Protein–RNA interactions for Protein: Q9UNS2

COPS3, COP9 signalosome complex subunit 3, humanhuman

Predictions only

Length 423 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3Q9UNS2 PPY2P-202ENST00000583761 657 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
COPS3Q9UNS2 PPP1R14A-203ENST00000587515 607 ntTSL 2 BASIC12.69□□□□□ -0.38
COPS3Q9UNS2 TRAPPC6A-204ENST00000588062 695 ntTSL 2 BASIC12.69□□□□□ -0.38
COPS3Q9UNS2 AC132192.2-201ENST00000596206 1147 ntBASIC12.69□□□□□ -0.38
COPS3Q9UNS2 AC008735.3-201ENST00000596646 500 ntBASIC12.69□□□□□ -0.38
COPS3Q9UNS2 LCN8-205ENST00000612714 638 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
COPS3Q9UNS2 LINC02351-201ENST00000614728 289 ntTSL 2 BASIC12.69□□□□□ -0.38
COPS3Q9UNS2 LINC01726-201ENST00000624692 1253 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
COPS3Q9UNS2 AC093326.2-201ENST00000640770 729 ntTSL 5 BASIC12.69□□□□□ -0.38
COPS3Q9UNS2 MKRN1-201ENST00000255977 3151 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
COPS3Q9UNS2 PCDHB18P-202ENST00000526308 3197 ntBASIC12.69□□□□□ -0.38
COPS3Q9UNS2 SLC51A-201ENST00000296327 1463 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
COPS3Q9UNS2 CKMT2-203ENST00000437669 1479 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
COPS3Q9UNS2 ALKBH5-201ENST00000399138 2748 ntAPPRIS P1 TSL 2 BASIC12.69□□□□□ -0.38
COPS3Q9UNS2 RBM10-202ENST00000345781 3108 ntAPPRIS ALT2 TSL 2 BASIC12.69□□□□□ -0.38
COPS3Q9UNS2 TRMT2B-206ENST00000545398 3106 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
COPS3Q9UNS2 GTF3C2-214ENST00000622534 1858 ntTSL 5 BASIC12.69□□□□□ -0.38
COPS3Q9UNS2 TRAF3IP3-204ENST00000367026 2058 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
COPS3Q9UNS2 AC125807.2-201ENST00000513358 3514 ntBASIC12.69□□□□□ -0.38
COPS3Q9UNS2 MSH5-202ENST00000375740 2669 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
COPS3Q9UNS2 RGS3-205ENST00000374134 2862 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
COPS3Q9UNS2 PRPSAP1-206ENST00000446526 3660 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
COPS3Q9UNS2 COL2A1-201ENST00000337299 4257 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
COPS3Q9UNS2 SH3GLB2-205ENST00000416629 1415 ntTSL 5 BASIC12.69□□□□□ -0.38
COPS3Q9UNS2 NOP14-AS1-201ENST00000503709 1616 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
COPS3Q9UNS2 TP73-207ENST00000378290 1831 ntTSL 2 BASIC12.69□□□□□ -0.38
COPS3Q9UNS2 KIF12-201ENST00000374118 2001 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
COPS3Q9UNS2 FAM224B-201ENST00000458667 2032 ntTSL 2 BASIC12.69□□□□□ -0.38
COPS3Q9UNS2 SLC43A3-214ENST00000529554 2207 ntAPPRIS P3 TSL 2 BASIC12.69□□□□□ -0.38
COPS3Q9UNS2 EPB42-210ENST00000622454 2227 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
COPS3Q9UNS2 ARHGEF17-201ENST00000263674 7853 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
