Protein–RNA interactions for Protein: Q9Y5B0

CTDP1, RNA polymerase II subunit A C-terminal domain phosphatase, humanhuman

Predicted RBP Predictions only

Length 961 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTDP1Q9Y5B0 LINC00639-201ENST00000553932 4496 ntTSL 2 BASIC16.35■□□□□ 0.21
CTDP1Q9Y5B0 FAM30A-205ENST00000630242 9612 ntTSL 2 BASIC16.35■□□□□ 0.21
CTDP1Q9Y5B0 NR0B2-201ENST00000254227 1156 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CTDP1Q9Y5B0 PCYOX1-201ENST00000264441 2959 ntTSL 5 BASIC16.35■□□□□ 0.21
CTDP1Q9Y5B0 AIF1L-205ENST00000372301 671 ntTSL 2 BASIC16.35■□□□□ 0.21
CTDP1Q9Y5B0 AC103592.1-201ENST00000394513 664 ntBASIC16.35■□□□□ 0.21
CTDP1Q9Y5B0 KRTAP2-2-201ENST00000398477 733 ntAPPRIS P2 BASIC16.35■□□□□ 0.21
CTDP1Q9Y5B0 LYPLA2P1-203ENST00000447689 696 ntBASIC16.35■□□□□ 0.21
CTDP1Q9Y5B0 CSAG1-204ENST00000452779 627 ntAPPRIS P2 TSL 1 (best) BASIC16.35■□□□□ 0.21
CTDP1Q9Y5B0 SIAH2-AS1-201ENST00000461943 441 ntTSL 4 BASIC16.35■□□□□ 0.21
CTDP1Q9Y5B0 GOLGA2P8-201ENST00000505201 779 ntBASIC16.35■□□□□ 0.21
CTDP1Q9Y5B0 AC010285.2-201ENST00000510240 569 ntTSL 4 BASIC16.35■□□□□ 0.21
CTDP1Q9Y5B0 CTBP2P4-201ENST00000513884 920 ntBASIC16.35■□□□□ 0.21
CTDP1Q9Y5B0 RNA5SP406-201ENST00000516106 112 ntBASIC16.35■□□□□ 0.21
CTDP1Q9Y5B0 ACTN1-AS1-202ENST00000553961 599 ntTSL 4 BASIC16.35■□□□□ 0.21
CTDP1Q9Y5B0 AP005264.5-201ENST00000590066 467 ntBASIC16.35■□□□□ 0.21
CTDP1Q9Y5B0 AC011500.3-201ENST00000594676 647 ntTSL 4 BASIC16.35■□□□□ 0.21
CTDP1Q9Y5B0 EAF1-AS1-208ENST00000608408 770 ntTSL 5 BASIC16.35■□□□□ 0.21
CTDP1Q9Y5B0 AC007250.1-201ENST00000608934 338 ntBASIC16.35■□□□□ 0.21
CTDP1Q9Y5B0 GPR137C-201ENST00000321662 3888 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CTDP1Q9Y5B0 ITPK1-207ENST00000555495 3035 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
CTDP1Q9Y5B0 ANKRD36-204ENST00000461153 6102 ntAPPRIS P2 TSL 5 BASIC16.35■□□□□ 0.21
CTDP1Q9Y5B0 PVR-203ENST00000403059 3078 ntAPPRIS ALT2 TSL 2 BASIC16.35■□□□□ 0.21
CTDP1Q9Y5B0 DGKD-202ENST00000409813 6228 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
CTDP1Q9Y5B0 RHOXF1P3-203ENST00000640298 2668 ntTSL 5 BASIC16.35■□□□□ 0.21
CTDP1Q9Y5B0 VARS2-211ENST00000541562 3566 ntTSL 2 BASIC16.35■□□□□ 0.21
CTDP1Q9Y5B0 PPP6R2-202ENST00000359139 4035 ntAPPRIS ALT2 TSL 2 BASIC16.35■□□□□ 0.21
CTDP1Q9Y5B0 LINC01270-201ENST00000371639 2281 ntTSL 2 BASIC16.35■□□□□ 0.21
CTDP1Q9Y5B0 PCNA-202ENST00000379160 1359 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
CTDP1Q9Y5B0 ATP2A3-202ENST00000352011 3274 ntTSL 5 BASIC16.35■□□□□ 0.21
CTDP1Q9Y5B0 NKIRAS1-208ENST00000443659 2391 ntAPPRIS P2 TSL 5 BASIC16.35■□□□□ 0.21
CTDP1Q9Y5B0 LRRC8A-203ENST00000372600 4355 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CTDP1Q9Y5B0 LILRA2-203ENST00000391737 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
CTDP1Q9Y5B0 RPL13AP3-202ENST00000494676 1473 ntBASIC16.35■□□□□ 0.21
