Protein–RNA interactions for Protein: O00148

DDX39A, ATP-dependent RNA helicase DDX39A, humanhuman

Known RBP Predictions only

Length 427 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39AO00148 DUX4L19-201ENST00000557448 1267 ntBASIC25.35■■□□□ 1.65
DDX39AO00148 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC25.35■■□□□ 1.65
DDX39AO00148 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC25.35■■□□□ 1.65
DDX39AO00148 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC25.35■■□□□ 1.65
DDX39AO00148 ZDHHC1-201ENST00000348579 2047 ntAPPRIS P2 TSL 1 (best) BASIC25.35■■□□□ 1.65
DDX39AO00148 SH2D3A-202ENST00000437152 2013 ntTSL 2 BASIC25.35■■□□□ 1.65
DDX39AO00148 PURG-202ENST00000475541 2875 ntAPPRIS P1 BASIC25.34■■□□□ 1.65
DDX39AO00148 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
DDX39AO00148 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC25.34■■□□□ 1.65
DDX39AO00148 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC25.34■■□□□ 1.65
DDX39AO00148 AC241377.3-202ENST00000626088 1088 ntBASIC25.34■■□□□ 1.65
DDX39AO00148 AC241585.3-202ENST00000628937 1088 ntBASIC25.34■■□□□ 1.65
DDX39AO00148 AC245100.8-202ENST00000629247 1058 ntBASIC25.34■■□□□ 1.65
DDX39AO00148 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC25.34■■□□□ 1.65
DDX39AO00148 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC25.34■■□□□ 1.65
DDX39AO00148 GALNT12-201ENST00000375011 2735 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
DDX39AO00148 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC25.34■■□□□ 1.65
DDX39AO00148 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC25.33■■□□□ 1.65
DDX39AO00148 QKI-207ENST00000453779 5685 ntTSL 1 (best) BASIC25.33■■□□□ 1.65
DDX39AO00148 ID2-201ENST00000234091 2041 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.65
DDX39AO00148 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC25.33■■□□□ 1.65
DDX39AO00148 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC25.33■■□□□ 1.65
DDX39AO00148 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC25.33■■□□□ 1.65
DDX39AO00148 KISS1R-201ENST00000234371 1625 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.65
DDX39AO00148 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
DDX39AO00148 RNF223-201ENST00000453464 1902 ntAPPRIS P1 TSL 2 BASIC25.32■■□□□ 1.64
DDX39AO00148 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC25.32■■□□□ 1.64
DDX39AO00148 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC25.32■■□□□ 1.64
DDX39AO00148 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC25.32■■□□□ 1.64
DDX39AO00148 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC25.31■■□□□ 1.64
DDX39AO00148 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
DDX39AO00148 BCL2L12-212ENST00000616144 1854 ntAPPRIS P3 TSL 1 (best) BASIC25.31■■□□□ 1.64
DDX39AO00148 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC25.31■■□□□ 1.64
DDX39AO00148 DTNB-206ENST00000404103 2384 ntAPPRIS ALT2 TSL 5 BASIC25.31■■□□□ 1.64
DDX39AO00148 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC25.31■■□□□ 1.64
DDX39AO00148 ENTPD4-201ENST00000356206 2097 ntTSL 1 (best) BASIC25.3■■□□□ 1.64
DDX39AO00148 ENTPD4-203ENST00000417069 2063 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
DDX39AO00148 C5orf58-204ENST00000521850 2113 ntAPPRIS ALT2 TSL 1 (best) BASIC25.3■■□□□ 1.64
DDX39AO00148 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC25.3■■□□□ 1.64
DDX39AO00148 PTMA-205ENST00000410064 814 ntTSL 2 BASIC25.3■■□□□ 1.64
DDX39AO00148 MIR4767-201ENST00000582827 78 ntBASIC25.3■■□□□ 1.64
DDX39AO00148 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC25.3■■□□□ 1.64
DDX39AO00148 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC25.3■■□□□ 1.64
DDX39AO00148 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC25.3■■□□□ 1.64
DDX39AO00148 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC25.3■■□□□ 1.64
DDX39AO00148 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
DDX39AO00148 NOCT-201ENST00000280614 1952 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
DDX39AO00148 TMEM256-PLSCR3-204ENST00000573331 2557 ntAPPRIS P5 TSL 2 BASIC25.29■■□□□ 1.64
DDX39AO00148 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC25.29■■□□□ 1.64
