Protein–RNA interactions for Protein: A0A0A6YY99

TNFSF12-TNFSF13, Protein TNFSF12-TNFSF13, humanhuman

Predictions only

Length 330 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF12-TNFSF13A0A0A6YY99 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
TNFSF12-TNFSF13A0A0A6YY99 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC20.47■□□□□ 0.87
TNFSF12-TNFSF13A0A0A6YY99 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC20.46■□□□□ 0.87
TNFSF12-TNFSF13A0A0A6YY99 CDYL-203ENST00000397588 2184 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
TNFSF12-TNFSF13A0A0A6YY99 KCNQ3-202ENST00000519445 2801 ntAPPRIS ALT2 TSL 5 BASIC20.46■□□□□ 0.87
TNFSF12-TNFSF13A0A0A6YY99 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC20.46■□□□□ 0.87
TNFSF12-TNFSF13A0A0A6YY99 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
TNFSF12-TNFSF13A0A0A6YY99 CRYAA-201ENST00000291554 1139 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
TNFSF12-TNFSF13A0A0A6YY99 QDPR-206ENST00000508623 601 ntTSL 3 BASIC20.46■□□□□ 0.87
TNFSF12-TNFSF13A0A0A6YY99 AL512631.2-201ENST00000604634 923 ntBASIC20.46■□□□□ 0.87
TNFSF12-TNFSF13A0A0A6YY99 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC20.46■□□□□ 0.87
TNFSF12-TNFSF13A0A0A6YY99 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC20.46■□□□□ 0.87
TNFSF12-TNFSF13A0A0A6YY99 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC20.46■□□□□ 0.87
TNFSF12-TNFSF13A0A0A6YY99 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
TNFSF12-TNFSF13A0A0A6YY99 D2HGDH-203ENST00000403782 2208 ntTSL 2 BASIC20.46■□□□□ 0.87
TNFSF12-TNFSF13A0A0A6YY99 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
TNFSF12-TNFSF13A0A0A6YY99 CLEC14A-201ENST00000342213 2267 ntAPPRIS P1 BASIC20.46■□□□□ 0.87
TNFSF12-TNFSF13A0A0A6YY99 ADGRA2-202ENST00000412232 5651 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
TNFSF12-TNFSF13A0A0A6YY99 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC20.45■□□□□ 0.86
TNFSF12-TNFSF13A0A0A6YY99 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC20.45■□□□□ 0.86
TNFSF12-TNFSF13A0A0A6YY99 ARMC10-204ENST00000425331 2443 ntTSL 2 BASIC20.45■□□□□ 0.86
TNFSF12-TNFSF13A0A0A6YY99 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC20.45■□□□□ 0.86
TNFSF12-TNFSF13A0A0A6YY99 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
TNFSF12-TNFSF13A0A0A6YY99 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
TNFSF12-TNFSF13A0A0A6YY99 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC20.45■□□□□ 0.86
TNFSF12-TNFSF13A0A0A6YY99 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC20.45■□□□□ 0.86
TNFSF12-TNFSF13A0A0A6YY99 RASSF1-AS1-201ENST00000629828 790 ntBASIC20.45■□□□□ 0.86
TNFSF12-TNFSF13A0A0A6YY99 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC20.45■□□□□ 0.86
TNFSF12-TNFSF13A0A0A6YY99 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC20.45■□□□□ 0.86
TNFSF12-TNFSF13A0A0A6YY99 SNX10-207ENST00000446848 2613 ntAPPRIS P2 TSL 1 (best) BASIC20.45■□□□□ 0.86
TNFSF12-TNFSF13A0A0A6YY99 EPM2A-209ENST00000638262 2679 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
TNFSF12-TNFSF13A0A0A6YY99 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
TNFSF12-TNFSF13A0A0A6YY99 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC20.45■□□□□ 0.86
TNFSF12-TNFSF13A0A0A6YY99 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC20.44■□□□□ 0.86
TNFSF12-TNFSF13A0A0A6YY99 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
TNFSF12-TNFSF13A0A0A6YY99 ANOS2P-203ENST00000472227 1816 ntBASIC20.44■□□□□ 0.86
TNFSF12-TNFSF13A0A0A6YY99 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC20.44■□□□□ 0.86
TNFSF12-TNFSF13A0A0A6YY99 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
TNFSF12-TNFSF13A0A0A6YY99 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
TNFSF12-TNFSF13A0A0A6YY99 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC20.44■□□□□ 0.86
TNFSF12-TNFSF13A0A0A6YY99 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC20.44■□□□□ 0.86
TNFSF12-TNFSF13A0A0A6YY99 HES5-201ENST00000378453 1306 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
TNFSF12-TNFSF13A0A0A6YY99 CA9-204ENST00000617161 1374 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
TNFSF12-TNFSF13A0A0A6YY99 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC20.44■□□□□ 0.86
TNFSF12-TNFSF13A0A0A6YY99 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC20.43■□□□□ 0.86
TNFSF12-TNFSF13A0A0A6YY99 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
TNFSF12-TNFSF13A0A0A6YY99 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
TNFSF12-TNFSF13A0A0A6YY99 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC20.43■□□□□ 0.86
TNFSF12-TNFSF13A0A0A6YY99 CCDC96-201ENST00000310085 2091 ntAPPRIS P1 BASIC20.43■□□□□ 0.86
