Protein–RNA interactions for Protein: Q9UBX2

DUX4, Double homeobox protein 4, humanhuman

Predictions only

Length 424 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DUX4Q9UBX2 TPM3P9-201ENST00000424846 2920 ntTSL 1 (best) BASIC12.58□□□□□ -0.39
DUX4Q9UBX2 EMILIN1-201ENST00000380320 3943 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
DUX4Q9UBX2 ZNF23-203ENST00000393539 3242 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.39
DUX4Q9UBX2 MTUS2-206ENST00000612955 7430 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
DUX4Q9UBX2 CRELD1-202ENST00000383811 2696 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
DUX4Q9UBX2 NHEG1-202ENST00000432330 1357 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
DUX4Q9UBX2 SRSF5-203ENST00000553521 2815 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
DUX4Q9UBX2 SPHK2-201ENST00000245222 2963 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
DUX4Q9UBX2 ITGB2-201ENST00000302347 2955 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
DUX4Q9UBX2 KAT8-201ENST00000219797 1525 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
DUX4Q9UBX2 SLC9B2-202ENST00000394785 3126 ntAPPRIS P1 TSL 2 BASIC12.58□□□□□ -0.4
DUX4Q9UBX2 DDX31-202ENST00000372153 3285 ntAPPRIS P2 TSL 1 (best) BASIC12.58□□□□□ -0.4
DUX4Q9UBX2 CCNE1-203ENST00000444983 1680 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
DUX4Q9UBX2 ALG3-207ENST00000455059 1697 ntTSL 5 BASIC12.58□□□□□ -0.4
DUX4Q9UBX2 SCLT1-209ENST00000511426 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
DUX4Q9UBX2 USH1G-202ENST00000614341 3558 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
DUX4Q9UBX2 AC068760.1-201ENST00000493579 1953 ntBASIC12.58□□□□□ -0.4
DUX4Q9UBX2 PDP1-203ENST00000517764 2140 ntAPPRIS P3 TSL 2 BASIC12.58□□□□□ -0.4
DUX4Q9UBX2 B9D1-201ENST00000261499 908 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
DUX4Q9UBX2 PDE6D-201ENST00000287600 1175 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
DUX4Q9UBX2 B9D1-203ENST00000395615 805 ntTSL 3 BASIC12.58□□□□□ -0.4
DUX4Q9UBX2 CRYAA-202ENST00000398132 826 ntTSL 2 BASIC12.58□□□□□ -0.4
DUX4Q9UBX2 ERG-207ENST00000398919 1868 ntAPPRIS ALT1 TSL 1 (best) BASIC12.58□□□□□ -0.4
DUX4Q9UBX2 MIR1909-201ENST00000411312 80 ntBASIC12.58□□□□□ -0.4
DUX4Q9UBX2 AL035588.1-201ENST00000438967 408 ntTSL 3 BASIC12.58□□□□□ -0.4
DUX4Q9UBX2 C14orf178-202ENST00000439131 632 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
DUX4Q9UBX2 KCNQ1-AS1-201ENST00000440887 1084 ntTSL 5 BASIC12.58□□□□□ -0.4
DUX4Q9UBX2 GGTLC2-202ENST00000448514 678 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
DUX4Q9UBX2 SEPT8-212ENST00000458488 1726 ntTSL 5 BASIC12.58□□□□□ -0.4
DUX4Q9UBX2 AL354710.2-201ENST00000468244 550 ntTSL 4 BASIC12.58□□□□□ -0.4
DUX4Q9UBX2 CACNA2D4-208ENST00000538027 952 ntTSL 5 BASIC12.58□□□□□ -0.4
DUX4Q9UBX2 PIAS1-202ENST00000545237 2932 ntTSL 2 BASIC12.58□□□□□ -0.4
DUX4Q9UBX2 KRT90P-201ENST00000549264 1064 ntBASIC12.58□□□□□ -0.4
DUX4Q9UBX2 AC091891.1-201ENST00000560688 688 ntTSL 3 BASIC12.58□□□□□ -0.4
DUX4Q9UBX2 MIF4GD-208ENST00000579297 1419 ntTSL 2 BASIC12.58□□□□□ -0.4
DUX4Q9UBX2 ZNF790-AS1-204ENST00000589556 650 ntTSL 2 BASIC12.58□□□□□ -0.4
DUX4Q9UBX2 C19orf53-206ENST00000593274 491 ntTSL 2 BASIC12.58□□□□□ -0.4
DUX4Q9UBX2 EGLN2-209ENST00000594140 991 ntTSL 2 BASIC12.58□□□□□ -0.4
DUX4Q9UBX2 AC010336.6-201ENST00000595107 528 ntTSL 4 BASIC12.58□□□□□ -0.4
DUX4Q9UBX2 HIST1H3I-201ENST00000616365 411 ntAPPRIS P1 BASIC12.58□□□□□ -0.4
DUX4Q9UBX2 NOP2-222ENST00000617555 2017 ntTSL 5 BASIC12.58□□□□□ -0.4
DUX4Q9UBX2 Metazoa_SRP.80-201ENST00000619894 320 ntBASIC12.58□□□□□ -0.4
DUX4Q9UBX2 ETV2-208ENST00000621247 941 ntTSL 5 BASIC12.58□□□□□ -0.4
DUX4Q9UBX2 FP236240.1-204ENST00000624932 712 ntTSL 2 BASIC12.58□□□□□ -0.4
DUX4Q9UBX2 RAB34-222ENST00000625712 994 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
DUX4Q9UBX2 DNMT1-202ENST00000359526 5206 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
DUX4Q9UBX2 TGFBRAP1-201ENST00000258449 2827 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
DUX4Q9UBX2 TMEM164-203ENST00000372072 4975 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
DUX4Q9UBX2 LOXHD1-210ENST00000536736 6848 ntAPPRIS P5 TSL 5 BASIC12.58□□□□□ -0.4
DUX4Q9UBX2 ORMDL3-202ENST00000394169 2230 ntAPPRIS P1 TSL 2 BASIC12.58□□□□□ -0.4
DUX4Q9UBX2 HECW2-202ENST00000409111 6692 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
