Protein–RNA interactions for Protein: O43159

RRP8, Ribosomal RNA-processing protein 8, humanhuman

Known RBP Predictions only

Length 456 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RRP8O43159 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
RRP8O43159 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
RRP8O43159 KLC1-225ENST00000557575 2188 ntTSL 5 BASIC21.24■□□□□ 0.99
RRP8O43159 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
RRP8O43159 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC21.24■□□□□ 0.99
RRP8O43159 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC21.24■□□□□ 0.99
RRP8O43159 TMEM191A-211ENST00000637163 1067 ntBASIC21.24■□□□□ 0.99
RRP8O43159 PTPA-202ENST00000347048 1989 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
RRP8O43159 OTUD5-202ENST00000376488 2692 ntAPPRIS ALT1 TSL 1 (best) BASIC21.24■□□□□ 0.99
RRP8O43159 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC21.24■□□□□ 0.99
RRP8O43159 GSK3A-201ENST00000222330 2188 ntAPPRIS P2 TSL 1 (best) BASIC21.24■□□□□ 0.99
RRP8O43159 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC21.24■□□□□ 0.99
RRP8O43159 GPS1-204ENST00000392358 2276 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
RRP8O43159 MSANTD2-201ENST00000239614 2495 ntTSL 2 BASIC21.23■□□□□ 0.99
RRP8O43159 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
RRP8O43159 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC21.23■□□□□ 0.99
RRP8O43159 PXK-201ENST00000302779 1974 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
RRP8O43159 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC21.23■□□□□ 0.99
RRP8O43159 MTMR1-202ENST00000370390 2755 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
RRP8O43159 YRDC-201ENST00000373044 1826 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
RRP8O43159 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
RRP8O43159 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
RRP8O43159 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC21.23■□□□□ 0.99
RRP8O43159 DLX2-202ENST00000466293 1852 ntTSL 2 BASIC21.23■□□□□ 0.99
RRP8O43159 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC21.23■□□□□ 0.99
RRP8O43159 AC096887.2-201ENST00000623443 1957 ntBASIC21.23■□□□□ 0.99
RRP8O43159 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC21.23■□□□□ 0.99
RRP8O43159 FAM66E-202ENST00000533615 2087 ntTSL 2 BASIC21.22■□□□□ 0.99
RRP8O43159 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
RRP8O43159 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
RRP8O43159 ZNF692-201ENST00000306601 1931 ntAPPRIS P3 TSL 1 (best) BASIC21.22■□□□□ 0.99
RRP8O43159 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC21.22■□□□□ 0.99
RRP8O43159 GAS2L1P2-201ENST00000436355 1356 ntBASIC21.22■□□□□ 0.99
RRP8O43159 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
RRP8O43159 TMIE-201ENST00000326431 1824 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
RRP8O43159 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC21.21■□□□□ 0.99
RRP8O43159 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC21.21■□□□□ 0.99
RRP8O43159 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
RRP8O43159 KAT8-202ENST00000448516 1789 ntTSL 1 (best) BASIC21.2■□□□□ 0.99
RRP8O43159 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
RRP8O43159 RABEP2-203ENST00000544477 1645 ntTSL 2 BASIC21.2■□□□□ 0.98
RRP8O43159 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC21.2■□□□□ 0.98
RRP8O43159 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
RRP8O43159 AC137761.2-201ENST00000561729 223 ntBASIC21.2■□□□□ 0.98
RRP8O43159 AC145350.3-201ENST00000569033 163 ntBASIC21.2■□□□□ 0.98
RRP8O43159 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC21.2■□□□□ 0.98
RRP8O43159 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC21.2■□□□□ 0.98
RRP8O43159 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
RRP8O43159 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC21.19■□□□□ 0.98
RRP8O43159 LDHB-203ENST00000396076 1538 ntAPPRIS P1 TSL 5 BASIC21.19■□□□□ 0.98
