Protein–RNA interactions for Protein: O43508

TNFSF12, Tumor necrosis factor ligand superfamily member 12, humanhuman

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF12O43508 FXYD7-204ENST00000588265 636 ntTSL 2 BASIC18.67■□□□□ 0.58
TNFSF12O43508 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC18.67■□□□□ 0.58
TNFSF12O43508 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
TNFSF12O43508 CRACR2B-202ENST00000525077 1578 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
TNFSF12O43508 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
TNFSF12O43508 MOB4-204ENST00000409360 1447 ntTSL 5 BASIC18.66■□□□□ 0.58
TNFSF12O43508 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
TNFSF12O43508 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
TNFSF12O43508 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
TNFSF12O43508 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
TNFSF12O43508 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
TNFSF12O43508 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
TNFSF12O43508 CFAP77-202ENST00000393215 901 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
TNFSF12O43508 LONRF2P2-201ENST00000439212 571 ntBASIC18.66■□□□□ 0.58
TNFSF12O43508 TCEA1-213ENST00000640041 1171 ntTSL 5 BASIC18.66■□□□□ 0.58
TNFSF12O43508 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC18.66■□□□□ 0.58
TNFSF12O43508 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
TNFSF12O43508 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC18.66■□□□□ 0.58
TNFSF12O43508 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
TNFSF12O43508 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
TNFSF12O43508 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
TNFSF12O43508 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
TNFSF12O43508 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
TNFSF12O43508 PXMP2-205ENST00000543589 632 ntTSL 3 BASIC18.65■□□□□ 0.58
TNFSF12O43508 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC18.65■□□□□ 0.58
TNFSF12O43508 MADCAM1-202ENST00000346144 1309 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
TNFSF12O43508 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
TNFSF12O43508 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC18.65■□□□□ 0.58
TNFSF12O43508 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
TNFSF12O43508 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
TNFSF12O43508 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.58
TNFSF12O43508 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC18.64■□□□□ 0.58
TNFSF12O43508 PON2-218ENST00000633531 1653 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
TNFSF12O43508 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC18.64■□□□□ 0.57
TNFSF12O43508 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
TNFSF12O43508 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC18.64■□□□□ 0.57
TNFSF12O43508 LIME1-206ENST00000487026 805 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
TNFSF12O43508 U85056.1-201ENST00000616429 682 ntBASIC18.64■□□□□ 0.57
TNFSF12O43508 FP236240.1-201ENST00000619537 1116 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
TNFSF12O43508 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
TNFSF12O43508 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
TNFSF12O43508 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
TNFSF12O43508 EIF5A-211ENST00000576930 1439 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
TNFSF12O43508 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
TNFSF12O43508 G6PD-202ENST00000393562 2631 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
TNFSF12O43508 G6PD-211ENST00000621232 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
TNFSF12O43508 ENTPD4-201ENST00000356206 2097 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
TNFSF12O43508 ENTPD4-203ENST00000417069 2063 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
TNFSF12O43508 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC18.64■□□□□ 0.57
TNFSF12O43508 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
TNFSF12O43508 B3GAT3-201ENST00000265471 1641 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
TNFSF12O43508 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
TNFSF12O43508 MYDGF-201ENST00000262947 1018 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
TNFSF12O43508 RARRES2P2-201ENST00000394842 485 ntBASIC18.63■□□□□ 0.57
TNFSF12O43508 IFI30-201ENST00000407280 1134 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
TNFSF12O43508 KMT2E-AS1-201ENST00000453677 736 ntTSL 3 BASIC18.63■□□□□ 0.57
TNFSF12O43508 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
TNFSF12O43508 UBE2I-213ENST00000566587 1098 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
TNFSF12O43508 C11orf96-203ENST00000617612 1294 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
TNFSF12O43508 AC129492.7-201ENST00000622992 756 ntBASIC18.63■□□□□ 0.57
TNFSF12O43508 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
TNFSF12O43508 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
TNFSF12O43508 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
TNFSF12O43508 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
TNFSF12O43508 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC18.63■□□□□ 0.57
TNFSF12O43508 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
TNFSF12O43508 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
TNFSF12O43508 EI24-204ENST00000527235 1625 ntTSL 5 BASIC18.63■□□□□ 0.57
TNFSF12O43508 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
TNFSF12O43508 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC18.63■□□□□ 0.57
TNFSF12O43508 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC18.62■□□□□ 0.57
TNFSF12O43508 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
TNFSF12O43508 CARNMT1-201ENST00000376830 1012 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
TNFSF12O43508 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
TNFSF12O43508 AC131274.2-201ENST00000580697 1507 ntBASIC18.62■□□□□ 0.57
TNFSF12O43508 ALDH1A3-203ENST00000557963 1670 ntBASIC18.62■□□□□ 0.57
TNFSF12O43508 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC18.62■□□□□ 0.57
TNFSF12O43508 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
TNFSF12O43508 COMT-203ENST00000403184 2217 ntTSL 2 BASIC18.62■□□□□ 0.57
TNFSF12O43508 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
TNFSF12O43508 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
TNFSF12O43508 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
TNFSF12O43508 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
TNFSF12O43508 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
TNFSF12O43508 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
TNFSF12O43508 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
TNFSF12O43508 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
TNFSF12O43508 LINC00565-201ENST00000562710 2331 ntBASIC18.61■□□□□ 0.57
TNFSF12O43508 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
TNFSF12O43508 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
TNFSF12O43508 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
TNFSF12O43508 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
TNFSF12O43508 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
TNFSF12O43508 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
TNFSF12O43508 RBM33-201ENST00000287912 1404 ntTSL 2 BASIC18.61■□□□□ 0.57
TNFSF12O43508 C17orf49-201ENST00000439424 850 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
TNFSF12O43508 PSMG4-207ENST00000451246 824 ntTSL 3 BASIC18.61■□□□□ 0.57
TNFSF12O43508 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
TNFSF12O43508 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
TNFSF12O43508 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC18.61■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 84.1 ms