Protein–RNA interactions for Protein: Q9P2X8

LINC00474, Putative uncharacterized protein encoded by LINC00474, humanhuman

Predictions only

Length 69 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00474Q9P2X8 IGHV3OR16-9-202ENST00000558425 288 ntAPPRIS ALT2 BASIC9.36□□□□□ -0.91
LINC00474Q9P2X8 MIR497HG-202ENST00000572453 3838 ntBASIC9.36□□□□□ -0.91
LINC00474Q9P2X8 AC129510.1-201ENST00000579979 555 ntTSL 3 BASIC9.36□□□□□ -0.91
LINC00474Q9P2X8 RANGRF-205ENST00000580434 749 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
LINC00474Q9P2X8 SNHG15-207ENST00000582727 1039 ntTSL 2 BASIC9.36□□□□□ -0.91
LINC00474Q9P2X8 NCR1-206ENST00000598576 996 ntAPPRIS ALT2 TSL 5 BASIC9.36□□□□□ -0.91
LINC00474Q9P2X8 AC021016.3-201ENST00000608367 477 ntBASIC9.36□□□□□ -0.91
LINC00474Q9P2X8 AL358473.2-201ENST00000610411 556 ntTSL 4 BASIC9.36□□□□□ -0.91
LINC00474Q9P2X8 KLF3-AS1-207ENST00000620339 558 ntTSL 4 BASIC9.36□□□□□ -0.91
LINC00474Q9P2X8 PRRC2B-210ENST00000638390 1084 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
LINC00474Q9P2X8 AL391650.2-201ENST00000640097 941 ntTSL 5 BASIC9.36□□□□□ -0.91
LINC00474Q9P2X8 MEF2C-AS1-210ENST00000514011 1754 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
LINC00474Q9P2X8 DISC1-206ENST00000366637 6848 ntAPPRIS ALT2 TSL 5 BASIC9.36□□□□□ -0.91
LINC00474Q9P2X8 TRPV1-206ENST00000571088 4105 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
LINC00474Q9P2X8 FER1L4-204ENST00000430275 3281 ntTSL 5 BASIC9.36□□□□□ -0.91
LINC00474Q9P2X8 ADCY7-201ENST00000254235 6138 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
LINC00474Q9P2X8 SIGLEC12-203ENST00000598614 1434 ntTSL 5 BASIC9.36□□□□□ -0.91
LINC00474Q9P2X8 MCRS1-211ENST00000550165 1936 ntAPPRIS P1 TSL 5 BASIC9.36□□□□□ -0.91
LINC00474Q9P2X8 USP33-202ENST00000370792 2917 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
LINC00474Q9P2X8 VPS13A-204ENST00000376634 10269 ntAPPRIS ALT2 TSL 1 (best) BASIC9.36□□□□□ -0.91
LINC00474Q9P2X8 PCDHB17P-202ENST00000623466 3066 ntBASIC9.36□□□□□ -0.91
LINC00474Q9P2X8 AC058822.1-201ENST00000507166 2550 ntAPPRIS P1 TSL 2 BASIC9.36□□□□□ -0.91
LINC00474Q9P2X8 TPRX1-202ENST00000535759 2059 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
LINC00474Q9P2X8 TBX3-202ENST00000349155 4723 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
LINC00474Q9P2X8 UBXN11-202ENST00000357089 1555 ntAPPRIS ALT2 TSL 5 BASIC9.36□□□□□ -0.91
LINC00474Q9P2X8 TBX3-201ENST00000257566 4208 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
LINC00474Q9P2X8 PLTP-203ENST00000372431 1743 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
LINC00474Q9P2X8 CCDC57-202ENST00000389641 3000 ntAPPRIS ALT2 TSL 5 BASIC9.36□□□□□ -0.91
LINC00474Q9P2X8 CCDC57-206ENST00000392347 3000 ntAPPRIS ALT2 TSL 1 (best) BASIC9.36□□□□□ -0.91
LINC00474Q9P2X8 STRA6-205ENST00000432245 1889 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
LINC00474Q9P2X8 ARHGEF3-212ENST00000495373 2024 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
LINC00474Q9P2X8 KRT8P28-201ENST00000433288 1390 ntBASIC9.36□□□□□ -0.91