DUX4Q9UBX2 FAM122B-203ENST00000370790 4246 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
DUX4Q9UBX2 PDGFRL-201ENST00000251630 1901 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
DUX4Q9UBX2 RNF213-201ENST00000319921 5316 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
DUX4Q9UBX2 NME1-209ENST00000511355 1645 ntTSL 5 BASIC12.58□□□□□ -0.4
DUX4Q9UBX2 TRIM46-205ENST00000392451 3195 ntTSL 2 BASIC12.58□□□□□ -0.4
DUX4Q9UBX2 ATP8A1-202ENST00000381668 8270 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
DUX4Q9UBX2 GNB5-201ENST00000261837 8906 ntAPPRIS P3 TSL 5 BASIC12.58□□□□□ -0.4
DUX4Q9UBX2 AC016397.2-201ENST00000624848 1985 ntBASIC12.58□□□□□ -0.4
DUX4Q9UBX2 PRSS54-201ENST00000219301 1810 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
DUX4Q9UBX2 SIGLEC9-201ENST00000250360 1690 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
DUX4Q9UBX2 PLEKHB2-205ENST00000409279 2488 ntAPPRIS ALT1 TSL 2 BASIC12.57□□□□□ -0.4
DUX4Q9UBX2 PAPLN-203ENST00000554301 4090 ntAPPRIS ALT2 TSL 2 BASIC12.57□□□□□ -0.4
DUX4Q9UBX2 ADAM19-201ENST00000257527 6481 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
DUX4Q9UBX2 FGFRL1-201ENST00000264748 3100 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
DUX4Q9UBX2 SPTSSB-201ENST00000359175 3103 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
DUX4Q9UBX2 CCHCR1-203ENST00000396268 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
DUX4Q9UBX2 MOG-221ENST00000376917 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
DUX4Q9UBX2 RNF130-207ENST00000522208 9945 ntTSL 5 BASIC12.57□□□□□ -0.4
DUX4Q9UBX2 LY9-204ENST00000368039 1364 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
DUX4Q9UBX2 C8B-201ENST00000371237 2037 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
DUX4Q9UBX2 SYNPO-202ENST00000394243 7063 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
DUX4Q9UBX2 SMPDL3A-201ENST00000368440 1851 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
DUX4Q9UBX2 DNAJA1-201ENST00000330899 2381 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
DUX4Q9UBX2 NCAPG-201ENST00000251496 4661 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
DUX4Q9UBX2 GINS3-203ENST00000426538 1728 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
DUX4Q9UBX2 ARMC8-220ENST00000489213 1714 ntTSL 5 BASIC12.57□□□□□ -0.4
DUX4Q9UBX2 SLC5A9-210ENST00000533824 2219 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
DUX4Q9UBX2 CASC2-202ENST00000426021 3232 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
DUX4Q9UBX2 NDST1-201ENST00000261797 8030 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
DUX4Q9UBX2 TM4SF19-203ENST00000446879 1582 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
DUX4Q9UBX2 RPL27A-201ENST00000314138 4916 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
DUX4Q9UBX2 AC090099.1-203ENST00000527059 2945 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
DUX4Q9UBX2 MAP3K12-203ENST00000547035 2944 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
DUX4Q9UBX2 ELP6-201ENST00000296149 1401 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
DUX4Q9UBX2 TCF7-218ENST00000520958 1408 ntTSL 2 BASIC12.57□□□□□ -0.4
DUX4Q9UBX2 ESRRB-207ENST00000556177 1427 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
DUX4Q9UBX2 PNMA3-202ENST00000593810 1432 ntAPPRIS P1 BASIC12.57□□□□□ -0.4
DUX4Q9UBX2 RETN-201ENST00000221515 520 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
DUX4Q9UBX2 CYTL1-201ENST00000307746 1003 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
DUX4Q9UBX2 LBX2-201ENST00000341396 886 ntTSL 3 BASIC12.57□□□□□ -0.4
DUX4Q9UBX2 PLAC9-201ENST00000372263 785 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
DUX4Q9UBX2 CLCN6-207ENST00000376497 814 ntTSL 3 BASIC12.57□□□□□ -0.4
DUX4Q9UBX2 FES-203ENST00000394302 2133 ntTSL 5 BASIC12.57□□□□□ -0.4
DUX4Q9UBX2 MNX1-AS2-201ENST00000429228 374 ntTSL 3 BASIC12.57□□□□□ -0.4
DUX4Q9UBX2 HIST2H2BA-202ENST00000430394 752 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
DUX4Q9UBX2 KRT43P-201ENST00000434019 910 ntBASIC12.57□□□□□ -0.4
DUX4Q9UBX2 AC234783.1-201ENST00000441761 496 ntBASIC12.57□□□□□ -0.4
DUX4Q9UBX2 SIRPB2-203ENST00000444444 884 ntTSL 2 BASIC12.57□□□□□ -0.4
DUX4Q9UBX2 DMKN-216ENST00000458071 510 ntAPPRIS ALT2 TSL 3 BASIC12.57□□□□□ -0.4
Retrieved 100 of 98,524 protein–RNA pairs in 64.6 ms