Protein–RNA interactions for Protein: A0A0B4J273

TRAV34, T-cell receptor alpha variable 34 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV34A0A0B4J273 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC17.31■□□□□ 0.36
TRAV34A0A0B4J273 EI24-213ENST00000618552 1747 ntTSL 5 BASIC17.31■□□□□ 0.36
TRAV34A0A0B4J273 AC092296.2-201ENST00000589470 999 ntBASIC17.31■□□□□ 0.36
TRAV34A0A0B4J273 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
TRAV34A0A0B4J273 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
TRAV34A0A0B4J273 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
TRAV34A0A0B4J273 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
TRAV34A0A0B4J273 MSRB1-206ENST00000622125 1363 ntAPPRIS ALT1 TSL 5 BASIC17.3■□□□□ 0.36
TRAV34A0A0B4J273 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
TRAV34A0A0B4J273 AC007375.3-201ENST00000600936 2314 ntBASIC17.3■□□□□ 0.36
TRAV34A0A0B4J273 TMEM260-202ENST00000538838 1638 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
TRAV34A0A0B4J273 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
TRAV34A0A0B4J273 BANF1-208ENST00000533166 1135 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
TRAV34A0A0B4J273 C16orf95-205ENST00000567970 1031 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
TRAV34A0A0B4J273 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
TRAV34A0A0B4J273 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
TRAV34A0A0B4J273 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
TRAV34A0A0B4J273 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
TRAV34A0A0B4J273 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC17.3■□□□□ 0.36
TRAV34A0A0B4J273 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
TRAV34A0A0B4J273 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
TRAV34A0A0B4J273 CTSZ-201ENST00000217131 1495 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
TRAV34A0A0B4J273 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC17.29■□□□□ 0.36
TRAV34A0A0B4J273 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
TRAV34A0A0B4J273 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
TRAV34A0A0B4J273 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC17.29■□□□□ 0.36
TRAV34A0A0B4J273 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
TRAV34A0A0B4J273 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC17.29■□□□□ 0.36
TRAV34A0A0B4J273 AC127496.7-201ENST00000625110 1798 ntBASIC17.29■□□□□ 0.36
TRAV34A0A0B4J273 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
TRAV34A0A0B4J273 COMT-203ENST00000403184 2217 ntTSL 2 BASIC17.29■□□□□ 0.36
TRAV34A0A0B4J273 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
TRAV34A0A0B4J273 ECEL1P1-201ENST00000373592 1742 ntBASIC17.29■□□□□ 0.36
TRAV34A0A0B4J273 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC17.29■□□□□ 0.36
TRAV34A0A0B4J273 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
TRAV34A0A0B4J273 ZNF263-204ENST00000573578 1636 ntTSL 5 BASIC17.29■□□□□ 0.36
TRAV34A0A0B4J273 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
TRAV34A0A0B4J273 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
TRAV34A0A0B4J273 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
TRAV34A0A0B4J273 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC17.28■□□□□ 0.36
TRAV34A0A0B4J273 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
TRAV34A0A0B4J273 ARL6IP4-211ENST00000454885 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
TRAV34A0A0B4J273 ZFAND2B-206ENST00000409336 944 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
TRAV34A0A0B4J273 AC008105.2-203ENST00000591361 550 ntTSL 4 BASIC17.28■□□□□ 0.36
TRAV34A0A0B4J273 ZFAND2B-221ENST00000621130 1070 ntTSL 5 BASIC17.28■□□□□ 0.36
TRAV34A0A0B4J273 FOXO6-202ENST00000641094 1476 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
TRAV34A0A0B4J273 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
TRAV34A0A0B4J273 SLIT1-203ENST00000371041 1695 ntTSL 2 BASIC17.28■□□□□ 0.36
TRAV34A0A0B4J273 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
TRAV34A0A0B4J273 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
TRAV34A0A0B4J273 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
TRAV34A0A0B4J273 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
TRAV34A0A0B4J273 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
TRAV34A0A0B4J273 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
TRAV34A0A0B4J273 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
TRAV34A0A0B4J273 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
TRAV34A0A0B4J273 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC17.28■□□□□ 0.36
TRAV34A0A0B4J273 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
TRAV34A0A0B4J273 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
TRAV34A0A0B4J273 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
TRAV34A0A0B4J273 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
TRAV34A0A0B4J273 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
TRAV34A0A0B4J273 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
TRAV34A0A0B4J273 HNRNPD-203ENST00000353341 1585 ntAPPRIS ALT1 TSL 1 (best) BASIC17.27■□□□□ 0.35
TRAV34A0A0B4J273 KRT18-201ENST00000388835 1562 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
TRAV34A0A0B4J273 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC17.27■□□□□ 0.35
TRAV34A0A0B4J273 H19-210ENST00000439725 1929 ntTSL 2 BASIC17.27■□□□□ 0.35
TRAV34A0A0B4J273 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC17.27■□□□□ 0.35
TRAV34A0A0B4J273 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
TRAV34A0A0B4J273 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
TRAV34A0A0B4J273 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
TRAV34A0A0B4J273 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
TRAV34A0A0B4J273 ARL4D-201ENST00000320033 1612 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
TRAV34A0A0B4J273 CENPVL1-201ENST00000602548 1620 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
TRAV34A0A0B4J273 CENPVL2-201ENST00000634648 1620 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
TRAV34A0A0B4J273 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
TRAV34A0A0B4J273 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
TRAV34A0A0B4J273 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
TRAV34A0A0B4J273 AC137767.1-201ENST00000602918 1920 ntBASIC17.26■□□□□ 0.35
TRAV34A0A0B4J273 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
TRAV34A0A0B4J273 MACF1-219ENST00000484793 834 ntTSL 2 BASIC17.26■□□□□ 0.35
TRAV34A0A0B4J273 C16orf52-207ENST00000569656 1257 ntTSL 5 BASIC17.26■□□□□ 0.35
TRAV34A0A0B4J273 AC013394.1-201ENST00000629685 808 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
TRAV34A0A0B4J273 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
TRAV34A0A0B4J273 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
TRAV34A0A0B4J273 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
TRAV34A0A0B4J273 NR6A1-201ENST00000344523 1846 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
TRAV34A0A0B4J273 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
TRAV34A0A0B4J273 PDSS1-201ENST00000376215 1626 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
TRAV34A0A0B4J273 WBP1-202ENST00000393972 1325 ntTSL 2 BASIC17.25■□□□□ 0.35
TRAV34A0A0B4J273 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
TRAV34A0A0B4J273 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
TRAV34A0A0B4J273 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC17.25■□□□□ 0.35
TRAV34A0A0B4J273 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC17.25■□□□□ 0.35
TRAV34A0A0B4J273 PARD6A-201ENST00000219255 1248 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
TRAV34A0A0B4J273 KRT18P10-201ENST00000388836 1287 ntBASIC17.25■□□□□ 0.35
TRAV34A0A0B4J273 ECEL1P2-201ENST00000461596 1295 ntBASIC17.25■□□□□ 0.35
TRAV34A0A0B4J273 U2AF2-206ENST00000590551 1104 ntTSL 3 BASIC17.25■□□□□ 0.35
TRAV34A0A0B4J273 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC17.25■□□□□ 0.35
TRAV34A0A0B4J273 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 24.5 ms