Protein–RNA interactions for Protein: Q9BZI7

UPF3B, Regulator of nonsense transcripts 3B, humanhuman

Known RBP Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3BQ9BZI7 ADGRE3-204ENST00000595472 486 ntTSL 3 BASIC16.94■□□□□ 0.3
UPF3BQ9BZI7 LINC01726-201ENST00000624692 1253 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
UPF3BQ9BZI7 APOBEC3D-202ENST00000427494 1961 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
UPF3BQ9BZI7 AATBC-203ENST00000448247 1889 ntTSL 2 BASIC16.94■□□□□ 0.3
UPF3BQ9BZI7 TMEM9-204ENST00000367334 1529 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
UPF3BQ9BZI7 ASS1-203ENST00000372393 1548 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
UPF3BQ9BZI7 CNBP-208ENST00000504813 1549 ntAPPRIS ALT1 TSL 2 BASIC16.94■□□□□ 0.3
UPF3BQ9BZI7 PTPN13-203ENST00000427191 8487 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
UPF3BQ9BZI7 AC114271.1-201ENST00000612689 2813 ntBASIC16.94■□□□□ 0.3
UPF3BQ9BZI7 CACNA1C-231ENST00000616390 2833 ntTSL 2 BASIC16.94■□□□□ 0.3
UPF3BQ9BZI7 AC004623.1-201ENST00000624592 2127 ntBASIC16.94■□□□□ 0.3
UPF3BQ9BZI7 PANX2-202ENST00000395842 3051 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
UPF3BQ9BZI7 SNCAIP-222ENST00000542191 2729 ntTSL 5 BASIC16.94■□□□□ 0.3
UPF3BQ9BZI7 AC087386.2-201ENST00000623212 4637 ntBASIC16.94■□□□□ 0.3
UPF3BQ9BZI7 VPS52-212ENST00000445902 2960 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
UPF3BQ9BZI7 MEAF6-203ENST00000373074 2005 ntTSL 2 BASIC16.94■□□□□ 0.3
UPF3BQ9BZI7 UBE3A-209ENST00000625778 3217 ntTSL 5 BASIC16.94■□□□□ 0.3
UPF3BQ9BZI7 CFLAR-206ENST00000395148 4415 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
UPF3BQ9BZI7 PCDHB16-201ENST00000609684 5001 ntAPPRIS P1 BASIC16.94■□□□□ 0.3
UPF3BQ9BZI7 PITPNM2-201ENST00000280562 6785 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
UPF3BQ9BZI7 TMEM201-201ENST00000340305 3851 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
UPF3BQ9BZI7 SDF2-201ENST00000247020 1568 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
UPF3BQ9BZI7 TMEM25-201ENST00000313236 2409 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
UPF3BQ9BZI7 SNCA-204ENST00000394989 3167 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
UPF3BQ9BZI7 WDR81-205ENST00000437219 3184 ntTSL 2 BASIC16.93■□□□□ 0.3
UPF3BQ9BZI7 WASHC5-202ENST00000517845 3667 ntTSL 2 BASIC16.93■□□□□ 0.3
UPF3BQ9BZI7 NFATC1-205ENST00000427363 2832 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
UPF3BQ9BZI7 ABCF3-201ENST00000292808 2453 ntAPPRIS ALT1 TSL 2 BASIC16.93■□□□□ 0.3
UPF3BQ9BZI7 SEC14L3-204ENST00000403066 2474 ntTSL 2 BASIC16.93■□□□□ 0.3
UPF3BQ9BZI7 C10orf88-204ENST00000481909 2482 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
UPF3BQ9BZI7 LINC00841-201ENST00000451929 2126 ntTSL 2 BASIC16.93■□□□□ 0.3