RRP8O43159 GTSE1-AS1-202ENST00000623117 1518 ntBASIC21.19■□□□□ 0.98
RRP8O43159 TP53I3-201ENST00000238721 1998 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
RRP8O43159 CAPN10-204ENST00000354082 1999 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
RRP8O43159 AC135731.1-201ENST00000569415 2548 ntBASIC21.19■□□□□ 0.98
RRP8O43159 TWF2-201ENST00000305533 1718 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
RRP8O43159 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC21.19■□□□□ 0.98
RRP8O43159 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC21.19■□□□□ 0.98
RRP8O43159 NT5C3AP1-201ENST00000394500 1012 ntBASIC21.19■□□□□ 0.98
RRP8O43159 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
RRP8O43159 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
RRP8O43159 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC21.19■□□□□ 0.98
RRP8O43159 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC21.19■□□□□ 0.98
RRP8O43159 NXPH4-201ENST00000349394 1804 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
RRP8O43159 MPST-204ENST00000404393 1329 ntTSL 5 BASIC21.19■□□□□ 0.98
RRP8O43159 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC21.19■□□□□ 0.98
RRP8O43159 GPR150-201ENST00000380007 2065 ntAPPRIS P1 BASIC21.19■□□□□ 0.98
RRP8O43159 AC141586.4-201ENST00000624558 1573 ntBASIC21.19■□□□□ 0.98
RRP8O43159 PWWP2B-201ENST00000305233 2651 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
RRP8O43159 SCARA5-204ENST00000524352 1945 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
RRP8O43159 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
RRP8O43159 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC21.18■□□□□ 0.98
RRP8O43159 LHPP-203ENST00000392757 840 ntTSL 3 BASIC21.18■□□□□ 0.98
RRP8O43159 AC006015.1-201ENST00000429970 570 ntBASIC21.18■□□□□ 0.98
RRP8O43159 AC026185.1-201ENST00000445748 174 ntBASIC21.18■□□□□ 0.98
RRP8O43159 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
RRP8O43159 AC104771.1-201ENST00000603335 964 ntBASIC21.18■□□□□ 0.98
RRP8O43159 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC21.18■□□□□ 0.98
RRP8O43159 AC073111.5-205ENST00000641717 521 ntBASIC21.18■□□□□ 0.98
RRP8O43159 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
RRP8O43159 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC21.18■□□□□ 0.98
RRP8O43159 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC21.18■□□□□ 0.98
RRP8O43159 DNMT3A-206ENST00000406659 1775 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
RRP8O43159 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
RRP8O43159 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC21.18■□□□□ 0.98
RRP8O43159 UNCX-201ENST00000316333 2048 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
RRP8O43159 ZDHHC16-207ENST00000393760 2014 ntAPPRIS P4 TSL 1 (best) BASIC21.17■□□□□ 0.98
RRP8O43159 CDC16-211ENST00000628084 2058 ntTSL 5 BASIC21.17■□□□□ 0.98
RRP8O43159 BCL7C-202ENST00000380317 2409 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
RRP8O43159 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
RRP8O43159 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC21.17■□□□□ 0.98
RRP8O43159 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC21.17■□□□□ 0.98
RRP8O43159 AC006970.2-201ENST00000450065 779 ntBASIC21.17■□□□□ 0.98
RRP8O43159 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
RRP8O43159 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC21.17■□□□□ 0.98
RRP8O43159 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC21.17■□□□□ 0.98
RRP8O43159 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC21.17■□□□□ 0.98
RRP8O43159 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC21.17■□□□□ 0.98
RRP8O43159 GNAL-201ENST00000269162 1722 ntAPPRIS P1 TSL 2 BASIC21.17■□□□□ 0.98
RRP8O43159 POU2F2-208ENST00000529952 1716 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
RRP8O43159 TMEM185A-207ENST00000600449 2840 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 42.8 ms