Protein–RNA interactions for Protein: A6NER0

TBC1D3F, TBC1 domain family member 3F, humanhuman

Predicted RBP Predictions only

Length 549 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TBC1D3FA6NER0 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC22.48■■□□□ 1.19
TBC1D3FA6NER0 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
TBC1D3FA6NER0 GNPTG-201ENST00000204679 1983 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
TBC1D3FA6NER0 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC22.48■■□□□ 1.19
TBC1D3FA6NER0 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC22.48■■□□□ 1.19
TBC1D3FA6NER0 DAZAP1-205ENST00000587079 2086 ntAPPRIS ALT1 TSL 5 BASIC22.48■■□□□ 1.19
TBC1D3FA6NER0 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
TBC1D3FA6NER0 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
TBC1D3FA6NER0 GTSE1-AS1-202ENST00000623117 1518 ntBASIC22.47■■□□□ 1.19
TBC1D3FA6NER0 PABPN1-202ENST00000397276 2768 ntAPPRIS ALT1 TSL 1 (best) BASIC22.47■■□□□ 1.19
TBC1D3FA6NER0 B3GNT4-201ENST00000324189 1642 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
TBC1D3FA6NER0 ADPRHL2-201ENST00000373178 1668 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
TBC1D3FA6NER0 PKDCC-201ENST00000294964 2502 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
TBC1D3FA6NER0 BX842568.3-201ENST00000418104 571 ntBASIC22.47■■□□□ 1.19
TBC1D3FA6NER0 AC026271.2-201ENST00000428091 497 ntBASIC22.47■■□□□ 1.19
TBC1D3FA6NER0 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
TBC1D3FA6NER0 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
TBC1D3FA6NER0 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC22.47■■□□□ 1.19
TBC1D3FA6NER0 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
TBC1D3FA6NER0 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
TBC1D3FA6NER0 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
TBC1D3FA6NER0 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
TBC1D3FA6NER0 ASB1-202ENST00000409297 878 ntTSL 5 BASIC22.46■■□□□ 1.19
TBC1D3FA6NER0 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
TBC1D3FA6NER0 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC22.46■■□□□ 1.19
TBC1D3FA6NER0 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC22.46■■□□□ 1.19
TBC1D3FA6NER0 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC22.45■■□□□ 1.19
TBC1D3FA6NER0 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC22.45■■□□□ 1.19
TBC1D3FA6NER0 ZNF205-202ENST00000382192 2062 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
TBC1D3FA6NER0 PICALM-224ENST00000630913 2261 ntTSL 5 BASIC22.45■■□□□ 1.18
TBC1D3FA6NER0 IRS3P-201ENST00000223076 1006 ntBASIC22.45■■□□□ 1.18
TBC1D3FA6NER0 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC22.45■■□□□ 1.18
TBC1D3FA6NER0 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC22.45■■□□□ 1.18
TBC1D3FA6NER0 HHEX-201ENST00000282728 1727 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
TBC1D3FA6NER0 EED-207ENST00000528180 1745 ntTSL 5 BASIC22.45■■□□□ 1.18
TBC1D3FA6NER0 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
TBC1D3FA6NER0 FKBP8-209ENST00000597960 1781 ntAPPRIS P3 TSL 5 BASIC22.45■■□□□ 1.18
TBC1D3FA6NER0 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
TBC1D3FA6NER0 TSEN34-201ENST00000302937 2294 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
TBC1D3FA6NER0 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC22.44■■□□□ 1.18
TBC1D3FA6NER0 CDK9-201ENST00000373264 2463 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
TBC1D3FA6NER0 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
TBC1D3FA6NER0 GRAMD4P2-201ENST00000423297 1097 ntBASIC22.44■■□□□ 1.18
TBC1D3FA6NER0 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
TBC1D3FA6NER0 HSF1-204ENST00000528838 2142 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
TBC1D3FA6NER0 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC22.44■■□□□ 1.18
TBC1D3FA6NER0 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC22.44■■□□□ 1.18
TBC1D3FA6NER0 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
TBC1D3FA6NER0 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
TBC1D3FA6NER0 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC22.44■■□□□ 1.18
TBC1D3FA6NER0 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC22.44■■□□□ 1.18