UPF3BQ9BZI7 AC025594.2-201ENST00000609480 3902 ntAPPRIS P1 TSL 3 BASIC16.93■□□□□ 0.3
UPF3BQ9BZI7 AKIP1-201ENST00000299576 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
UPF3BQ9BZI7 CCL19-201ENST00000311925 687 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
UPF3BQ9BZI7 TSPO-201ENST00000329563 955 ntAPPRIS P1 TSL 3 BASIC16.93■□□□□ 0.3
UPF3BQ9BZI7 COX8C-201ENST00000342144 533 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
UPF3BQ9BZI7 JTB-202ENST00000356648 1040 ntTSL 2 BASIC16.93■□□□□ 0.3
UPF3BQ9BZI7 AL391119.1-201ENST00000416563 271 ntTSL 5 BASIC16.93■□□□□ 0.3
UPF3BQ9BZI7 Z93015.1-201ENST00000451718 390 ntBASIC16.93■□□□□ 0.3
UPF3BQ9BZI7 CCDC153-204ENST00000503566 1295 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
UPF3BQ9BZI7 HMGCLL1-208ENST00000508459 884 ntTSL 2 BASIC16.93■□□□□ 0.3
UPF3BQ9BZI7 UCHL1-207ENST00000508768 827 ntTSL 3 BASIC16.93■□□□□ 0.3
UPF3BQ9BZI7 HYAL3-206ENST00000513170 636 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
UPF3BQ9BZI7 AC006487.1-201ENST00000514506 1221 ntTSL 2 BASIC16.93■□□□□ 0.3
UPF3BQ9BZI7 ADIG-204ENST00000537425 770 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
UPF3BQ9BZI7 MIR3615-201ENST00000581999 87 ntBASIC16.93■□□□□ 0.3
UPF3BQ9BZI7 ZNF347-208ENST00000601804 496 ntTSL 4 BASIC16.93■□□□□ 0.3
UPF3BQ9BZI7 PPA1-206ENST00000625364 644 ntTSL 5 BASIC16.93■□□□□ 0.3
UPF3BQ9BZI7 NUDT16-202ENST00000521288 6108 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
UPF3BQ9BZI7 ODF2L-204ENST00000370566 2155 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
UPF3BQ9BZI7 GOSR2-235ENST00000640269 2190 ntTSL 5 BASIC16.93■□□□□ 0.3
UPF3BQ9BZI7 YIPF3-213ENST00000506469 1444 ntTSL 5 BASIC16.93■□□□□ 0.3
UPF3BQ9BZI7 SIGLEC12-203ENST00000598614 1434 ntTSL 5 BASIC16.93■□□□□ 0.3
UPF3BQ9BZI7 PIGV-202ENST00000374145 2713 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
UPF3BQ9BZI7 SSTR2-201ENST00000357585 7683 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
UPF3BQ9BZI7 ELN-209ENST00000380576 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
UPF3BQ9BZI7 KLHL32-206ENST00000544166 2864 ntTSL 2 BASIC16.93■□□□□ 0.3
UPF3BQ9BZI7 AC068888.1-207ENST00000546793 2863 ntTSL 2 BASIC16.93■□□□□ 0.3
UPF3BQ9BZI7 SLC16A1-201ENST00000369626 3910 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
UPF3BQ9BZI7 SLC43A3-214ENST00000529554 2207 ntAPPRIS P3 TSL 2 BASIC16.93■□□□□ 0.3
UPF3BQ9BZI7 CATSPERE-202ENST00000366533 3019 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
UPF3BQ9BZI7 PDK2-203ENST00000503176 3440 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
UPF3BQ9BZI7 TUBB4AP1-201ENST00000450755 1325 ntBASIC16.93■□□□□ 0.3
UPF3BQ9BZI7 CTSW-204ENST00000528419 1341 ntTSL 2 BASIC16.93■□□□□ 0.3
UPF3BQ9BZI7 HSD17B6-207ENST00000555805 1722 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