COPS3Q9UNS2 OFD1-201ENST00000340096 3611 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
COPS3Q9UNS2 NUTM2E-202ENST00000602967 3623 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
COPS3Q9UNS2 NEK4-202ENST00000383721 2576 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
COPS3Q9UNS2 CETP-201ENST00000200676 1791 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
COPS3Q9UNS2 AC009474.1-201ENST00000455096 1565 ntBASIC12.69□□□□□ -0.38
COPS3Q9UNS2 ADCYAP1R1-201ENST00000304166 6487 ntAPPRIS P3 TSL 2 BASIC12.69□□□□□ -0.38
COPS3Q9UNS2 HPS1-215ENST00000613394 3714 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
COPS3Q9UNS2 ZMYM3-207ENST00000373998 6067 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
COPS3Q9UNS2 C11orf87-201ENST00000327419 5884 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
COPS3Q9UNS2 CMIP-208ENST00000566462 3512 ntTSL 4 BASIC12.68□□□□□ -0.38
COPS3Q9UNS2 NLGN3-206ENST00000612180 3319 ntTSL 5 BASIC12.68□□□□□ -0.38
COPS3Q9UNS2 NRXN1-259ENST00000637511 3651 ntTSL 5 BASIC12.68□□□□□ -0.38
COPS3Q9UNS2 PFKM-201ENST00000312352 3078 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
COPS3Q9UNS2 PPFIA4-204ENST00000447715 6349 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
COPS3Q9UNS2 ZNF263-202ENST00000538765 1721 ntTSL 2 BASIC12.68□□□□□ -0.38
COPS3Q9UNS2 SLC25A26-202ENST00000354883 2673 ntAPPRIS P1 TSL 2 BASIC12.68□□□□□ -0.38
COPS3Q9UNS2 TEKT2-201ENST00000207457 1509 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
COPS3Q9UNS2 KAT8-201ENST00000219797 1525 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
COPS3Q9UNS2 TOLLIP-203ENST00000525159 3429 ntTSL 2 BASIC12.68□□□□□ -0.38
COPS3Q9UNS2 ITGA6-202ENST00000409080 5306 ntTSL 2 BASIC12.68□□□□□ -0.38
COPS3Q9UNS2 AC105345.1-202ENST00000382488 3204 ntTSL 2 BASIC12.68□□□□□ -0.38
COPS3Q9UNS2 KLK3-216ENST00000617027 1341 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
COPS3Q9UNS2 MSH2-206ENST00000543555 3024 ntTSL 2 BASIC12.68□□□□□ -0.38
COPS3Q9UNS2 PDE9A-201ENST00000291539 2058 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
COPS3Q9UNS2 MKS1-201ENST00000313863 2091 ntTSL 5 BASIC12.68□□□□□ -0.38
COPS3Q9UNS2 TONSL-201ENST00000409379 4502 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
COPS3Q9UNS2 TMBIM6-217ENST00000549385 2771 ntAPPRIS P3 TSL 5 BASIC12.68□□□□□ -0.38
COPS3Q9UNS2 IGFN1-201ENST00000295591 4439 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
COPS3Q9UNS2 YTHDF3-201ENST00000517371 3122 ntTSL 3 BASIC12.68□□□□□ -0.38
COPS3Q9UNS2 CCSER2-203ENST00000372088 7657 ntTSL 2 BASIC12.68□□□□□ -0.38
COPS3Q9UNS2 CNTD1-204ENST00000588408 2369 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
COPS3Q9UNS2 PGAP2-202ENST00000300730 1843 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
COPS3Q9UNS2 PGAP2-203ENST00000396986 1837 ntTSL 2 BASIC12.68□□□□□ -0.38
