Protein–RNA interactions for Protein: O14646

CHD1, Chromodomain-helicase-DNA-binding protein 1, humanhuman

Predictions only

Length 1,710 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1O14646 CTSA-203ENST00000372459 1972 ntTSL 1 (best) BASIC37.28■■■■□ 3.56
CHD1O14646 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC37.28■■■■□ 3.56
CHD1O14646 AP004607.4-201ENST00000530158 1459 ntBASIC37.27■■■■□ 3.56
CHD1O14646 GLTP-201ENST00000318348 2356 ntAPPRIS P1 TSL 1 (best) BASIC37.27■■■■□ 3.56
CHD1O14646 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC37.27■■■■□ 3.56
CHD1O14646 ANKRD13D-211ENST00000511455 2139 ntAPPRIS P1 TSL 1 (best) BASIC37.27■■■■□ 3.56
CHD1O14646 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC37.27■■■■□ 3.56
CHD1O14646 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC37.27■■■■□ 3.56
CHD1O14646 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC37.27■■■■□ 3.56
CHD1O14646 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC37.26■■■■□ 3.56
CHD1O14646 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC37.26■■■■□ 3.56
CHD1O14646 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC37.26■■■■□ 3.56
CHD1O14646 C19orf47-202ENST00000392035 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC37.26■■■■□ 3.56
CHD1O14646 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC37.26■■■■□ 3.56
CHD1O14646 OR2I1P-207ENST00000453522 948 ntBASIC37.26■■■■□ 3.56
CHD1O14646 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC37.26■■■■□ 3.56
CHD1O14646 NRXN1-228ENST00000628364 2444 ntTSL 5 BASIC37.26■■■■□ 3.55
CHD1O14646 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC37.25■■■■□ 3.55
CHD1O14646 PARP1-210ENST00000629232 477 ntTSL 5 BASIC37.25■■■■□ 3.55
CHD1O14646 ADAP1-201ENST00000265846 2363 ntAPPRIS P1 TSL 1 (best) BASIC37.25■■■■□ 3.55
CHD1O14646 SERPING1-205ENST00000403558 2231 ntTSL 5 BASIC37.25■■■■□ 3.55
CHD1O14646 KAT8-206ENST00000543774 1846 ntAPPRIS P1 TSL 5 BASIC37.25■■■■□ 3.55
CHD1O14646 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC37.24■■■■□ 3.55
CHD1O14646 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC37.24■■■■□ 3.55
CHD1O14646 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC37.24■■■■□ 3.55
CHD1O14646 WSB2-201ENST00000315436 2646 ntAPPRIS P1 TSL 1 (best) BASIC37.24■■■■□ 3.55
CHD1O14646 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC37.24■■■■□ 3.55
CHD1O14646 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC37.24■■■■□ 3.55
CHD1O14646 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC37.24■■■■□ 3.55
CHD1O14646 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC37.24■■■■□ 3.55
CHD1O14646 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC37.24■■■■□ 3.55
CHD1O14646 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC37.24■■■■□ 3.55
CHD1O14646 TXNRD2-204ENST00000400521 2115 ntAPPRIS P2 TSL 1 (best) BASIC37.23■■■■□ 3.55
CHD1O14646 GPX1P1-201ENST00000388829 606 ntBASIC37.23■■■■□ 3.55
CHD1O14646 SPOCK3-221ENST00000512648 1456 ntTSL 1 (best) BASIC37.23■■■■□ 3.55
CHD1O14646 TWF2-201ENST00000305533 1718 ntAPPRIS P1 TSL 1 (best) BASIC37.23■■■■□ 3.55
CHD1O14646 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC37.23■■■■□ 3.55
CHD1O14646 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC37.22■■■■□ 3.55
CHD1O14646 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC37.22■■■■□ 3.55
CHD1O14646 ERN1-208ENST00000606895 2068 ntBASIC37.22■■■■□ 3.55
CHD1O14646 LACTB-201ENST00000261893 1972 ntAPPRIS P1 TSL 1 (best) BASIC37.22■■■■□ 3.55
CHD1O14646 UNCX-201ENST00000316333 2048 ntAPPRIS P1 TSL 1 (best) BASIC37.22■■■■□ 3.55
CHD1O14646 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC37.21■■■■□ 3.55
CHD1O14646 SLC7A5P2-201ENST00000553010 536 ntBASIC37.21■■■■□ 3.55
CHD1O14646 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC37.21■■■■□ 3.55
CHD1O14646 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC37.2■■■■□ 3.55
CHD1O14646 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC37.2■■■■□ 3.55
CHD1O14646 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC37.2■■■■□ 3.55
CHD1O14646 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC37.2■■■■□ 3.55