UPF3BQ9BZI7 C7orf65-201ENST00000408988 2911 ntTSL 2 BASIC16.93■□□□□ 0.3
UPF3BQ9BZI7 AXIN2-201ENST00000307078 4259 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
UPF3BQ9BZI7 AC007920.1-201ENST00000356133 2674 ntTSL 2 BASIC16.93■□□□□ 0.3
UPF3BQ9BZI7 RCC2P1-201ENST00000452257 1476 ntBASIC16.93■□□□□ 0.3
UPF3BQ9BZI7 SUSD5-201ENST00000309558 5008 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
UPF3BQ9BZI7 TACC3-212ENST00000612220 1756 ntTSL 5 BASIC16.92■□□□□ 0.3
UPF3BQ9BZI7 ARL10-201ENST00000310389 10845 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
UPF3BQ9BZI7 DSEL-201ENST00000310045 9531 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
UPF3BQ9BZI7 TNPO2-202ENST00000425528 5122 ntAPPRIS P4 TSL 5 BASIC16.92■□□□□ 0.3
UPF3BQ9BZI7 PCGF2-203ENST00000616129 1534 ntTSL 5 BASIC16.92■□□□□ 0.3
UPF3BQ9BZI7 BHLHE40-AS1-204ENST00000620618 2355 ntTSL 2 BASIC16.92■□□□□ 0.3
UPF3BQ9BZI7 AP1B1-201ENST00000317368 3903 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
UPF3BQ9BZI7 HMGA1-203ENST00000374116 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC16.92■□□□□ 0.3
UPF3BQ9BZI7 ACSM2A-209ENST00000573854 2837 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
UPF3BQ9BZI7 HIST1H2AJ-201ENST00000333151 387 ntAPPRIS P1 BASIC16.92■□□□□ 0.3
UPF3BQ9BZI7 SH3BGR-201ENST00000333634 1251 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
UPF3BQ9BZI7 BEX5-201ENST00000333643 857 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
UPF3BQ9BZI7 AL138767.1-201ENST00000354527 744 ntTSL 3 BASIC16.92■□□□□ 0.3
UPF3BQ9BZI7 IL1RAPL2-202ENST00000372582 2985 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
UPF3BQ9BZI7 GTF2A2-204ENST00000396063 970 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
UPF3BQ9BZI7 GTF2A2-205ENST00000396064 633 ntTSL 3 BASIC16.92■□□□□ 0.3
UPF3BQ9BZI7 HMGA1P1-201ENST00000415560 1062 ntBASIC16.92■□□□□ 0.3
UPF3BQ9BZI7 HNRNPA1P63-201ENST00000427917 963 ntBASIC16.92■□□□□ 0.3
UPF3BQ9BZI7 XBP1P1-201ENST00000436573 652 ntBASIC16.92■□□□□ 0.3
UPF3BQ9BZI7 TSPEAR-AS1-202ENST00000451035 2108 ntTSL 5 BASIC16.92■□□□□ 0.3
UPF3BQ9BZI7 RPL13AP20-201ENST00000459725 609 ntBASIC16.92■□□□□ 0.3
UPF3BQ9BZI7 GTF2A2-208ENST00000484743 408 ntTSL 2 BASIC16.92■□□□□ 0.3
UPF3BQ9BZI7 PPP1R32-205ENST00000538185 1107 ntTSL 2 BASIC16.92■□□□□ 0.3
UPF3BQ9BZI7 AL132709.1-203ENST00000555103 569 ntTSL 4 BASIC16.92■□□□□ 0.3
UPF3BQ9BZI7 RHOQP1-201ENST00000555758 579 ntBASIC16.92■□□□□ 0.3
UPF3BQ9BZI7 AC099811.3-201ENST00000586351 425 ntTSL 3 BASIC16.92■□□□□ 0.3
UPF3BQ9BZI7 AC006453.2-202ENST00000635968 827 ntTSL 5 BASIC16.92■□□□□ 0.3
UPF3BQ9BZI7 SERPINH1-205ENST00000525876 2283 ntTSL 2 BASIC16.92■□□□□ 0.3
UPF3BQ9BZI7 AL669831.1-201ENST00000506640 6432 ntTSL 5 BASIC16.92■□□□□ 0.3
UPF3BQ9BZI7 CHIT1-201ENST00000255427 1598 ntTSL 2 BASIC16.92■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 70.7 ms