Protein–RNA interactions for Protein: A6NL88

SHISA7, Protein shisa-7, humanhuman

Predictions only

Length 538 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA7A6NL88 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC23■■□□□ 1.27
SHISA7A6NL88 RAB40C-204ENST00000538492 2569 ntAPPRIS P1 TSL 2 BASIC23■■□□□ 1.27
SHISA7A6NL88 HDGF-201ENST00000357325 2380 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
SHISA7A6NL88 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
SHISA7A6NL88 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC23■■□□□ 1.27
SHISA7A6NL88 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC23■■□□□ 1.27
SHISA7A6NL88 ALDH1A3-203ENST00000557963 1670 ntBASIC23■■□□□ 1.27
SHISA7A6NL88 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC23■■□□□ 1.27
SHISA7A6NL88 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
SHISA7A6NL88 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC22.99■■□□□ 1.27
SHISA7A6NL88 KLF15-201ENST00000296233 2574 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
SHISA7A6NL88 SLC35B2-202ENST00000393812 2043 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
SHISA7A6NL88 FNTA-201ENST00000302279 1840 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
SHISA7A6NL88 JAG2-201ENST00000331782 5835 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
SHISA7A6NL88 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC22.99■■□□□ 1.27
SHISA7A6NL88 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC22.99■■□□□ 1.27
SHISA7A6NL88 NTF6G-201ENST00000591094 616 ntBASIC22.99■■□□□ 1.27
SHISA7A6NL88 AL354811.1-201ENST00000610286 706 ntBASIC22.99■■□□□ 1.27
SHISA7A6NL88 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC22.99■■□□□ 1.27
SHISA7A6NL88 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
SHISA7A6NL88 C9orf40-201ENST00000376854 2327 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
SHISA7A6NL88 ADORA2B-201ENST00000304222 1735 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
SHISA7A6NL88 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC22.99■■□□□ 1.27
SHISA7A6NL88 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC22.99■■□□□ 1.27
SHISA7A6NL88 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC22.98■■□□□ 1.27
SHISA7A6NL88 RFLNA-205ENST00000546355 2354 ntAPPRIS ALT1 TSL 1 (best) BASIC22.98■■□□□ 1.27
SHISA7A6NL88 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
SHISA7A6NL88 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC22.98■■□□□ 1.27
SHISA7A6NL88 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC22.98■■□□□ 1.27
SHISA7A6NL88 AC010525.1-201ENST00000585559 441 ntBASIC22.98■■□□□ 1.27
SHISA7A6NL88 NXPH3-201ENST00000328741 2179 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
SHISA7A6NL88 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC22.98■■□□□ 1.27
SHISA7A6NL88 SLC16A11-202ENST00000447225 1779 ntAPPRIS ALT2 TSL 5 BASIC22.98■■□□□ 1.27
SHISA7A6NL88 WNT11-201ENST00000322563 1930 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
SHISA7A6NL88 EI24-204ENST00000527235 1625 ntTSL 5 BASIC22.97■■□□□ 1.27
SHISA7A6NL88 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC22.97■■□□□ 1.27
SHISA7A6NL88 ROM1-201ENST00000278833 1878 ntAPPRIS P2 TSL 1 (best) BASIC22.97■■□□□ 1.27
SHISA7A6NL88 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
SHISA7A6NL88 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC22.97■■□□□ 1.27
SHISA7A6NL88 KRT18P14-201ENST00000534205 1250 ntBASIC22.97■■□□□ 1.27
SHISA7A6NL88 HOXB3-201ENST00000311626 2642 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
SHISA7A6NL88 TTLL1-201ENST00000266254 1645 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
SHISA7A6NL88 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC22.97■■□□□ 1.27
SHISA7A6NL88 DHRS13-202ENST00000394901 2037 ntTSL 1 (best) BASIC22.96■■□□□ 1.27
SHISA7A6NL88 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC22.96■■□□□ 1.27
SHISA7A6NL88 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC22.96■■□□□ 1.27
SHISA7A6NL88 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC22.96■■□□□ 1.27
SHISA7A6NL88 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC22.96■■□□□ 1.27
SHISA7A6NL88 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC22.96■■□□□ 1.27