COPS3Q9UNS2 NME3-201ENST00000219302 1069 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
COPS3Q9UNS2 POLR2I-201ENST00000221859 913 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
COPS3Q9UNS2 MYMK-201ENST00000339996 818 ntAPPRIS P1 TSL 2 BASIC12.68□□□□□ -0.38
COPS3Q9UNS2 KIAA0907-201ENST00000368319 1155 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
COPS3Q9UNS2 EDF1-203ENST00000371649 790 ntTSL 2 BASIC12.68□□□□□ -0.38
COPS3Q9UNS2 HOPX-203ENST00000381255 1164 ntAPPRIS P1 TSL 2 BASIC12.68□□□□□ -0.38
COPS3Q9UNS2 MIR1202-201ENST00000408529 83 ntBASIC12.68□□□□□ -0.38
COPS3Q9UNS2 LINC01759-201ENST00000412639 985 ntTSL 3 BASIC12.68□□□□□ -0.38
COPS3Q9UNS2 AC016694.1-201ENST00000434179 700 ntBASIC12.68□□□□□ -0.38
COPS3Q9UNS2 AC128709.2-201ENST00000438408 558 ntTSL 4 BASIC12.68□□□□□ -0.38
COPS3Q9UNS2 HIST2H2BB-201ENST00000449108 381 ntBASIC12.68□□□□□ -0.38
COPS3Q9UNS2 AC097103.2-201ENST00000504670 602 ntTSL 2 BASIC12.68□□□□□ -0.38
COPS3Q9UNS2 CLNS1A-210ENST00000528364 953 ntAPPRIS P1 TSL 3 BASIC12.68□□□□□ -0.38
COPS3Q9UNS2 POLD4-211ENST00000539074 714 ntTSL 3 BASIC12.68□□□□□ -0.38
COPS3Q9UNS2 AC011603.2-203ENST00000547387 897 ntTSL 3 BASIC12.68□□□□□ -0.38
COPS3Q9UNS2 HOPX-210ENST00000553379 1001 ntAPPRIS P1 TSL 2 BASIC12.68□□□□□ -0.38
COPS3Q9UNS2 HOPX-212ENST00000555760 1139 ntAPPRIS P1 TSL 3 BASIC12.68□□□□□ -0.38
COPS3Q9UNS2 HOPX-213ENST00000556376 1064 ntAPPRIS P1 TSL 3 BASIC12.68□□□□□ -0.38
COPS3Q9UNS2 C2orf69P2-201ENST00000562032 1123 ntBASIC12.68□□□□□ -0.38
COPS3Q9UNS2 AC009133.1-202ENST00000563806 494 ntTSL 3 BASIC12.68□□□□□ -0.38
COPS3Q9UNS2 PAM16-211ENST00000575848 518 ntTSL 3 BASIC12.68□□□□□ -0.38
COPS3Q9UNS2 PAM16-214ENST00000576217 493 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
COPS3Q9UNS2 AC025048.1-201ENST00000592317 542 ntTSL 4 BASIC12.68□□□□□ -0.38
COPS3Q9UNS2 AC015936.2-201ENST00000593177 259 ntBASIC12.68□□□□□ -0.38
COPS3Q9UNS2 AC005253.2-201ENST00000593791 432 ntTSL 3 BASIC12.68□□□□□ -0.38
COPS3Q9UNS2 AC233724.13-201ENST00000598383 410 ntBASIC12.68□□□□□ -0.38
COPS3Q9UNS2 AC021016.3-201ENST00000608367 477 ntBASIC12.68□□□□□ -0.38
COPS3Q9UNS2 AL022328.1-201ENST00000610050 478 ntBASIC12.68□□□□□ -0.38
COPS3Q9UNS2 HTT-AS1_1.1-201ENST00000612914 230 ntBASIC12.68□□□□□ -0.38
COPS3Q9UNS2 LARP4-220ENST00000615080 856 ntTSL 5 BASIC12.68□□□□□ -0.38
COPS3Q9UNS2 ZNF655-225ENST00000626122 705 ntTSL 5 BASIC12.68□□□□□ -0.38
COPS3Q9UNS2 AC009975.2-202ENST00000634539 854 ntTSL 5 BASIC12.68□□□□□ -0.38
COPS3Q9UNS2 AL591163.1-201ENST00000641757 987 ntBASIC12.68□□□□□ -0.38
COPS3Q9UNS2 CAPN14-202ENST00000403897 2197 ntAPPRIS P1 TSL 2 BASIC12.68□□□□□ -0.38
COPS3Q9UNS2 USP39-220ENST00000613444 2161 ntTSL 2 BASIC12.68□□□□□ -0.38
COPS3Q9UNS2 AC144450.1-201ENST00000366424 1641 ntTSL 2 BASIC12.68□□□□□ -0.38
Retrieved 100 of 98,524 protein–RNA pairs in 39.4 ms