Protein–RNA interactions for Protein: O14617

AP3D1, AP-3 complex subunit delta-1, humanhuman

Predictions only

Length 1,153 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3D1O14617 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
AP3D1O14617 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
AP3D1O14617 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC20.92■□□□□ 0.94
AP3D1O14617 ALDH1A3-203ENST00000557963 1670 ntBASIC20.92■□□□□ 0.94
AP3D1O14617 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
AP3D1O14617 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
AP3D1O14617 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
AP3D1O14617 OSCAR-206ENST00000391760 629 ntTSL 2 BASIC20.91■□□□□ 0.94
AP3D1O14617 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC20.91■□□□□ 0.94
AP3D1O14617 C9orf163-202ENST00000624034 2573 ntBASIC20.91■□□□□ 0.94
AP3D1O14617 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
AP3D1O14617 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
AP3D1O14617 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC20.9■□□□□ 0.94
AP3D1O14617 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
AP3D1O14617 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC20.9■□□□□ 0.94
AP3D1O14617 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
AP3D1O14617 AC092068.2-201ENST00000590491 1708 ntBASIC20.9■□□□□ 0.94
AP3D1O14617 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC20.9■□□□□ 0.94
AP3D1O14617 TMEM238-201ENST00000444469 1000 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
AP3D1O14617 TK2-216ENST00000564917 1156 ntTSL 3 BASIC20.9■□□□□ 0.94
AP3D1O14617 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC20.9■□□□□ 0.94
AP3D1O14617 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
AP3D1O14617 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC20.9■□□□□ 0.94
AP3D1O14617 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
AP3D1O14617 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC20.9■□□□□ 0.94
AP3D1O14617 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
AP3D1O14617 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
AP3D1O14617 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
AP3D1O14617 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC20.89■□□□□ 0.94
AP3D1O14617 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC20.89■□□□□ 0.94
AP3D1O14617 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC20.89■□□□□ 0.94
AP3D1O14617 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
AP3D1O14617 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC20.89■□□□□ 0.93
AP3D1O14617 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
AP3D1O14617 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC20.89■□□□□ 0.93
AP3D1O14617 EI24-204ENST00000527235 1625 ntTSL 5 BASIC20.89■□□□□ 0.93
AP3D1O14617 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC20.88■□□□□ 0.93
AP3D1O14617 PPP4C-214ENST00000627746 1301 ntTSL 5 BASIC20.88■□□□□ 0.93
AP3D1O14617 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
AP3D1O14617 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
AP3D1O14617 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
AP3D1O14617 BOD1-202ENST00000311086 1562 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
AP3D1O14617 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
AP3D1O14617 ACAA1-219ENST00000625927 1760 ntTSL 5 BASIC20.87■□□□□ 0.93
AP3D1O14617 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
AP3D1O14617 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC20.87■□□□□ 0.93
AP3D1O14617 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
AP3D1O14617 ST8SIA6-201ENST00000377602 2276 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
AP3D1O14617 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
AP3D1O14617 RARRES2P1-201ENST00000474487 481 ntBASIC20.87■□□□□ 0.93
AP3D1O14617 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC20.87■□□□□ 0.93
AP3D1O14617 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC20.87■□□□□ 0.93
AP3D1O14617 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
AP3D1O14617 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC20.87■□□□□ 0.93
AP3D1O14617 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
AP3D1O14617 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
AP3D1O14617 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC20.87■□□□□ 0.93
AP3D1O14617 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
AP3D1O14617 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
AP3D1O14617 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC20.87■□□□□ 0.93
AP3D1O14617 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC20.87■□□□□ 0.93
AP3D1O14617 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
AP3D1O14617 PON2-218ENST00000633531 1653 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
AP3D1O14617 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
AP3D1O14617 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
AP3D1O14617 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC20.86■□□□□ 0.93
AP3D1O14617 FAHD1-204ENST00000615972 757 ntTSL 5 BASIC20.86■□□□□ 0.93
AP3D1O14617 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC20.86■□□□□ 0.93
AP3D1O14617 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
AP3D1O14617 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
AP3D1O14617 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC20.86■□□□□ 0.93
AP3D1O14617 NKX2-1-201ENST00000354822 2191 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
AP3D1O14617 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
AP3D1O14617 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
AP3D1O14617 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC20.85■□□□□ 0.93
AP3D1O14617 AKT1-201ENST00000349310 2866 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
AP3D1O14617 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
AP3D1O14617 TPI1-210ENST00000613953 1460 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
AP3D1O14617 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
AP3D1O14617 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC20.85■□□□□ 0.93
AP3D1O14617 B3GAT3-201ENST00000265471 1641 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
AP3D1O14617 MAGED2-206ENST00000375068 2189 ntAPPRIS P2 TSL 1 (best) BASIC20.85■□□□□ 0.93
AP3D1O14617 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC20.85■□□□□ 0.93
AP3D1O14617 DUSP8P3-201ENST00000399571 1760 ntBASIC20.85■□□□□ 0.93
AP3D1O14617 RBM4B-203ENST00000525754 2339 ntAPPRIS P1 TSL 2 BASIC20.84■□□□□ 0.93
AP3D1O14617 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
AP3D1O14617 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
AP3D1O14617 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC20.84■□□□□ 0.93
AP3D1O14617 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC20.84■□□□□ 0.93
AP3D1O14617 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC20.84■□□□□ 0.93
AP3D1O14617 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC20.84■□□□□ 0.93
AP3D1O14617 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
AP3D1O14617 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC20.84■□□□□ 0.93
AP3D1O14617 AC004448.1-201ENST00000458332 883 ntBASIC20.84■□□□□ 0.93
AP3D1O14617 ST20-MTHFS-201ENST00000479961 859 ntAPPRIS P1 TSL 3 BASIC20.84■□□□□ 0.93
AP3D1O14617 PRR7-204ENST00000510492 1285 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
AP3D1O14617 TTLL1-201ENST00000266254 1645 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
AP3D1O14617 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC20.84■□□□□ 0.93
AP3D1O14617 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC20.84■□□□□ 0.93
AP3D1O14617 PTGES2-202ENST00000338961 2331 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 13.3 ms