SHISA7A6NL88 MRPS7-203ENST00000579002 1638 ntTSL 2 BASIC22.96■■□□□ 1.27
SHISA7A6NL88 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
SHISA7A6NL88 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC22.95■■□□□ 1.26
SHISA7A6NL88 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC22.95■■□□□ 1.26
SHISA7A6NL88 AC133637.1-201ENST00000624115 1537 ntBASIC22.95■■□□□ 1.26
SHISA7A6NL88 ANO8-204ENST00000630631 1905 ntTSL 5 BASIC22.94■■□□□ 1.26
SHISA7A6NL88 PPM1B-202ENST00000345249 1713 ntTSL 1 (best) BASIC22.94■■□□□ 1.26
SHISA7A6NL88 UBTD1-201ENST00000370664 1706 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
SHISA7A6NL88 ENTPD5-206ENST00000556242 1437 ntTSL 5 BASIC22.94■■□□□ 1.26
SHISA7A6NL88 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
SHISA7A6NL88 KRT18P61-201ENST00000585825 1298 ntBASIC22.94■■□□□ 1.26
SHISA7A6NL88 AL499627.2-201ENST00000606283 725 ntBASIC22.94■■□□□ 1.26
SHISA7A6NL88 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC22.94■■□□□ 1.26
SHISA7A6NL88 FBXW5-201ENST00000325285 2274 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
SHISA7A6NL88 ACSS1-202ENST00000376726 2244 ntTSL 2 BASIC22.94■■□□□ 1.26
SHISA7A6NL88 DYRK2-203ENST00000393555 2209 ntAPPRIS ALT1 TSL 1 (best) BASIC22.94■■□□□ 1.26
SHISA7A6NL88 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC22.94■■□□□ 1.26
SHISA7A6NL88 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC22.93■■□□□ 1.26
SHISA7A6NL88 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC22.93■■□□□ 1.26
SHISA7A6NL88 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC22.93■■□□□ 1.26
SHISA7A6NL88 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC22.93■■□□□ 1.26
SHISA7A6NL88 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
SHISA7A6NL88 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC22.93■■□□□ 1.26
SHISA7A6NL88 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC22.93■■□□□ 1.26
SHISA7A6NL88 SYNGR3-201ENST00000248121 2051 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
SHISA7A6NL88 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC22.92■■□□□ 1.26
SHISA7A6NL88 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC22.92■■□□□ 1.26
SHISA7A6NL88 FAM124A-201ENST00000280057 2104 ntTSL 2 BASIC22.92■■□□□ 1.26
SHISA7A6NL88 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC22.92■■□□□ 1.26
SHISA7A6NL88 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC22.92■■□□□ 1.26
SHISA7A6NL88 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC22.92■■□□□ 1.26
SHISA7A6NL88 GXYLT1P2-201ENST00000433312 1230 ntBASIC22.92■■□□□ 1.26
SHISA7A6NL88 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC22.92■■□□□ 1.26
SHISA7A6NL88 NPDC1-201ENST00000371600 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC22.91■■□□□ 1.26
SHISA7A6NL88 SLC9A3R2-201ENST00000424542 2194 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
SHISA7A6NL88 ARSB-206ENST00000565165 1772 ntTSL 1 (best) BASIC22.91■■□□□ 1.26
SHISA7A6NL88 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC22.91■■□□□ 1.26
SHISA7A6NL88 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC22.91■■□□□ 1.26
SHISA7A6NL88 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC22.91■■□□□ 1.26
SHISA7A6NL88 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC22.91■■□□□ 1.26
SHISA7A6NL88 AC091060.1-201ENST00000623524 1766 ntBASIC22.91■■□□□ 1.26
SHISA7A6NL88 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC22.91■■□□□ 1.26
SHISA7A6NL88 ARHGEF7-206ENST00000375741 5525 ntTSL 1 (best) BASIC22.91■■□□□ 1.26
SHISA7A6NL88 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC22.9■■□□□ 1.26
SHISA7A6NL88 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC22.9■■□□□ 1.26
SHISA7A6NL88 RPUSD1-201ENST00000007264 2050 ntAPPRIS P1 TSL 2 BASIC22.9■■□□□ 1.26
SHISA7A6NL88 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
SHISA7A6NL88 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC22.9■■□□□ 1.26
SHISA7A6NL88 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
SHISA7A6NL88 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC22.9■■□□□ 1.26
SHISA7A6NL88 RFWD2-201ENST00000308769 2124 ntTSL 1 (best) BASIC22.9■■□□□ 1.26
Retrieved 100 of 98,524 protein–RNA pairs in 17.7 ms