TBC1D3FA6NER0 REXO4-202ENST00000371942 2360 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
TBC1D3FA6NER0 EI24-213ENST00000618552 1747 ntTSL 5 BASIC22.43■■□□□ 1.18
TBC1D3FA6NER0 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC22.43■■□□□ 1.18
TBC1D3FA6NER0 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
TBC1D3FA6NER0 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC22.43■■□□□ 1.18
TBC1D3FA6NER0 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
TBC1D3FA6NER0 SRR-201ENST00000344595 2728 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
TBC1D3FA6NER0 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC22.42■■□□□ 1.18
TBC1D3FA6NER0 RIMKLB-205ENST00000535829 2236 ntAPPRIS P1 TSL 2 BASIC22.42■■□□□ 1.18
TBC1D3FA6NER0 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC22.42■■□□□ 1.18
TBC1D3FA6NER0 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC22.42■■□□□ 1.18
TBC1D3FA6NER0 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
TBC1D3FA6NER0 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC22.42■■□□□ 1.18
TBC1D3FA6NER0 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC22.42■■□□□ 1.18
TBC1D3FA6NER0 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC22.42■■□□□ 1.18
TBC1D3FA6NER0 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC22.42■■□□□ 1.18
TBC1D3FA6NER0 AC126544.1-201ENST00000580842 1059 ntBASIC22.42■■□□□ 1.18
TBC1D3FA6NER0 MIR5787-201ENST00000611784 55 ntBASIC22.42■■□□□ 1.18
TBC1D3FA6NER0 MPST-208ENST00000628507 698 ntTSL 5 BASIC22.42■■□□□ 1.18
TBC1D3FA6NER0 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
TBC1D3FA6NER0 RILP-201ENST00000301336 1771 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
TBC1D3FA6NER0 AMIGO1-201ENST00000369862 2229 ntAPPRIS P1 TSL 5 BASIC22.42■■□□□ 1.18
TBC1D3FA6NER0 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
TBC1D3FA6NER0 TMED2-201ENST00000262225 2560 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
TBC1D3FA6NER0 SH3GL1-201ENST00000269886 2516 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
TBC1D3FA6NER0 CBARP-202ENST00000382477 2453 ntAPPRIS ALT2 TSL 5 BASIC22.41■■□□□ 1.18
TBC1D3FA6NER0 PLD4-201ENST00000392593 6515 ntAPPRIS P3 TSL 1 (best) BASIC22.41■■□□□ 1.18
TBC1D3FA6NER0 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
TBC1D3FA6NER0 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC22.41■■□□□ 1.18
TBC1D3FA6NER0 RHOF-204ENST00000537265 699 ntTSL 2 BASIC22.41■■□□□ 1.18
TBC1D3FA6NER0 AC113189.4-201ENST00000575331 5553 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
TBC1D3FA6NER0 TXNRD2-201ENST00000334363 1893 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
TBC1D3FA6NER0 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC22.4■■□□□ 1.18
TBC1D3FA6NER0 C16orf72-201ENST00000327827 5953 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
TBC1D3FA6NER0 SNX3-202ENST00000349379 890 ntTSL 2 BASIC22.4■■□□□ 1.18
TBC1D3FA6NER0 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC22.4■■□□□ 1.18
TBC1D3FA6NER0 MSX2-201ENST00000239243 2241 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
TBC1D3FA6NER0 CYP4V2-201ENST00000378802 2042 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
TBC1D3FA6NER0 ATMIN-201ENST00000299575 4884 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
TBC1D3FA6NER0 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC22.39■■□□□ 1.18
TBC1D3FA6NER0 IL17RE-203ENST00000421412 2158 ntAPPRIS ALT2 TSL 1 (best) BASIC22.39■■□□□ 1.18
TBC1D3FA6NER0 KCNMA1-283ENST00000640523 5425 ntAPPRIS ALT2 TSL 5 BASIC22.39■■□□□ 1.18
TBC1D3FA6NER0 B3GAT3-201ENST00000265471 1641 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.18
TBC1D3FA6NER0 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC22.39■■□□□ 1.17
TBC1D3FA6NER0 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC22.39■■□□□ 1.17
TBC1D3FA6NER0 ZNF444-211ENST00000592949 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC22.39■■□□□ 1.17
TBC1D3FA6NER0 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC22.39■■□□□ 1.17
TBC1D3FA6NER0 TTLL1-201ENST00000266254 1645 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
TBC1D3FA6NER0 GJD4-201ENST00000321660 1580 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
Retrieved 100 of 98,524 protein–RNA pairs in 26.2 ms