Protein–RNA interactions for Protein: A0A0B4J1U4

TRGV5, T-cell receptor gamma variable 5 (Fragment), humanhuman

Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRGV5A0A0B4J1U4 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC20.26■□□□□ 0.83
TRGV5A0A0B4J1U4 ZNF205-201ENST00000219091 1947 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
TRGV5A0A0B4J1U4 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
TRGV5A0A0B4J1U4 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
TRGV5A0A0B4J1U4 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
TRGV5A0A0B4J1U4 ASB1-202ENST00000409297 878 ntTSL 5 BASIC20.26■□□□□ 0.83
TRGV5A0A0B4J1U4 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
TRGV5A0A0B4J1U4 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
TRGV5A0A0B4J1U4 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC20.26■□□□□ 0.83
TRGV5A0A0B4J1U4 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
TRGV5A0A0B4J1U4 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC20.26■□□□□ 0.83
TRGV5A0A0B4J1U4 MAG-206ENST00000597035 542 ntTSL 4 BASIC20.26■□□□□ 0.83
TRGV5A0A0B4J1U4 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
TRGV5A0A0B4J1U4 TTLL1-201ENST00000266254 1645 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
TRGV5A0A0B4J1U4 SLC22A31-206ENST00000614943 1860 ntTSL 5 BASIC20.26■□□□□ 0.83
TRGV5A0A0B4J1U4 CBARP-202ENST00000382477 2453 ntAPPRIS ALT2 TSL 5 BASIC20.26■□□□□ 0.83
TRGV5A0A0B4J1U4 PGF-203ENST00000553716 1699 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
TRGV5A0A0B4J1U4 PON2-218ENST00000633531 1653 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
TRGV5A0A0B4J1U4 GJD4-201ENST00000321660 1580 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
TRGV5A0A0B4J1U4 PICALM-224ENST00000630913 2261 ntTSL 5 BASIC20.25■□□□□ 0.83
TRGV5A0A0B4J1U4 LINC00543-201ENST00000567234 1845 ntBASIC20.25■□□□□ 0.83
TRGV5A0A0B4J1U4 B3GAT3-201ENST00000265471 1641 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
TRGV5A0A0B4J1U4 PYCR1-202ENST00000337943 1890 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
TRGV5A0A0B4J1U4 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
TRGV5A0A0B4J1U4 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC20.25■□□□□ 0.83
TRGV5A0A0B4J1U4 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC20.25■□□□□ 0.83
TRGV5A0A0B4J1U4 LGR4-203ENST00000480977 492 ntTSL 2 BASIC20.25■□□□□ 0.83
TRGV5A0A0B4J1U4 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC20.25■□□□□ 0.83
TRGV5A0A0B4J1U4 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
TRGV5A0A0B4J1U4 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC20.25■□□□□ 0.83
TRGV5A0A0B4J1U4 CA15P2-201ENST00000611168 834 ntBASIC20.25■□□□□ 0.83
TRGV5A0A0B4J1U4 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC20.25■□□□□ 0.83
TRGV5A0A0B4J1U4 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
TRGV5A0A0B4J1U4 RARA-204ENST00000394089 2024 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
TRGV5A0A0B4J1U4 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
TRGV5A0A0B4J1U4 GTSE1-AS1-202ENST00000623117 1518 ntBASIC20.24■□□□□ 0.83
TRGV5A0A0B4J1U4 KCTD5-201ENST00000301738 2482 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
TRGV5A0A0B4J1U4 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
TRGV5A0A0B4J1U4 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC20.24■□□□□ 0.83
TRGV5A0A0B4J1U4 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
TRGV5A0A0B4J1U4 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
TRGV5A0A0B4J1U4 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
TRGV5A0A0B4J1U4 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
TRGV5A0A0B4J1U4 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC20.23■□□□□ 0.83
TRGV5A0A0B4J1U4 AC099791.1-201ENST00000416440 715 ntBASIC20.23■□□□□ 0.83
TRGV5A0A0B4J1U4 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC20.23■□□□□ 0.83
TRGV5A0A0B4J1U4 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
TRGV5A0A0B4J1U4 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
TRGV5A0A0B4J1U4 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC20.23■□□□□ 0.83
TRGV5A0A0B4J1U4 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