LINC00474Q9P2X8 CYP4B1-201ENST00000271153 2171 ntAPPRIS P3 TSL 1 (best) BASIC9.36□□□□□ -0.91
LINC00474Q9P2X8 AGPAT1-205ENST00000395497 2168 ntAPPRIS P1 TSL 5 BASIC9.36□□□□□ -0.91
LINC00474Q9P2X8 NUTM2E-202ENST00000602967 3623 ntAPPRIS ALT2 TSL 5 BASIC9.36□□□□□ -0.91
LINC00474Q9P2X8 SPTB-202ENST00000389720 6321 ntTSL 5 BASIC9.36□□□□□ -0.91
LINC00474Q9P2X8 NIPAL3-202ENST00000339255 1676 ntTSL 5 BASIC9.36□□□□□ -0.91
LINC00474Q9P2X8 AKAP13-201ENST00000361243 9468 ntAPPRIS P4 TSL 1 (best) BASIC9.35□□□□□ -0.91
LINC00474Q9P2X8 WAC-AS1-202ENST00000528337 2608 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
LINC00474Q9P2X8 AC215219.1-201ENST00000400706 1817 ntBASIC9.35□□□□□ -0.91
LINC00474Q9P2X8 LINC02346-201ENST00000383019 1967 ntTSL 2 BASIC9.35□□□□□ -0.91
LINC00474Q9P2X8 FAM155B-201ENST00000252338 4013 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
LINC00474Q9P2X8 B4GALT6-201ENST00000237019 2128 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
LINC00474Q9P2X8 ALPL-207ENST00000540617 2131 ntAPPRIS ALT2 TSL 2 BASIC9.35□□□□□ -0.91
LINC00474Q9P2X8 TMEM168-201ENST00000312814 7470 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
LINC00474Q9P2X8 MKL1-203ENST00000402042 4343 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
LINC00474Q9P2X8 WASHC2C-210ENST00000623400 4616 ntAPPRIS ALT2 TSL 1 (best) BASIC9.35□□□□□ -0.91
LINC00474Q9P2X8 AHCYP4-201ENST00000419201 1315 ntBASIC9.35□□□□□ -0.91
LINC00474Q9P2X8 RBP3-201ENST00000584701 4276 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
LINC00474Q9P2X8 MED12L-202ENST00000309237 2862 ntAPPRIS ALT2 TSL 2 BASIC9.35□□□□□ -0.91
LINC00474Q9P2X8 CATSPERE-201ENST00000366531 3038 ntAPPRIS ALT2 TSL 2 BASIC9.35□□□□□ -0.91
LINC00474Q9P2X8 TBC1D13-202ENST00000372648 3906 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
LINC00474Q9P2X8 TPM3-208ENST00000341485 2063 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
LINC00474Q9P2X8 AC009093.2-202ENST00000620513 2079 ntBASIC9.35□□□□□ -0.91
LINC00474Q9P2X8 MLF1-201ENST00000355893 2203 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
LINC00474Q9P2X8 SLCO2B1-203ENST00000428359 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC9.35□□□□□ -0.91
LINC00474Q9P2X8 AGAP4-208ENST00000618171 2387 ntTSL 5 BASIC9.35□□□□□ -0.91
LINC00474Q9P2X8 NR3C2-203ENST00000358102 5893 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
LINC00474Q9P2X8 TCAF2-205ENST00000444908 2976 ntTSL 5 BASIC9.35□□□□□ -0.91
LINC00474Q9P2X8 OSBPL5-201ENST00000263650 3889 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
LINC00474Q9P2X8 OR2B11-202ENST00000641149 6414 ntAPPRIS P1 BASIC9.35□□□□□ -0.91
LINC00474Q9P2X8 SFSWAP-201ENST00000261674 3246 ntAPPRIS P3 TSL 1 (best) BASIC9.35□□□□□ -0.91
LINC00474Q9P2X8 GCKR-201ENST00000264717 2186 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
LINC00474Q9P2X8 LCN9-201ENST00000277526 531 ntAPPRIS P2 TSL 5 BASIC9.35□□□□□ -0.91
LINC00474Q9P2X8 CSTB-201ENST00000291568 2164 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