TNFSF12-TNFSF13A0A0A6YY99 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC20.43■□□□□ 0.86
TNFSF12-TNFSF13A0A0A6YY99 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC20.43■□□□□ 0.86
TNFSF12-TNFSF13A0A0A6YY99 AC136475.3-202ENST00000534742 812 ntTSL 2 BASIC20.43■□□□□ 0.86
TNFSF12-TNFSF13A0A0A6YY99 AC019069.1-201ENST00000610008 1333 ntBASIC20.43■□□□□ 0.86
TNFSF12-TNFSF13A0A0A6YY99 SLC35B2-201ENST00000393810 1898 ntTSL 2 BASIC20.43■□□□□ 0.86
TNFSF12-TNFSF13A0A0A6YY99 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
TNFSF12-TNFSF13A0A0A6YY99 ARMC10-208ENST00000441711 2524 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
TNFSF12-TNFSF13A0A0A6YY99 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC20.42■□□□□ 0.86
TNFSF12-TNFSF13A0A0A6YY99 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC20.42■□□□□ 0.86
TNFSF12-TNFSF13A0A0A6YY99 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC20.42■□□□□ 0.86
TNFSF12-TNFSF13A0A0A6YY99 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
TNFSF12-TNFSF13A0A0A6YY99 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
TNFSF12-TNFSF13A0A0A6YY99 GPX4-213ENST00000622390 1002 ntTSL 5 BASIC20.42■□□□□ 0.86
TNFSF12-TNFSF13A0A0A6YY99 H19-210ENST00000439725 1929 ntTSL 2 BASIC20.42■□□□□ 0.86
TNFSF12-TNFSF13A0A0A6YY99 GBX2-201ENST00000306318 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
TNFSF12-TNFSF13A0A0A6YY99 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC20.42■□□□□ 0.86
TNFSF12-TNFSF13A0A0A6YY99 ATAD3B-201ENST00000308647 2448 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
TNFSF12-TNFSF13A0A0A6YY99 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
TNFSF12-TNFSF13A0A0A6YY99 AC092068.2-201ENST00000590491 1708 ntBASIC20.41■□□□□ 0.86
TNFSF12-TNFSF13A0A0A6YY99 P3H3-201ENST00000290510 2632 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
TNFSF12-TNFSF13A0A0A6YY99 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
TNFSF12-TNFSF13A0A0A6YY99 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
TNFSF12-TNFSF13A0A0A6YY99 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
TNFSF12-TNFSF13A0A0A6YY99 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
TNFSF12-TNFSF13A0A0A6YY99 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC20.41■□□□□ 0.86
TNFSF12-TNFSF13A0A0A6YY99 ZNRF1-205ENST00000566250 1069 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
TNFSF12-TNFSF13A0A0A6YY99 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
TNFSF12-TNFSF13A0A0A6YY99 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
TNFSF12-TNFSF13A0A0A6YY99 AC009102.2-201ENST00000606772 1639 ntBASIC20.41■□□□□ 0.86
TNFSF12-TNFSF13A0A0A6YY99 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC20.41■□□□□ 0.86
TNFSF12-TNFSF13A0A0A6YY99 HRH3-202ENST00000340177 2659 ntAPPRIS P2 TSL 1 (best) BASIC20.4■□□□□ 0.86
TNFSF12-TNFSF13A0A0A6YY99 GET4-201ENST00000265857 2090 ntAPPRIS P2 TSL 1 (best) BASIC20.4■□□□□ 0.86
TNFSF12-TNFSF13A0A0A6YY99 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
TNFSF12-TNFSF13A0A0A6YY99 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
TNFSF12-TNFSF13A0A0A6YY99 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC20.4■□□□□ 0.86
TNFSF12-TNFSF13A0A0A6YY99 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
TNFSF12-TNFSF13A0A0A6YY99 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
TNFSF12-TNFSF13A0A0A6YY99 PICSAR-201ENST00000615826 733 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
TNFSF12-TNFSF13A0A0A6YY99 ROR1-202ENST00000371080 2305 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
TNFSF12-TNFSF13A0A0A6YY99 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
TNFSF12-TNFSF13A0A0A6YY99 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC20.39■□□□□ 0.86
TNFSF12-TNFSF13A0A0A6YY99 TTLL11-202ENST00000373776 2012 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
TNFSF12-TNFSF13A0A0A6YY99 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
TNFSF12-TNFSF13A0A0A6YY99 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
TNFSF12-TNFSF13A0A0A6YY99 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.86
TNFSF12-TNFSF13A0A0A6YY99 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC20.39■□□□□ 0.85
TNFSF12-TNFSF13A0A0A6YY99 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
TNFSF12-TNFSF13A0A0A6YY99 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
TNFSF12-TNFSF13A0A0A6YY99 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC20.39■□□□□ 0.85
TNFSF12-TNFSF13A0A0A6YY99 DAZAP1-201ENST00000233078 2160 ntAPPRIS P2 TSL 1 (best) BASIC20.39■□□□□ 0.85
TNFSF12-TNFSF13A0A0A6YY99 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC20.39■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 26.4 ms