TRGV5A0A0B4J1U4 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC20.23■□□□□ 0.83
TRGV5A0A0B4J1U4 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC20.23■□□□□ 0.83
TRGV5A0A0B4J1U4 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
TRGV5A0A0B4J1U4 TBL2-222ENST00000610724 2165 ntTSL 5 BASIC20.22■□□□□ 0.83
TRGV5A0A0B4J1U4 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC20.22■□□□□ 0.83
TRGV5A0A0B4J1U4 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC20.22■□□□□ 0.83
TRGV5A0A0B4J1U4 SHD-204ENST00000599689 1729 ntTSL 5 BASIC20.22■□□□□ 0.83
TRGV5A0A0B4J1U4 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
TRGV5A0A0B4J1U4 KRT10-201ENST00000269576 2124 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
TRGV5A0A0B4J1U4 BX842568.3-201ENST00000418104 571 ntBASIC20.22■□□□□ 0.83
TRGV5A0A0B4J1U4 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC20.22■□□□□ 0.83
TRGV5A0A0B4J1U4 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC20.22■□□□□ 0.83
TRGV5A0A0B4J1U4 ST6GALNAC2-201ENST00000225276 2170 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
TRGV5A0A0B4J1U4 ALDH16A1-203ENST00000540132 2174 ntTSL 2 BASIC20.22■□□□□ 0.83
TRGV5A0A0B4J1U4 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
TRGV5A0A0B4J1U4 PMS1-205ENST00000409985 1882 ntTSL 2 BASIC20.22■□□□□ 0.83
TRGV5A0A0B4J1U4 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC20.22■□□□□ 0.83
TRGV5A0A0B4J1U4 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC20.22■□□□□ 0.83
TRGV5A0A0B4J1U4 FP325331.1-202ENST00000623531 1380 ntBASIC20.21■□□□□ 0.83
TRGV5A0A0B4J1U4 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
TRGV5A0A0B4J1U4 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC20.21■□□□□ 0.83
TRGV5A0A0B4J1U4 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
TRGV5A0A0B4J1U4 GJC1-209ENST00000592524 1837 ntAPPRIS P1 TSL 2 BASIC20.21■□□□□ 0.83
TRGV5A0A0B4J1U4 STOX2-205ENST00000513034 807 ntTSL 3 BASIC20.21■□□□□ 0.83
TRGV5A0A0B4J1U4 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC20.21■□□□□ 0.83
TRGV5A0A0B4J1U4 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC20.21■□□□□ 0.83
TRGV5A0A0B4J1U4 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC20.21■□□□□ 0.83
TRGV5A0A0B4J1U4 AC233992.3-201ENST00000607491 485 ntBASIC20.21■□□□□ 0.83
TRGV5A0A0B4J1U4 AL139125.2-201ENST00000623134 1869 ntBASIC20.21■□□□□ 0.83
TRGV5A0A0B4J1U4 TBC1D10A-201ENST00000215790 2077 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
TRGV5A0A0B4J1U4 SLC30A3-201ENST00000233535 2260 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
TRGV5A0A0B4J1U4 MORF4L1-202ENST00000379535 2274 ntTSL 2 BASIC20.21■□□□□ 0.83
TRGV5A0A0B4J1U4 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC20.21■□□□□ 0.83
TRGV5A0A0B4J1U4 NUDT18-202ENST00000613958 1754 ntTSL 2 BASIC20.21■□□□□ 0.83
TRGV5A0A0B4J1U4 NAGLU-201ENST00000225927 2544 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
TRGV5A0A0B4J1U4 PLEKHA8-202ENST00000396257 1907 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
TRGV5A0A0B4J1U4 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC20.2■□□□□ 0.82
TRGV5A0A0B4J1U4 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC20.2■□□□□ 0.82
TRGV5A0A0B4J1U4 ATMIN-201ENST00000299575 4884 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
TRGV5A0A0B4J1U4 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC20.2■□□□□ 0.82
TRGV5A0A0B4J1U4 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC20.19■□□□□ 0.82
TRGV5A0A0B4J1U4 MAGI2-217ENST00000629359 6704 ntTSL 5 BASIC20.19■□□□□ 0.82
TRGV5A0A0B4J1U4 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
TRGV5A0A0B4J1U4 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
TRGV5A0A0B4J1U4 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC20.19■□□□□ 0.82
TRGV5A0A0B4J1U4 RBM38-205ENST00000440234 686 ntTSL 2 BASIC20.19■□□□□ 0.82
TRGV5A0A0B4J1U4 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC20.19■□□□□ 0.82
TRGV5A0A0B4J1U4 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
TRGV5A0A0B4J1U4 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC20.19■□□□□ 0.82
TRGV5A0A0B4J1U4 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC20.19■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 24.7 ms