Protein–RNA interactions for Protein: O00305

CACNB4, Voltage-dependent L-type calcium channel subunit beta-4, humanhuman

Predicted RBP Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB4O00305 ALDH16A1-203ENST00000540132 2174 ntTSL 2 BASIC22.25■■□□□ 1.15
CACNB4O00305 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
CACNB4O00305 GJC1-209ENST00000592524 1837 ntAPPRIS P1 TSL 2 BASIC22.24■■□□□ 1.15
CACNB4O00305 TTLL1-201ENST00000266254 1645 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
CACNB4O00305 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC22.24■■□□□ 1.15
CACNB4O00305 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC22.24■■□□□ 1.15
CACNB4O00305 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC22.24■■□□□ 1.15
CACNB4O00305 PON2-218ENST00000633531 1653 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
CACNB4O00305 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC22.24■■□□□ 1.15
CACNB4O00305 SHD-204ENST00000599689 1729 ntTSL 5 BASIC22.24■■□□□ 1.15
CACNB4O00305 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
CACNB4O00305 HES6-206ENST00000409574 738 ntTSL 2 BASIC22.24■■□□□ 1.15
CACNB4O00305 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
CACNB4O00305 SUDS3P1-201ENST00000505831 966 ntBASIC22.24■■□□□ 1.15
CACNB4O00305 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC22.24■■□□□ 1.15
CACNB4O00305 TSKU-201ENST00000333090 2712 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
CACNB4O00305 PKM-204ENST00000449901 2526 ntTSL 2 BASIC22.24■■□□□ 1.15
CACNB4O00305 GJD4-201ENST00000321660 1580 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
CACNB4O00305 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
CACNB4O00305 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC22.24■■□□□ 1.15
CACNB4O00305 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC22.24■■□□□ 1.15
CACNB4O00305 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
CACNB4O00305 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC22.23■■□□□ 1.15
CACNB4O00305 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
CACNB4O00305 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC22.23■■□□□ 1.15
CACNB4O00305 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
CACNB4O00305 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC22.23■■□□□ 1.15
CACNB4O00305 B3GAT3-201ENST00000265471 1641 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
CACNB4O00305 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
CACNB4O00305 R3HDM4-203ENST00000587975 1765 ntTSL 3 BASIC22.22■■□□□ 1.15
CACNB4O00305 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
CACNB4O00305 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
CACNB4O00305 ADIPOR1-201ENST00000340990 2177 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
CACNB4O00305 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC22.22■■□□□ 1.15
CACNB4O00305 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
CACNB4O00305 TMEM185A-208ENST00000611119 2662 ntTSL 2 BASIC22.22■■□□□ 1.15
CACNB4O00305 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC22.22■■□□□ 1.15
CACNB4O00305 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
CACNB4O00305 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC22.22■■□□□ 1.15
CACNB4O00305 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC22.22■■□□□ 1.15
CACNB4O00305 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
CACNB4O00305 EBPL-204ENST00000378272 766 ntTSL 3 BASIC22.22■■□□□ 1.15
CACNB4O00305 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC22.22■■□□□ 1.15
CACNB4O00305 MIR3181-201ENST00000578512 73 ntBASIC22.22■■□□□ 1.15
CACNB4O00305 DYRK1B-201ENST00000323039 2535 ntAPPRIS P3 TSL 1 (best) BASIC22.22■■□□□ 1.15
CACNB4O00305 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
CACNB4O00305 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC22.22■■□□□ 1.15
CACNB4O00305 EGR4-201ENST00000436467 2377 ntAPPRIS ALT2 TSL 1 (best) BASIC22.21■■□□□ 1.15
CACNB4O00305 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC22.21■■□□□ 1.15
CACNB4O00305 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC22.21■■□□□ 1.15
CACNB4O00305 AF213884.3-201ENST00000563833 479 ntBASIC22.21■■□□□ 1.15
CACNB4O00305 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC22.21■■□□□ 1.15
CACNB4O00305 pRNA.6-201ENST00000610482 90 ntBASIC22.21■■□□□ 1.15
CACNB4O00305 pRNA.5-201ENST00000612139 90 ntBASIC22.21■■□□□ 1.15
CACNB4O00305 pRNA.11-201ENST00000618423 90 ntBASIC22.21■■□□□ 1.15
CACNB4O00305 pRNA.13-201ENST00000619112 90 ntBASIC22.21■■□□□ 1.15
CACNB4O00305 AC136469.2-201ENST00000623944 1028 ntBASIC22.21■■□□□ 1.15
CACNB4O00305 ZFYVE28-202ENST00000503000 1874 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
CACNB4O00305 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
CACNB4O00305 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC22.21■■□□□ 1.15
CACNB4O00305 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
CACNB4O00305 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC22.2■■□□□ 1.14
CACNB4O00305 NHLRC4-201ENST00000424439 2097 ntAPPRIS P1 TSL 3 BASIC22.2■■□□□ 1.14
CACNB4O00305 ASB1-202ENST00000409297 878 ntTSL 5 BASIC22.2■■□□□ 1.14
CACNB4O00305 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC22.2■■□□□ 1.14
CACNB4O00305 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC22.2■■□□□ 1.14
CACNB4O00305 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC22.2■■□□□ 1.14
CACNB4O00305 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC22.2■■□□□ 1.14
CACNB4O00305 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
CACNB4O00305 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
CACNB4O00305 NAGLU-201ENST00000225927 2544 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
CACNB4O00305 MIR935-201ENST00000401179 91 ntBASIC22.19■■□□□ 1.14
CACNB4O00305 AP001330.3-201ENST00000520123 633 ntBASIC22.19■■□□□ 1.14
CACNB4O00305 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
CACNB4O00305 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC22.19■■□□□ 1.14
CACNB4O00305 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
CACNB4O00305 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
CACNB4O00305 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
CACNB4O00305 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
CACNB4O00305 SLC9A3-203ENST00000514375 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC22.19■■□□□ 1.14
CACNB4O00305 ST3GAL5-269ENST00000640992 2292 ntAPPRIS ALT2 TSL 5 BASIC22.18■■□□□ 1.14
CACNB4O00305 ABHD8-201ENST00000247706 2090 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
CACNB4O00305 PTPN2-202ENST00000327283 1706 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
CACNB4O00305 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
CACNB4O00305 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
CACNB4O00305 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
CACNB4O00305 MIR939-201ENST00000401314 82 ntBASIC22.18■■□□□ 1.14
CACNB4O00305 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC22.18■■□□□ 1.14
CACNB4O00305 AL136967.2-201ENST00000623968 743 ntBASIC22.18■■□□□ 1.14
CACNB4O00305 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
CACNB4O00305 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC22.17■■□□□ 1.14
CACNB4O00305 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC22.17■■□□□ 1.14
CACNB4O00305 NECTIN2-202ENST00000252485 2112 ntAPPRIS P3 TSL 1 (best) BASIC22.17■■□□□ 1.14
CACNB4O00305 HYI-206ENST00000372434 1025 ntTSL 5 BASIC22.17■■□□□ 1.14
CACNB4O00305 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
CACNB4O00305 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
CACNB4O00305 AC091305.1-201ENST00000479476 895 ntBASIC22.17■■□□□ 1.14
CACNB4O00305 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC22.17■■□□□ 1.14
CACNB4O00305 CACNA1H-201ENST00000348261 8208 ntAPPRIS P4 TSL 1 (best) BASIC22.17■■□□□ 1.14
CACNB4O00305 SMOX-201ENST00000278795 2164 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
Retrieved 100 of 98,524 protein–RNA pairs in 34.6 ms