Protein–RNA interactions for Protein: A0A0A6YYK4

TRBV7-1, T-cell receptor beta variable 7-1 (non-functional) (Fragment), humanhuman

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV7-1A0A0A6YYK4 MIR6724-1-201ENST00000616420 92 ntBASIC17.46■□□□□ 0.39
TRBV7-1A0A0A6YYK4 MIR6724-2-201ENST00000616483 92 ntBASIC17.46■□□□□ 0.39
TRBV7-1A0A0A6YYK4 MIR6724-4-201ENST00000617390 92 ntBASIC17.46■□□□□ 0.39
TRBV7-1A0A0A6YYK4 MIR6724-3-201ENST00000622482 92 ntBASIC17.46■□□□□ 0.39
TRBV7-1A0A0A6YYK4 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC17.46■□□□□ 0.39
TRBV7-1A0A0A6YYK4 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC17.46■□□□□ 0.38
TRBV7-1A0A0A6YYK4 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
TRBV7-1A0A0A6YYK4 ERF-201ENST00000222329 2698 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
TRBV7-1A0A0A6YYK4 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
TRBV7-1A0A0A6YYK4 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
TRBV7-1A0A0A6YYK4 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
TRBV7-1A0A0A6YYK4 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC17.45■□□□□ 0.38
TRBV7-1A0A0A6YYK4 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
TRBV7-1A0A0A6YYK4 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
TRBV7-1A0A0A6YYK4 IGFBP3-202ENST00000381083 1050 ntAPPRIS ALT1 TSL 5 BASIC17.45■□□□□ 0.38
TRBV7-1A0A0A6YYK4 KRT16P3-201ENST00000439127 1283 ntBASIC17.45■□□□□ 0.38
TRBV7-1A0A0A6YYK4 UNC93B8-201ENST00000511903 705 ntBASIC17.45■□□□□ 0.38
TRBV7-1A0A0A6YYK4 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC17.45■□□□□ 0.38
TRBV7-1A0A0A6YYK4 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC17.45■□□□□ 0.38
TRBV7-1A0A0A6YYK4 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
TRBV7-1A0A0A6YYK4 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
TRBV7-1A0A0A6YYK4 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC17.45■□□□□ 0.38
TRBV7-1A0A0A6YYK4 H19-210ENST00000439725 1929 ntTSL 2 BASIC17.45■□□□□ 0.38
TRBV7-1A0A0A6YYK4 ANKRD54-201ENST00000215941 2184 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
TRBV7-1A0A0A6YYK4 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC17.45■□□□□ 0.38
TRBV7-1A0A0A6YYK4 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
TRBV7-1A0A0A6YYK4 C21orf2-202ENST00000339818 2233 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
TRBV7-1A0A0A6YYK4 CTBP1-203ENST00000382952 2467 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
TRBV7-1A0A0A6YYK4 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC17.44■□□□□ 0.38
TRBV7-1A0A0A6YYK4 ATP5G2-201ENST00000338662 1792 ntTSL 2 BASIC17.44■□□□□ 0.38
TRBV7-1A0A0A6YYK4 DUSP8P3-201ENST00000399571 1760 ntBASIC17.44■□□□□ 0.38
TRBV7-1A0A0A6YYK4 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
TRBV7-1A0A0A6YYK4 KISS1-201ENST00000367194 709 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
TRBV7-1A0A0A6YYK4 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
TRBV7-1A0A0A6YYK4 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
TRBV7-1A0A0A6YYK4 FBXW4-201ENST00000331272 2483 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
TRBV7-1A0A0A6YYK4 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
TRBV7-1A0A0A6YYK4 SLC9A3-201ENST00000264938 2584 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
TRBV7-1A0A0A6YYK4 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
TRBV7-1A0A0A6YYK4 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC17.43■□□□□ 0.38
TRBV7-1A0A0A6YYK4 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC17.43■□□□□ 0.38
TRBV7-1A0A0A6YYK4 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC17.43■□□□□ 0.38
TRBV7-1A0A0A6YYK4 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
TRBV7-1A0A0A6YYK4 AC079630.1-202ENST00000618127 1840 ntBASIC17.43■□□□□ 0.38
TRBV7-1A0A0A6YYK4 LSM4-201ENST00000252816 986 ntTSL 2 BASIC17.43■□□□□ 0.38
TRBV7-1A0A0A6YYK4 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC17.43■□□□□ 0.38
TRBV7-1A0A0A6YYK4 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
TRBV7-1A0A0A6YYK4 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC17.43■□□□□ 0.38
TRBV7-1A0A0A6YYK4 GUSBP5-201ENST00000418136 578 ntBASIC17.43■□□□□ 0.38
TRBV7-1A0A0A6YYK4 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
