Protein–RNA interactions for Protein: O60225

SSX5, Protein SSX5, humanhuman

Predictions only

Length 188 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX5O60225 MIR7108-201ENST00000614319 87 ntBASIC19.2■□□□□ 0.66
SSX5O60225 SLC25A24-204ENST00000569674 2357 ntBASIC19.2■□□□□ 0.66
SSX5O60225 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
SSX5O60225 PTH1R-202ENST00000418619 2070 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
SSX5O60225 OSCAR-202ENST00000351806 1375 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
SSX5O60225 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
SSX5O60225 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC19.19■□□□□ 0.66
SSX5O60225 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
SSX5O60225 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
SSX5O60225 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
SSX5O60225 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
SSX5O60225 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC19.19■□□□□ 0.66
SSX5O60225 FAM136A-202ENST00000430566 885 ntTSL 3 BASIC19.19■□□□□ 0.66
SSX5O60225 UBE2D2-205ENST00000505548 1113 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
SSX5O60225 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
SSX5O60225 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
SSX5O60225 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
SSX5O60225 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
SSX5O60225 ACAA1-219ENST00000625927 1760 ntTSL 5 BASIC19.19■□□□□ 0.66
SSX5O60225 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
SSX5O60225 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
SSX5O60225 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC19.18■□□□□ 0.66
SSX5O60225 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
SSX5O60225 SERINC5-203ENST00000509193 1441 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
SSX5O60225 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
SSX5O60225 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
SSX5O60225 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
SSX5O60225 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC19.18■□□□□ 0.66
SSX5O60225 MAPK3-203ENST00000395199 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
SSX5O60225 MAPK3-205ENST00000395202 1008 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
SSX5O60225 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC19.18■□□□□ 0.66
SSX5O60225 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
SSX5O60225 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
SSX5O60225 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC19.18■□□□□ 0.66
SSX5O60225 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
SSX5O60225 PON2-218ENST00000633531 1653 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SSX5O60225 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SSX5O60225 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SSX5O60225 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC19.17■□□□□ 0.66
SSX5O60225 TMUB1-203ENST00000462940 1549 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SSX5O60225 ENDOG-201ENST00000372642 1172 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SSX5O60225 AGO3-204ENST00000397828 1035 ntTSL 2 BASIC19.17■□□□□ 0.66
SSX5O60225 TSPY4-202ENST00000426950 1179 ntAPPRIS P5 TSL 5 BASIC19.17■□□□□ 0.66
SSX5O60225 ACOT12-204ENST00000513751 612 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
SSX5O60225 NKX2-5-204ENST00000521848 1027 ntTSL 2 BASIC19.17■□□□□ 0.66
SSX5O60225 AC133552.2-201ENST00000619106 1032 ntBASIC19.17■□□□□ 0.66
SSX5O60225 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SSX5O60225 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SSX5O60225 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SSX5O60225 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SSX5O60225 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
SSX5O60225 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SSX5O60225 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC19.16■□□□□ 0.66
SSX5O60225 AC127496.7-201ENST00000625110 1798 ntBASIC19.16■□□□□ 0.66
SSX5O60225 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
SSX5O60225 COMT-203ENST00000403184 2217 ntTSL 2 BASIC19.16■□□□□ 0.66
SSX5O60225 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
SSX5O60225 MED17-221ENST00000639724 2317 ntTSL 5 BASIC19.16■□□□□ 0.66
SSX5O60225 WBP1-201ENST00000233615 1294 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
SSX5O60225 AC138647.1-201ENST00000427937 648 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
SSX5O60225 HES4-202ENST00000428771 1040 ntTSL 2 BASIC19.16■□□□□ 0.66
SSX5O60225 SSSCA1-AS1-201ENST00000567594 614 ntBASIC19.16■□□□□ 0.66
SSX5O60225 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
SSX5O60225 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
SSX5O60225 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
SSX5O60225 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
SSX5O60225 PPM1J-201ENST00000309276 1863 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
SSX5O60225 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
SSX5O60225 WFDC1-201ENST00000219454 1534 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
SSX5O60225 FBXO7-206ENST00000452138 1535 ntTSL 2 BASIC19.15■□□□□ 0.66
SSX5O60225 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
SSX5O60225 B3GAT3-201ENST00000265471 1641 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
SSX5O60225 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
SSX5O60225 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
SSX5O60225 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
SSX5O60225 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
SSX5O60225 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC19.15■□□□□ 0.66
SSX5O60225 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
SSX5O60225 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
SSX5O60225 PTPMT1-203ENST00000426530 1014 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
SSX5O60225 MANF-204ENST00000528157 1153 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
SSX5O60225 LINC01970-201ENST00000581489 1810 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
SSX5O60225 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
SSX5O60225 MTERF3-204ENST00000523821 1529 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
SSX5O60225 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.66
SSX5O60225 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC19.14■□□□□ 0.65
SSX5O60225 AL592295.1-201ENST00000400984 884 ntBASIC19.14■□□□□ 0.65
SSX5O60225 GPX1-201ENST00000419349 1106 ntBASIC19.14■□□□□ 0.65
SSX5O60225 SOCS2-202ENST00000536696 1065 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.65
SSX5O60225 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC19.14■□□□□ 0.65
SSX5O60225 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
SSX5O60225 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
SSX5O60225 EI24-204ENST00000527235 1625 ntTSL 5 BASIC19.14■□□□□ 0.65
SSX5O60225 AL022069.1-201ENST00000568025 1636 ntBASIC19.14■□□□□ 0.65
SSX5O60225 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC19.14■□□□□ 0.65
SSX5O60225 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC19.14■□□□□ 0.65
SSX5O60225 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC19.14■□□□□ 0.65
SSX5O60225 ENTPD4-201ENST00000356206 2097 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
SSX5O60225 ENTPD4-203ENST00000417069 2063 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
SSX5O60225 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC19.13■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 19.2 ms