Protein–RNA interactions for Protein: Q9BWH6

RPAP1, RNA polymerase II-associated protein 1, humanhuman

Predicted RBP Predictions only

Length 1,393 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPAP1Q9BWH6 AC011481.2-201ENST00000585408 426 ntTSL 3 BASIC17.07■□□□□ 0.32
RPAP1Q9BWH6 ZNF528-AS1-202ENST00000596746 929 ntTSL 5 BASIC17.07■□□□□ 0.32
RPAP1Q9BWH6 SNRPA1-216ENST00000626000 539 ntTSL 5 BASIC17.07■□□□□ 0.32
RPAP1Q9BWH6 TRIM24-201ENST00000343526 8410 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
RPAP1Q9BWH6 GRIN1-206ENST00000371559 3577 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
RPAP1Q9BWH6 GRIK4-208ENST00000638419 3593 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
RPAP1Q9BWH6 C9orf3-202ENST00000297979 2820 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
RPAP1Q9BWH6 CREBBP-201ENST00000262367 10803 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
RPAP1Q9BWH6 MBNL1-202ENST00000282488 6458 ntTSL 5 BASIC17.07■□□□□ 0.32
RPAP1Q9BWH6 ATP6V0A4-201ENST00000310018 3135 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
RPAP1Q9BWH6 FAM208A-201ENST00000355628 5239 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
RPAP1Q9BWH6 NBPF3-205ENST00000454000 2133 ntAPPRIS ALT2 TSL 2 BASIC17.07■□□□□ 0.32
RPAP1Q9BWH6 USP39-220ENST00000613444 2161 ntTSL 2 BASIC17.07■□□□□ 0.32
RPAP1Q9BWH6 TNR-201ENST00000263525 5190 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
RPAP1Q9BWH6 CENPBD1-201ENST00000314994 2744 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
RPAP1Q9BWH6 CAB39-201ENST00000258418 3826 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
RPAP1Q9BWH6 CYB561D1-201ENST00000310611 5009 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
RPAP1Q9BWH6 BARX1-AS1-201ENST00000453045 1445 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
RPAP1Q9BWH6 NOB1-201ENST00000268802 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
RPAP1Q9BWH6 CETP-203ENST00000566128 1733 ntTSL 5 BASIC17.07■□□□□ 0.32
RPAP1Q9BWH6 LINC01725-203ENST00000417975 3177 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
RPAP1Q9BWH6 ADGRE2-208ENST00000595839 2046 ntTSL 5 BASIC17.07■□□□□ 0.32
RPAP1Q9BWH6 ABCC6P1-201ENST00000546162 2943 ntTSL 2 BASIC17.07■□□□□ 0.32
RPAP1Q9BWH6 RPL13AP3-202ENST00000494676 1473 ntBASIC17.06■□□□□ 0.32
RPAP1Q9BWH6 POLN-210ENST00000511885 3253 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
RPAP1Q9BWH6 CGN-201ENST00000271636 5091 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
RPAP1Q9BWH6 PPP1R16B-201ENST00000299824 6251 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
RPAP1Q9BWH6 RARS2-201ENST00000369536 1818 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
RPAP1Q9BWH6 ADPRH-205ENST00000478927 1501 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
RPAP1Q9BWH6 PCDHA3-202ENST00000532566 4594 ntBASIC17.06■□□□□ 0.32
RPAP1Q9BWH6 TMEM87A-201ENST00000307216 1598 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
RPAP1Q9BWH6 DNAJB6-201ENST00000262177 2527 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
RPAP1Q9BWH6 BGLAP-201ENST00000368272 732 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
RPAP1Q9BWH6 LINC00028-201ENST00000435497 587 ntTSL 2 BASIC17.06■□□□□ 0.32
RPAP1Q9BWH6 SGO1-AS1-201ENST00000441442 499 ntTSL 4 BASIC17.06■□□□□ 0.32
RPAP1Q9BWH6 ZAP70-202ENST00000451498 1085 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
RPAP1Q9BWH6 SNCB-203ENST00000506696 552 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
RPAP1Q9BWH6 MAX-218ENST00000557746 571 ntTSL 4 BASIC17.06■□□□□ 0.32
RPAP1Q9BWH6 AC092139.2-201ENST00000563750 754 ntTSL 3 BASIC17.06■□□□□ 0.32
RPAP1Q9BWH6 UPF3AP2-202ENST00000578315 730 ntTSL 5 BASIC17.06■□□□□ 0.32
RPAP1Q9BWH6 AC010422.5-201ENST00000597961 585 ntAPPRIS P1 TSL 4 BASIC17.06■□□□□ 0.32
RPAP1Q9BWH6 PTPN9-201ENST00000306726 3862 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
RPAP1Q9BWH6 PIEZO1-201ENST00000301015 8072 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
RPAP1Q9BWH6 CEP128-201ENST00000216517 1606 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
RPAP1Q9BWH6 ZBTB7C-204ENST00000586438 4899 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
RPAP1Q9BWH6 AC099521.3-201ENST00000624251 2938 ntBASIC17.06■□□□□ 0.32
RPAP1Q9BWH6 ZNF581-203ENST00000587252 1324 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
RPAP1Q9BWH6 AL359183.1-201ENST00000623796 2132 ntBASIC17.06■□□□□ 0.32
RPAP1Q9BWH6 TIMP3-201ENST00000266085 4603 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
