Protein–RNA interactions for Protein: A0A0B4J249

TRAV5, T-cell receptor alpha variable 5 (Fragment), humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV5A0A0B4J249 IDNK-203ENST00000405990 629 ntTSL 2 BASIC17.45■□□□□ 0.38
TRAV5A0A0B4J249 TTLL1-201ENST00000266254 1645 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
TRAV5A0A0B4J249 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
TRAV5A0A0B4J249 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
TRAV5A0A0B4J249 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC17.45■□□□□ 0.38
TRAV5A0A0B4J249 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC17.45■□□□□ 0.38
TRAV5A0A0B4J249 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC17.45■□□□□ 0.38
TRAV5A0A0B4J249 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
TRAV5A0A0B4J249 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
TRAV5A0A0B4J249 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
TRAV5A0A0B4J249 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
TRAV5A0A0B4J249 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
TRAV5A0A0B4J249 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
TRAV5A0A0B4J249 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
TRAV5A0A0B4J249 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
TRAV5A0A0B4J249 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
TRAV5A0A0B4J249 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
TRAV5A0A0B4J249 MIR6765-201ENST00000614092 87 ntBASIC17.44■□□□□ 0.38
TRAV5A0A0B4J249 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
TRAV5A0A0B4J249 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
TRAV5A0A0B4J249 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC17.44■□□□□ 0.38
TRAV5A0A0B4J249 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
TRAV5A0A0B4J249 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC17.44■□□□□ 0.38
TRAV5A0A0B4J249 CRACR2B-202ENST00000525077 1578 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
TRAV5A0A0B4J249 ADORA2B-201ENST00000304222 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
TRAV5A0A0B4J249 NFU1-203ENST00000410022 1467 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
TRAV5A0A0B4J249 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
TRAV5A0A0B4J249 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC17.43■□□□□ 0.38
TRAV5A0A0B4J249 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
TRAV5A0A0B4J249 AC127496.7-201ENST00000625110 1798 ntBASIC17.43■□□□□ 0.38
TRAV5A0A0B4J249 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
TRAV5A0A0B4J249 EFS-203ENST00000429593 2610 ntTSL 2 BASIC17.43■□□□□ 0.38
TRAV5A0A0B4J249 PKD1P6-201ENST00000343738 4769 ntBASIC17.43■□□□□ 0.38
TRAV5A0A0B4J249 MPC1-201ENST00000341756 976 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
TRAV5A0A0B4J249 DUX4L9-201ENST00000449051 1259 ntBASIC17.43■□□□□ 0.38
TRAV5A0A0B4J249 HERC2P9-201ENST00000507787 1023 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
TRAV5A0A0B4J249 CLDND1-226ENST00000513287 999 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
TRAV5A0A0B4J249 MPC1-206ENST00000621630 977 ntAPPRIS ALT1 TSL 5 BASIC17.43■□□□□ 0.38
TRAV5A0A0B4J249 MPC1-207ENST00000621685 1192 ntTSL 5 BASIC17.43■□□□□ 0.38
TRAV5A0A0B4J249 MOB4-204ENST00000409360 1447 ntTSL 5 BASIC17.43■□□□□ 0.38
TRAV5A0A0B4J249 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
TRAV5A0A0B4J249 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
TRAV5A0A0B4J249 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
TRAV5A0A0B4J249 RNF126P1-201ENST00000567452 1320 ntBASIC17.43■□□□□ 0.38
TRAV5A0A0B4J249 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
TRAV5A0A0B4J249 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC17.43■□□□□ 0.38
TRAV5A0A0B4J249 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC17.42■□□□□ 0.38
TRAV5A0A0B4J249 GCA-201ENST00000233612 1694 ntTSL 2 BASIC17.42■□□□□ 0.38
TRAV5A0A0B4J249 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
TRAV5A0A0B4J249 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
TRAV5A0A0B4J249 AC107214.1-201ENST00000457303 559 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
TRAV5A0A0B4J249 LMAN2-208ENST00000515209 1149 ntAPPRIS ALT2 TSL 3 BASIC17.42■□□□□ 0.38
TRAV5A0A0B4J249 MBP-237ENST00000579129 1052 ntTSL 5 BASIC17.42■□□□□ 0.38
TRAV5A0A0B4J249 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
TRAV5A0A0B4J249 MADCAM1-202ENST00000346144 1309 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
TRAV5A0A0B4J249 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
TRAV5A0A0B4J249 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC17.42■□□□□ 0.38
TRAV5A0A0B4J249 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
TRAV5A0A0B4J249 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
TRAV5A0A0B4J249 LONRF2P2-201ENST00000439212 571 ntBASIC17.41■□□□□ 0.38
TRAV5A0A0B4J249 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
TRAV5A0A0B4J249 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
TRAV5A0A0B4J249 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
TRAV5A0A0B4J249 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
TRAV5A0A0B4J249 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
TRAV5A0A0B4J249 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC17.41■□□□□ 0.38
TRAV5A0A0B4J249 HYI-213ENST00000583037 1322 ntTSL 5 BASIC17.41■□□□□ 0.38
TRAV5A0A0B4J249 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
TRAV5A0A0B4J249 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
TRAV5A0A0B4J249 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
TRAV5A0A0B4J249 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
TRAV5A0A0B4J249 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
TRAV5A0A0B4J249 AC007375.3-201ENST00000600936 2314 ntBASIC17.4■□□□□ 0.38
TRAV5A0A0B4J249 RPS2-201ENST00000343262 985 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
TRAV5A0A0B4J249 FP236240.1-201ENST00000619537 1116 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
TRAV5A0A0B4J249 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
TRAV5A0A0B4J249 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
TRAV5A0A0B4J249 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC17.4■□□□□ 0.38
TRAV5A0A0B4J249 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
TRAV5A0A0B4J249 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
TRAV5A0A0B4J249 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
TRAV5A0A0B4J249 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
TRAV5A0A0B4J249 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
TRAV5A0A0B4J249 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC17.4■□□□□ 0.38
TRAV5A0A0B4J249 GJD4-201ENST00000321660 1580 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
TRAV5A0A0B4J249 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC17.4■□□□□ 0.38
TRAV5A0A0B4J249 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
TRAV5A0A0B4J249 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
TRAV5A0A0B4J249 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
TRAV5A0A0B4J249 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC17.39■□□□□ 0.38
TRAV5A0A0B4J249 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.38
TRAV5A0A0B4J249 MYB-221ENST00000527615 2381 ntTSL 5 BASIC17.39■□□□□ 0.38
TRAV5A0A0B4J249 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
TRAV5A0A0B4J249 AC068134.2-201ENST00000437095 576 ntTSL 3 BASIC17.39■□□□□ 0.37
TRAV5A0A0B4J249 STK32C-205ENST00000456004 607 ntTSL 2 BASIC17.39■□□□□ 0.37
TRAV5A0A0B4J249 ABHD17AP3-201ENST00000503096 1137 ntBASIC17.39■□□□□ 0.37
TRAV5A0A0B4J249 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
TRAV5A0A0B4J249 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
TRAV5A0A0B4J249 RAD51-210ENST00000557850 1397 ntTSL 2 BASIC17.39■□□□□ 0.37
TRAV5A0A0B4J249 AC137767.1-201ENST00000602918 1920 ntBASIC17.39■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 17.8 ms