TRBV7-1A0A0A6YYK4 KCNS1-202ENST00000537075 2136 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
TRBV7-1A0A0A6YYK4 TIE1-210ENST00000538015 1140 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
TRBV7-1A0A0A6YYK4 ERGIC1-202ENST00000393784 2881 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
TRBV7-1A0A0A6YYK4 ATAD3A-203ENST00000378756 2492 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
TRBV7-1A0A0A6YYK4 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
TRBV7-1A0A0A6YYK4 FOXA2-201ENST00000377115 2401 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
TRBV7-1A0A0A6YYK4 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
TRBV7-1A0A0A6YYK4 CASK-201ENST00000378154 2494 ntTSL 5 BASIC17.42■□□□□ 0.38
TRBV7-1A0A0A6YYK4 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
TRBV7-1A0A0A6YYK4 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
TRBV7-1A0A0A6YYK4 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
TRBV7-1A0A0A6YYK4 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
TRBV7-1A0A0A6YYK4 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
TRBV7-1A0A0A6YYK4 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC17.42■□□□□ 0.38
TRBV7-1A0A0A6YYK4 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC17.42■□□□□ 0.38
TRBV7-1A0A0A6YYK4 AC144652.1-201ENST00000609974 1624 ntBASIC17.42■□□□□ 0.38
TRBV7-1A0A0A6YYK4 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
TRBV7-1A0A0A6YYK4 UNC50-204ENST00000409975 2172 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
TRBV7-1A0A0A6YYK4 CAPN10-208ENST00000404753 2570 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
TRBV7-1A0A0A6YYK4 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
TRBV7-1A0A0A6YYK4 ADAMTS13-203ENST00000371910 1074 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
TRBV7-1A0A0A6YYK4 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC17.41■□□□□ 0.38
TRBV7-1A0A0A6YYK4 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC17.41■□□□□ 0.38
TRBV7-1A0A0A6YYK4 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC17.41■□□□□ 0.38
TRBV7-1A0A0A6YYK4 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC17.41■□□□□ 0.38
TRBV7-1A0A0A6YYK4 AMZ2-202ENST00000359904 2402 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
TRBV7-1A0A0A6YYK4 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
TRBV7-1A0A0A6YYK4 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC17.41■□□□□ 0.38
TRBV7-1A0A0A6YYK4 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC17.41■□□□□ 0.38
TRBV7-1A0A0A6YYK4 FP325331.1-202ENST00000623531 1380 ntBASIC17.4■□□□□ 0.38
TRBV7-1A0A0A6YYK4 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
TRBV7-1A0A0A6YYK4 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
TRBV7-1A0A0A6YYK4 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
TRBV7-1A0A0A6YYK4 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC17.4■□□□□ 0.38
TRBV7-1A0A0A6YYK4 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
TRBV7-1A0A0A6YYK4 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC17.4■□□□□ 0.38
TRBV7-1A0A0A6YYK4 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC17.4■□□□□ 0.38
TRBV7-1A0A0A6YYK4 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
TRBV7-1A0A0A6YYK4 HES5-201ENST00000378453 1306 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
TRBV7-1A0A0A6YYK4 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
TRBV7-1A0A0A6YYK4 ARRDC2-202ENST00000379656 2528 ntTSL 2 BASIC17.4■□□□□ 0.38
TRBV7-1A0A0A6YYK4 CPNE2-202ENST00000535318 2316 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
TRBV7-1A0A0A6YYK4 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.38
TRBV7-1A0A0A6YYK4 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
TRBV7-1A0A0A6YYK4 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
TRBV7-1A0A0A6YYK4 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
TRBV7-1A0A0A6YYK4 ACTR1B-201ENST00000289228 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
TRBV7-1A0A0A6YYK4 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
TRBV7-1A0A0A6YYK4 ANAPC13-201ENST00000354910 1209 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
TRBV7-1A0A0A6YYK4 AC055876.1-201ENST00000430589 895 ntTSL 2 BASIC17.39■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 18.7 ms