CHD1O14646 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC37.2■■■■□ 3.55
CHD1O14646 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC37.2■■■■□ 3.55
CHD1O14646 COX20-201ENST00000366528 568 ntTSL 2 BASIC37.19■■■■□ 3.54
CHD1O14646 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC37.19■■■■□ 3.54
CHD1O14646 AC133637.1-201ENST00000624115 1537 ntBASIC37.19■■■■□ 3.54
CHD1O14646 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC37.19■■■■□ 3.54
CHD1O14646 CT47A12-201ENST00000419982 1165 ntAPPRIS P1 TSL 1 (best) BASIC37.19■■■■□ 3.54
CHD1O14646 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC37.19■■■■□ 3.54
CHD1O14646 TESK1-201ENST00000336395 2421 ntAPPRIS P1 TSL 1 (best) BASIC37.18■■■■□ 3.54
CHD1O14646 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC37.18■■■■□ 3.54
CHD1O14646 AL022069.1-201ENST00000568025 1636 ntBASIC37.18■■■■□ 3.54
CHD1O14646 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC37.18■■■■□ 3.54
CHD1O14646 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC37.18■■■■□ 3.54
CHD1O14646 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC37.18■■■■□ 3.54
CHD1O14646 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC37.17■■■■□ 3.54
CHD1O14646 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC37.17■■■■□ 3.54
CHD1O14646 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC37.17■■■■□ 3.54
CHD1O14646 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC37.17■■■■□ 3.54
CHD1O14646 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC37.17■■■■□ 3.54
CHD1O14646 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC37.17■■■■□ 3.54
CHD1O14646 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC37.17■■■■□ 3.54
CHD1O14646 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC37.17■■■■□ 3.54
CHD1O14646 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC37.16■■■■□ 3.54
CHD1O14646 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC37.16■■■■□ 3.54
CHD1O14646 AC141586.4-201ENST00000624558 1573 ntBASIC37.16■■■■□ 3.54
CHD1O14646 SECTM1-201ENST00000269389 2235 ntAPPRIS P2 TSL 1 (best) BASIC37.16■■■■□ 3.54
CHD1O14646 RNF130-205ENST00000521389 2263 ntAPPRIS P1 TSL 1 (best) BASIC37.16■■■■□ 3.54
CHD1O14646 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC37.16■■■■□ 3.54
CHD1O14646 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC37.16■■■■□ 3.54
CHD1O14646 MROH6-211ENST00000534459 1789 ntAPPRIS ALT2 TSL 2 BASIC37.15■■■■□ 3.54
CHD1O14646 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC37.15■■■■□ 3.54
CHD1O14646 AC105233.4-201ENST00000642045 216 ntBASIC37.15■■■■□ 3.54
CHD1O14646 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC37.14■■■■□ 3.54
CHD1O14646 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC37.14■■■■□ 3.54
CHD1O14646 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC37.14■■■■□ 3.54
CHD1O14646 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC37.14■■■■□ 3.54
CHD1O14646 SHD-204ENST00000599689 1729 ntTSL 5 BASIC37.14■■■■□ 3.54
CHD1O14646 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC37.13■■■■□ 3.54
CHD1O14646 SHF-208ENST00000560734 1731 ntTSL 3 BASIC37.13■■■■□ 3.53
CHD1O14646 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC37.13■■■■□ 3.53
CHD1O14646 PDPK1-203ENST00000389224 2416 ntTSL 2 BASIC37.13■■■■□ 3.53
CHD1O14646 ROM1-201ENST00000278833 1878 ntAPPRIS P2 TSL 1 (best) BASIC37.13■■■■□ 3.53
CHD1O14646 P2RX4-203ENST00000359949 1836 ntTSL 5 BASIC37.13■■■■□ 3.53
CHD1O14646 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC37.13■■■■□ 3.53
CHD1O14646 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC37.13■■■■□ 3.53
CHD1O14646 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC37.13■■■■□ 3.53
CHD1O14646 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC37.12■■■■□ 3.53
CHD1O14646 RABEP2-203ENST00000544477 1645 ntTSL 2 BASIC37.12■■■■□ 3.53
CHD1O14646 AC008687.6-201ENST00000596318 630 ntBASIC37.12■■■■□ 3.53
CHD1O14646 SCARA5-204ENST00000524352 1945 ntTSL 1 (best) BASIC37.11■■■■□ 3.53
CHD1O14646 METTL26-203ENST00000397664 604 ntTSL 2 BASIC37.11■■■■□ 3.53
Retrieved 100 of 98,524 protein–RNA pairs in 25.3 ms