LINC00474Q9P2X8 TDRD5-201ENST00000294848 3525 ntAPPRIS P3 TSL 1 (best) BASIC9.35□□□□□ -0.91
LINC00474Q9P2X8 ANKRD19P-201ENST00000338192 862 ntBASIC9.35□□□□□ -0.91
LINC00474Q9P2X8 CFLAR-203ENST00000341222 1283 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
LINC00474Q9P2X8 FOLR1-202ENST00000393676 996 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
LINC00474Q9P2X8 GTF2A2-204ENST00000396063 970 ntAPPRIS P1 TSL 2 BASIC9.35□□□□□ -0.91
LINC00474Q9P2X8 ZFAND2B-203ENST00000409206 1159 ntTSL 2 BASIC9.35□□□□□ -0.91
LINC00474Q9P2X8 HLA-DPA1-242ENST00000419277 1704 ntAPPRIS P2 BASIC9.35□□□□□ -0.91
LINC00474Q9P2X8 RPS2P32-201ENST00000439199 892 ntBASIC9.35□□□□□ -0.91
LINC00474Q9P2X8 AC010745.3-201ENST00000439745 415 ntTSL 3 BASIC9.35□□□□□ -0.91
LINC00474Q9P2X8 P4HA1-205ENST00000440381 2790 ntTSL 3 BASIC9.35□□□□□ -0.91
LINC00474Q9P2X8 PRICKLE1-203ENST00000455697 4277 ntAPPRIS P1 TSL 5 BASIC9.35□□□□□ -0.91
LINC00474Q9P2X8 NME2-204ENST00000503064 749 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
LINC00474Q9P2X8 STARD4-205ENST00000505803 803 ntAPPRIS P1 TSL 2 BASIC9.35□□□□□ -0.91
LINC00474Q9P2X8 STARD4-207ENST00000509887 1186 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
LINC00474Q9P2X8 AC090502.1-202ENST00000515416 966 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
LINC00474Q9P2X8 ANO1-AS1-201ENST00000524987 646 ntTSL 3 BASIC9.35□□□□□ -0.91
LINC00474Q9P2X8 AP003171.2-201ENST00000528208 925 ntBASIC9.35□□□□□ -0.91
LINC00474Q9P2X8 ANO1-AS2-202ENST00000533327 498 ntTSL 3 BASIC9.35□□□□□ -0.91
LINC00474Q9P2X8 SNX29P1-201ENST00000548357 1007 ntBASIC9.35□□□□□ -0.91
LINC00474Q9P2X8 AL583722.2-201ENST00000557223 663 ntTSL 3 BASIC9.35□□□□□ -0.91
LINC00474Q9P2X8 AC140658.4-201ENST00000561990 352 ntBASIC9.35□□□□□ -0.91
LINC00474Q9P2X8 JMJD8-203ENST00000562824 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC9.35□□□□□ -0.91
LINC00474Q9P2X8 SEPT9-233ENST00000590917 541 ntTSL 4 BASIC9.35□□□□□ -0.91
LINC00474Q9P2X8 TECR-207ENST00000596073 1170 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
LINC00474Q9P2X8 TECR-220ENST00000600083 1204 ntTSL 2 BASIC9.35□□□□□ -0.91
LINC00474Q9P2X8 LCN9-204ENST00000619315 528 ntAPPRIS ALT2 TSL 1 (best) BASIC9.35□□□□□ -0.91
LINC00474Q9P2X8 WNT11-204ENST00000621122 789 ntTSL 5 BASIC9.35□□□□□ -0.91
LINC00474Q9P2X8 AC093326.2-201ENST00000640770 729 ntTSL 5 BASIC9.35□□□□□ -0.91
LINC00474Q9P2X8 SPICE1-201ENST00000295872 5417 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
LINC00474Q9P2X8 CBX3-201ENST00000337620 2128 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
LINC00474Q9P2X8 GORASP1-201ENST00000319283 3722 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
LINC00474Q9P2X8 RAB37-216ENST00000613645 1653 ntAPPRIS ALT1 TSL 1 (best) BASIC9.35□□□□□ -0.91
LINC00474Q9P2X8 ZNF407-201ENST00000299687 7948 ntAPPRIS P3 TSL 1 (best) BASIC9.35□□□□□ -0.91
LINC00474Q9P2X8 CACNA1C-231ENST00000616390 2833 ntTSL 2 BASIC9.35□□□□□ -0.91
LINC00474Q9P2X8 PSMC3-209ENST00000530912 1390 ntTSL 5 BASIC9.35□□□□□ -0.91
Retrieved 100 of 98,524 protein–RNA pairs in 35.5 ms