CTDP1Q9Y5B0 ANKDD1A-202ENST00000395720 1518 ntTSL 5 BASIC16.35■□□□□ 0.21
CTDP1Q9Y5B0 MPI-203ENST00000535694 1523 ntTSL 2 BASIC16.35■□□□□ 0.21
CTDP1Q9Y5B0 RASGEF1C-206ENST00000522500 2055 ntTSL 2 BASIC16.34■□□□□ 0.21
CTDP1Q9Y5B0 CHRNA1-204ENST00000409323 1585 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
CTDP1Q9Y5B0 OXA1L-212ENST00000604262 1571 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CTDP1Q9Y5B0 FCHSD2-204ENST00000409418 3154 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
CTDP1Q9Y5B0 FMR1-215ENST00000616382 1648 ntTSL 5 BASIC16.34■□□□□ 0.21
CTDP1Q9Y5B0 VILL-202ENST00000383759 2787 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
CTDP1Q9Y5B0 ICA1L-201ENST00000358299 3457 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
CTDP1Q9Y5B0 CEP63-212ENST00000513612 2903 ntAPPRIS P3 TSL 2 BASIC16.34■□□□□ 0.21
CTDP1Q9Y5B0 MIR3936HG-204ENST00000621103 1793 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
CTDP1Q9Y5B0 HNRNPUL1-201ENST00000263367 2952 ntTSL 2 BASIC16.34■□□□□ 0.21
CTDP1Q9Y5B0 ABI2-201ENST00000261016 6634 ntTSL 2 BASIC16.34■□□□□ 0.21
CTDP1Q9Y5B0 SPIN3-204ENST00000638257 4835 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
CTDP1Q9Y5B0 RAB43-202ENST00000393304 4230 ntAPPRIS P1 TSL 4 BASIC16.34■□□□□ 0.21
CTDP1Q9Y5B0 SMARCA4-202ENST00000413806 5512 ntTSL 5 BASIC16.34■□□□□ 0.21
CTDP1Q9Y5B0 PLPPR1-201ENST00000374874 2495 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CTDP1Q9Y5B0 SPIRE1-201ENST00000309836 1877 ntTSL 2 BASIC16.34■□□□□ 0.21
CTDP1Q9Y5B0 EPN2-210ENST00000571254 1883 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
CTDP1Q9Y5B0 TMPRSS6-204ENST00000406856 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
CTDP1Q9Y5B0 REPIN1-209ENST00000479668 3182 ntTSL 2 BASIC16.34■□□□□ 0.21
CTDP1Q9Y5B0 ANK1-203ENST00000314214 1185 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
CTDP1Q9Y5B0 LCE3B-201ENST00000335633 288 ntAPPRIS P1 BASIC16.34■□□□□ 0.21
CTDP1Q9Y5B0 AL935212.1-201ENST00000377548 906 ntTSL 5 BASIC16.34■□□□□ 0.21
CTDP1Q9Y5B0 IGHV3-49-201ENST00000390625 439 ntAPPRIS P1 BASIC16.34■□□□□ 0.21
CTDP1Q9Y5B0 FLJ37035-201ENST00000419400 446 ntTSL 3 BASIC16.34■□□□□ 0.21
CTDP1Q9Y5B0 CSNK1G2P1-201ENST00000442675 955 ntBASIC16.34■□□□□ 0.21
CTDP1Q9Y5B0 ASGR2-203ENST00000446679 879 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
CTDP1Q9Y5B0 TIMP1-205ENST00000456754 1095 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
CTDP1Q9Y5B0 AC025154.2-203ENST00000550214 1031 ntTSL 2 BASIC16.34■□□□□ 0.21
CTDP1Q9Y5B0 AC006435.2-201ENST00000574290 846 ntTSL 5 BASIC16.34■□□□□ 0.21
CTDP1Q9Y5B0 AC011481.2-201ENST00000585408 426 ntTSL 3 BASIC16.34■□□□□ 0.21
CTDP1Q9Y5B0 ZNF790-AS1-203ENST00000588906 850 ntTSL 2 BASIC16.34■□□□□ 0.21
CTDP1Q9Y5B0 AL359091.4-201ENST00000610052 409 ntBASIC16.34■□□□□ 0.21