DDX39AO00148 SF1-220ENST00000626028 704 ntTSL 2 BASIC25.29■■□□□ 1.64
DDX39AO00148 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC25.29■■□□□ 1.64
DDX39AO00148 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC25.29■■□□□ 1.64
DDX39AO00148 CAMK2N1-201ENST00000375078 2336 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
DDX39AO00148 AK8-201ENST00000298545 2072 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
DDX39AO00148 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
DDX39AO00148 CAPN10-207ENST00000391984 2644 ntAPPRIS P2 TSL 1 (best) BASIC25.28■■□□□ 1.64
DDX39AO00148 BSPRY-201ENST00000374183 2339 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
DDX39AO00148 AC133561.4-201ENST00000566112 224 ntBASIC25.28■■□□□ 1.64
DDX39AO00148 MIR3181-201ENST00000578512 73 ntBASIC25.28■■□□□ 1.64
DDX39AO00148 AL031432.3-201ENST00000607698 485 ntBASIC25.28■■□□□ 1.64
DDX39AO00148 pRNA.6-201ENST00000610482 90 ntBASIC25.28■■□□□ 1.64
DDX39AO00148 pRNA.5-201ENST00000612139 90 ntBASIC25.28■■□□□ 1.64
DDX39AO00148 pRNA.11-201ENST00000618423 90 ntBASIC25.28■■□□□ 1.64
DDX39AO00148 pRNA.13-201ENST00000619112 90 ntBASIC25.28■■□□□ 1.64
DDX39AO00148 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
DDX39AO00148 EML2-209ENST00000587152 2763 ntAPPRIS ALT2 TSL 2 BASIC25.27■■□□□ 1.64
DDX39AO00148 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC25.27■■□□□ 1.64
DDX39AO00148 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC25.27■■□□□ 1.64
DDX39AO00148 AC142381.2-201ENST00000566120 298 ntBASIC25.27■■□□□ 1.64
DDX39AO00148 GRAMD4P4-201ENST00000613563 1115 ntBASIC25.27■■□□□ 1.64
DDX39AO00148 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
DDX39AO00148 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC25.27■■□□□ 1.64
DDX39AO00148 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
DDX39AO00148 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC25.27■■□□□ 1.64
DDX39AO00148 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
DDX39AO00148 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC25.26■■□□□ 1.63
DDX39AO00148 ZFP91-CNTF-201ENST00000389919 2319 ntAPPRIS P5 TSL 2 BASIC25.26■■□□□ 1.63
DDX39AO00148 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
DDX39AO00148 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC25.26■■□□□ 1.63
DDX39AO00148 C1QL2-201ENST00000272520 2043 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
DDX39AO00148 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC25.26■■□□□ 1.63
DDX39AO00148 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC25.26■■□□□ 1.63
DDX39AO00148 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC25.26■■□□□ 1.63
DDX39AO00148 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC25.26■■□□□ 1.63
DDX39AO00148 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC25.26■■□□□ 1.63
DDX39AO00148 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC25.26■■□□□ 1.63
DDX39AO00148 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC25.26■■□□□ 1.63
DDX39AO00148 HES6-206ENST00000409574 738 ntTSL 2 BASIC25.25■■□□□ 1.63
DDX39AO00148 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC25.25■■□□□ 1.63
DDX39AO00148 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC25.25■■□□□ 1.63
DDX39AO00148 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC25.25■■□□□ 1.63
DDX39AO00148 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC25.25■■□□□ 1.63
DDX39AO00148 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC25.25■■□□□ 1.63
DDX39AO00148 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC25.25■■□□□ 1.63
DDX39AO00148 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC25.25■■□□□ 1.63
DDX39AO00148 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC25.25■■□□□ 1.63
DDX39AO00148 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC25.25■■□□□ 1.63
DDX39AO00148 DEAF1-201ENST00000382409 2500 ntAPPRIS P1 TSL 1 (best) BASIC25.25■■□□□ 1.63
DDX39AO00148 TMEM102-201ENST00000323206 1973 ntAPPRIS P1 TSL 1 (best) BASIC25.24■■□□□ 1.63
DDX39AO00148 TMEM102-202ENST00000396568 1962 ntAPPRIS P1 TSL 2 BASIC25.24■■□□□ 1.63
Retrieved 100 of 98,524 protein–RNA pairs in 83.9 ms