RPAP1Q9BWH6 PPP1R1B-202ENST00000394265 1419 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
RPAP1Q9BWH6 GRIN2A-201ENST00000330684 5031 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
RPAP1Q9BWH6 DNER-201ENST00000341772 3260 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
RPAP1Q9BWH6 BRD7P5-201ENST00000299197 1822 ntBASIC17.06■□□□□ 0.32
RPAP1Q9BWH6 PTBP1-221ENST00000635647 3691 ntTSL 5 BASIC17.06■□□□□ 0.32
RPAP1Q9BWH6 ACTL7A-201ENST00000333999 1494 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
RPAP1Q9BWH6 TRAPPC11-202ENST00000357207 4435 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
RPAP1Q9BWH6 LIMS4-204ENST00000632897 1460 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
RPAP1Q9BWH6 TMPRSS9-201ENST00000332578 3331 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
RPAP1Q9BWH6 AC073548.1-201ENST00000624088 1882 ntBASIC17.06■□□□□ 0.32
RPAP1Q9BWH6 TCN2-202ENST00000405742 1936 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
RPAP1Q9BWH6 FAM149B1-201ENST00000242505 5408 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
RPAP1Q9BWH6 OPRL1-203ENST00000355631 3147 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
RPAP1Q9BWH6 GLG1-201ENST00000205061 8261 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
RPAP1Q9BWH6 AC027612.1-201ENST00000445234 2395 ntBASIC17.05■□□□□ 0.32
RPAP1Q9BWH6 CERKL-206ENST00000410087 3208 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
RPAP1Q9BWH6 CTCFL-205ENST00000423479 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
RPAP1Q9BWH6 USP39-207ENST00000450066 2086 ntTSL 2 BASIC17.05■□□□□ 0.32
RPAP1Q9BWH6 IL9RP3-201ENST00000442856 1674 ntBASIC17.05■□□□□ 0.32
RPAP1Q9BWH6 SNX19-213ENST00000534726 1656 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
RPAP1Q9BWH6 ASB15-207ENST00000540573 1651 ntTSL 2 BASIC17.05■□□□□ 0.32
RPAP1Q9BWH6 FGFR1-201ENST00000326324 3816 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
RPAP1Q9BWH6 CMTM5-202ENST00000342473 725 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
RPAP1Q9BWH6 CHCHD2-201ENST00000395422 901 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
RPAP1Q9BWH6 CMTM5-205ENST00000397227 818 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
RPAP1Q9BWH6 NDUFS7-203ENST00000414651 841 ntTSL 5 BASIC17.05■□□□□ 0.32
RPAP1Q9BWH6 NUBP1-202ENST00000433392 1185 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
RPAP1Q9BWH6 AC013448.2-201ENST00000440341 787 ntTSL 5 BASIC17.05■□□□□ 0.32
RPAP1Q9BWH6 RPS23-204ENST00000507980 836 ntTSL 2 BASIC17.05■□□□□ 0.32
RPAP1Q9BWH6 ALG1L13P-204ENST00000523017 765 ntTSL 5 BASIC17.05■□□□□ 0.32
RPAP1Q9BWH6 CMTM5-208ENST00000555731 831 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
RPAP1Q9BWH6 AL355916.2-201ENST00000556543 593 ntTSL 4 BASIC17.05■□□□□ 0.32
RPAP1Q9BWH6 AC090825.1-202ENST00000560059 665 ntTSL 3 BASIC17.05■□□□□ 0.32
RPAP1Q9BWH6 AC020659.1-202ENST00000564432 531 ntTSL 5 BASIC17.05■□□□□ 0.32
RPAP1Q9BWH6 DCTPP1-202ENST00000565758 749 ntTSL 3 BASIC17.05■□□□□ 0.32
RPAP1Q9BWH6 SPINT2-204ENST00000587090 1246 ntAPPRIS ALT2 TSL 3 BASIC17.05■□□□□ 0.32
RPAP1Q9BWH6 AC127024.7-201ENST00000625101 200 ntBASIC17.05■□□□□ 0.32
RPAP1Q9BWH6 TRMT2B-203ENST00000372939 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
RPAP1Q9BWH6 FLAD1-206ENST00000368432 1839 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
RPAP1Q9BWH6 LGALS12-204ENST00000415491 1816 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
RPAP1Q9BWH6 PCNA-202ENST00000379160 1359 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
RPAP1Q9BWH6 CDT1-201ENST00000301019 3240 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
RPAP1Q9BWH6 EGLN1-201ENST00000366641 7097 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
RPAP1Q9BWH6 CR382287.2-201ENST00000623370 1942 ntTSL 2 BASIC17.05■□□□□ 0.32
RPAP1Q9BWH6 ZNF576-202ENST00000391965 1468 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
RPAP1Q9BWH6 LDHAL6A-201ENST00000280706 2526 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
RPAP1Q9BWH6 FAM96A-203ENST00000557835 1536 ntTSL 2 BASIC17.05■□□□□ 0.32
RPAP1Q9BWH6 TGFBR2-202ENST00000359013 4605 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
RPAP1Q9BWH6 RARG-202ENST00000394426 2640 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
RPAP1Q9BWH6 CNGA3-204ENST00000409937 2615 ntAPPRIS ALT2 TSL 2 BASIC17.05■□□□□ 0.32
RPAP1Q9BWH6 TRPV4-202ENST00000418703 3247 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 64.9 ms