BASIC15.17■□□□□ 0.02
SNCGO76070 WWC2-AS2-201ENST00000578387 2183 ntBASIC15.17■□□□□ 0.02
SNCGO76070 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
SNCGO76070 AC127496.7-201ENST00000625110 1798 ntBASIC15.16■□□□□ 0.02
SNCGO76070 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC15.16■□□□□ 0.02
SNCGO76070 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
SNCGO76070 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
SNCGO76070 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
SNCGO76070 BBC3-203ENST00000439096 1838 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
SNCGO76070 ZNF641-205ENST00000547026 1823 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
SNCGO76070 LINC01089-207ENST00000538335 630 ntTSL 3 BASIC15.16■□□□□ 0.02
SNCGO76070 TXNL4A-208ENST00000588162 752 ntTSL 2 BASIC15.16■□□□□ 0.02
SNCGO76070 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
SNCGO76070 LRRC3-201ENST00000291592 5869 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
SNCGO76070 ADAT3-201ENST00000329478 1620 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
SNCGO76070 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC15.16■□□□□ 0.02
SNCGO76070 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
SNCGO76070 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
SNCGO76070 REEP6-201ENST00000233596 1794 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
SNCGO76070 DUSP8P3-201ENST00000399571 1760 ntBASIC15.16■□□□□ 0.02
SNCGO76070 FAM189B-210ENST00000621094 1335 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
SNCGO76070 NBPF11-205ENST00000615281 5494 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
SNCGO76070 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC15.15■□□□□ 0.02
SNCGO76070 ADAM23-201ENST00000264377 6330 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
SNCGO76070 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC15.15■□□□□ 0.02
SNCGO76070 ZBTB4-202ENST00000380599 5866 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
SNCGO76070 GATA2-AS1-202ENST00000468377 1578 ntTSL 2 BASIC15.15■□□□□ 0.02
SNCGO76070 KCMF1-201ENST00000409785 7568 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
SNCGO76070 GALC-202ENST00000393568 2054 ntTSL 2 BASIC15.15■□□□□ 0.02
SNCGO76070 TOMM40-203ENST00000426677 1725 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
SNCGO76070 NR2F1-AS1-214ENST00000607831 1963 ntTSL 2 BASIC15.15■□□□□ 0.02
SNCGO76070 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
SNCGO76070 KRT10-201ENST00000269576 2124 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
SNCGO76070 AP002365.1-201ENST00000603448 772 ntBASIC15.15■□□□□ 0.02
SNCGO76070 AL137060.1-201ENST00000618151 2648 ntBASIC15.15■□□□□ 0.02
SNCGO76070 CHST13-201ENST00000319340 1789 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
SNCGO76070 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
SNCGO76070 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
SNCGO76070 NRG2-201ENST00000289409 2535 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
SNCGO76070 CHRNB2-201ENST00000368476 5867 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 19.6 ms