CTDP1Q9Y5B0 AC105137.3-201ENST00000617588 984 ntBASIC16.34■□□□□ 0.21
CTDP1Q9Y5B0 HIST1H3F-201ENST00000618052 411 ntAPPRIS P1 BASIC16.34■□□□□ 0.21
CTDP1Q9Y5B0 ST5-261ENST00000626808 1071 ntTSL 5 BASIC16.34■□□□□ 0.21
CTDP1Q9Y5B0 KITLG-202ENST00000347404 1948 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
CTDP1Q9Y5B0 RELL1-201ENST00000314117 1326 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CTDP1Q9Y5B0 TMPRSS3-202ENST00000398397 1342 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
CTDP1Q9Y5B0 BIN3-202ENST00000399977 1340 ntTSL 2 BASIC16.34■□□□□ 0.21
CTDP1Q9Y5B0 GCK-204ENST00000403799 2729 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CTDP1Q9Y5B0 GTF2H1-203ENST00000453096 2707 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
CTDP1Q9Y5B0 L2HGDH-201ENST00000261699 1377 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
CTDP1Q9Y5B0 MPHOSPH10-205ENST00000498451 2068 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
CTDP1Q9Y5B0 PLSCR1-214ENST00000487389 1443 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
CTDP1Q9Y5B0 TARSL2-201ENST00000335968 3610 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
CTDP1Q9Y5B0 AGPAT3-218ENST00000546158 2199 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
CTDP1Q9Y5B0 ACTL7A-201ENST00000333999 1494 ntAPPRIS P1 BASIC16.34■□□□□ 0.21
CTDP1Q9Y5B0 AC004754.1-201ENST00000600536 2242 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
CTDP1Q9Y5B0 SOAT1-203ENST00000539888 6794 ntTSL 2 BASIC16.34■□□□□ 0.21
CTDP1Q9Y5B0 MS4A15-201ENST00000337911 1536 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
CTDP1Q9Y5B0 AC126335.2-201ENST00000623362 4637 ntBASIC16.34■□□□□ 0.21
CTDP1Q9Y5B0 MAPT-206ENST00000415613 2331 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
CTDP1Q9Y5B0 PPP1R21-202ENST00000294952 3142 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CTDP1Q9Y5B0 TCF25-202ENST00000263347 2377 ntTSL 5 BASIC16.34■□□□□ 0.21
CTDP1Q9Y5B0 FOXP3-203ENST00000376207 2382 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CTDP1Q9Y5B0 NCK2-203ENST00000393349 2371 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CTDP1Q9Y5B0 WASF3-202ENST00000361042 4823 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
CTDP1Q9Y5B0 ZCCHC17-201ENST00000344147 1605 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CTDP1Q9Y5B0 CRYBG2-210ENST00000527815 2523 ntAPPRIS ALT2 TSL 2 BASIC16.34■□□□□ 0.21
CTDP1Q9Y5B0 CIART-201ENST00000290363 1746 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.21
CTDP1Q9Y5B0 ARHGAP20-201ENST00000260283 6189 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.21
CTDP1Q9Y5B0 ADAM15-205ENST00000360674 2732 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.21
CTDP1Q9Y5B0 TMEM45A-202ENST00000403410 1910 ntTSL 5 BASIC16.33■□□□□ 0.21
CTDP1Q9Y5B0 MRI1-202ENST00000319545 3027 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 124.8 ms