Protein–RNA interactions for Protein: O14493

CLDN4, Claudin-4, humanhuman

Predictions only

Length 209 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN4O14493 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
CLDN4O14493 GATM-206ENST00000558336 1522 ntTSL 2 BASIC21.17■□□□□ 0.98
CLDN4O14493 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC21.17■□□□□ 0.98
CLDN4O14493 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
CLDN4O14493 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
CLDN4O14493 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC21.17■□□□□ 0.98
CLDN4O14493 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC21.17■□□□□ 0.98
CLDN4O14493 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
CLDN4O14493 MCUB-201ENST00000394650 2278 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
CLDN4O14493 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC21.16■□□□□ 0.98
CLDN4O14493 C17orf82-201ENST00000623772 1530 ntBASIC21.16■□□□□ 0.98
CLDN4O14493 AL136116.3-201ENST00000402907 1138 ntBASIC21.16■□□□□ 0.98
CLDN4O14493 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC21.16■□□□□ 0.98
CLDN4O14493 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC21.16■□□□□ 0.98
CLDN4O14493 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC21.16■□□□□ 0.98
CLDN4O14493 MIR4466-201ENST00000606121 54 ntBASIC21.16■□□□□ 0.98
CLDN4O14493 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC21.16■□□□□ 0.98
CLDN4O14493 KHSRP-201ENST00000398148 2993 ntAPPRIS P2 TSL 1 (best) BASIC21.16■□□□□ 0.98
CLDN4O14493 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
CLDN4O14493 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
CLDN4O14493 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
CLDN4O14493 GALNT12-201ENST00000375011 2735 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CLDN4O14493 FZD9-201ENST00000344575 2338 ntAPPRIS P1 BASIC21.15■□□□□ 0.98
CLDN4O14493 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC21.15■□□□□ 0.98
CLDN4O14493 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
CLDN4O14493 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC21.15■□□□□ 0.98
CLDN4O14493 AC092171.4-201ENST00000609130 632 ntBASIC21.15■□□□□ 0.98
CLDN4O14493 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC21.15■□□□□ 0.98
CLDN4O14493 CPLX1-203ENST00000505203 2011 ntTSL 2 BASIC21.15■□□□□ 0.98
CLDN4O14493 EML2-209ENST00000587152 2763 ntAPPRIS ALT2 TSL 2 BASIC21.15■□□□□ 0.98
CLDN4O14493 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC21.15■□□□□ 0.98
CLDN4O14493 PTH1R-201ENST00000313049 2123 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
CLDN4O14493 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.98
CLDN4O14493 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC21.14■□□□□ 0.97
CLDN4O14493 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC21.14■□□□□ 0.97
CLDN4O14493 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC21.14■□□□□ 0.97
CLDN4O14493 AC241377.3-202ENST00000626088 1088 ntBASIC21.14■□□□□ 0.97
CLDN4O14493 AC241585.3-202ENST00000628937 1088 ntBASIC21.14■□□□□ 0.97
CLDN4O14493 AC245100.8-202ENST00000629247 1058 ntBASIC21.14■□□□□ 0.97
CLDN4O14493 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
CLDN4O14493 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
CLDN4O14493 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC21.14■□□□□ 0.97
CLDN4O14493 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC21.13■□□□□ 0.97
CLDN4O14493 FP325331.1-202ENST00000623531 1380 ntBASIC21.13■□□□□ 0.97
CLDN4O14493 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
CLDN4O14493 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
CLDN4O14493 PEMT-206ENST00000435340 960 ntTSL 5 BASIC21.13■□□□□ 0.97
CLDN4O14493 NKILA-201ENST00000613231 537 ntTSL 4 BASIC21.13■□□□□ 0.97
CLDN4O14493 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC21.13■□□□□ 0.97
CLDN4O14493 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
CLDN4O14493 NECTIN2-202ENST00000252485 2112 ntAPPRIS P3 TSL 1 (best) BASIC21.13■□□□□ 0.97
CLDN4O14493 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
CLDN4O14493 PCOLCE2-201ENST00000295992 2021 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
CLDN4O14493 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
CLDN4O14493 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC21.12■□□□□ 0.97
CLDN4O14493 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
CLDN4O14493 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
CLDN4O14493 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
CLDN4O14493 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC21.12■□□□□ 0.97
CLDN4O14493 NR2F6-201ENST00000291442 2404 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
CLDN4O14493 ID4-201ENST00000378700 2344 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
CLDN4O14493 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
CLDN4O14493 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC21.11■□□□□ 0.97
CLDN4O14493 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC21.11■□□□□ 0.97
CLDN4O14493 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC21.11■□□□□ 0.97
CLDN4O14493 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
CLDN4O14493 AC144652.1-201ENST00000609974 1624 ntBASIC21.11■□□□□ 0.97
CLDN4O14493 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
CLDN4O14493 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
CLDN4O14493 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
CLDN4O14493 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC21.1■□□□□ 0.97
CLDN4O14493 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
CLDN4O14493 MBOAT7-205ENST00000431666 2471 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
CLDN4O14493 THRA-202ENST00000394121 2260 ntTSL 2 BASIC21.1■□□□□ 0.97
CLDN4O14493 TMEM102-201ENST00000323206 1973 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
CLDN4O14493 TMEM102-202ENST00000396568 1962 ntAPPRIS P1 TSL 2 BASIC21.1■□□□□ 0.97
CLDN4O14493 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC21.1■□□□□ 0.97
CLDN4O14493 ZFP91-CNTF-201ENST00000389919 2319 ntAPPRIS P5 TSL 2 BASIC21.1■□□□□ 0.97
CLDN4O14493 DACT3-202ENST00000391916 2834 ntAPPRIS P1 TSL 5 BASIC21.1■□□□□ 0.97
CLDN4O14493 TMEM44-202ENST00000347147 2245 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
CLDN4O14493 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
CLDN4O14493 VGF-203ENST00000611537 1622 ntTSL 5 BASIC21.09■□□□□ 0.97
CLDN4O14493 C11orf91-201ENST00000379011 811 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
CLDN4O14493 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
CLDN4O14493 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC21.09■□□□□ 0.97
CLDN4O14493 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC21.09■□□□□ 0.97
CLDN4O14493 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC21.09■□□□□ 0.97
CLDN4O14493 P4HA3-201ENST00000331597 2274 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
CLDN4O14493 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC21.08■□□□□ 0.97
CLDN4O14493 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC21.08■□□□□ 0.97
CLDN4O14493 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC21.08■□□□□ 0.97
CLDN4O14493 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
CLDN4O14493 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
CLDN4O14493 KRTAP5-4-201ENST00000399682 1181 ntAPPRIS P5 BASIC21.08■□□□□ 0.97
CLDN4O14493 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
CLDN4O14493 DUX4L19-201ENST00000557448 1267 ntBASIC21.08■□□□□ 0.97
CLDN4O14493 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
CLDN4O14493 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC21.08■□□□□ 0.96
CLDN4O14493 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC21.08■□□□□ 0.96
CLDN4O14493 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC21.08■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 19 ms