Protein–RNA interactions for Protein: Q8TCU4

ALMS1, Alstrom syndrome protein 1, humanhuman

Predictions only

Length 4,167 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALMS1Q8TCU4 GGT1-202ENST00000400380 2540 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
ALMS1Q8TCU4 COMP-201ENST00000222271 2461 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
ALMS1Q8TCU4 BX088651.4-202ENST00000428895 1479 ntTSL 1 (best) BASIC9.1□□□□□ -0.95
ALMS1Q8TCU4 AL590399.1-202ENST00000429818 1480 ntTSL 1 (best) BASIC9.1□□□□□ -0.95
ALMS1Q8TCU4 AL512625.1-202ENST00000476224 1480 ntTSL 1 (best) BASIC9.1□□□□□ -0.95
ALMS1Q8TCU4 COL25A1-203ENST00000399132 2724 ntAPPRIS P4 TSL 5 BASIC9.1□□□□□ -0.95
ALMS1Q8TCU4 GLIPR1L2-204ENST00000550916 2609 ntAPPRIS ALT2 TSL 1 (best) BASIC9.1□□□□□ -0.95
ALMS1Q8TCU4 CHMP5-202ENST00000419016 1957 ntTSL 2 BASIC9.1□□□□□ -0.95
ALMS1Q8TCU4 ANKMY1-207ENST00000403283 2874 ntTSL 1 (best) BASIC9.1□□□□□ -0.95
ALMS1Q8TCU4 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC9.1□□□□□ -0.95
ALMS1Q8TCU4 AL669918.1-201ENST00000452392 2705 ntAPPRIS P1 TSL 2 BASIC9.1□□□□□ -0.95
ALMS1Q8TCU4 GZMH-201ENST00000216338 909 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
ALMS1Q8TCU4 ZNF684-201ENST00000372696 1009 ntTSL 3 BASIC9.1□□□□□ -0.95
ALMS1Q8TCU4 AC005822.1-201ENST00000414124 1034 ntBASIC9.1□□□□□ -0.95
ALMS1Q8TCU4 GAPDHP29-201ENST00000429913 985 ntBASIC9.1□□□□□ -0.95
ALMS1Q8TCU4 RASGRF2-AS1-202ENST00000505694 535 ntTSL 3 BASIC9.1□□□□□ -0.95
ALMS1Q8TCU4 HNRNPA1P7-201ENST00000521273 963 ntBASIC9.1□□□□□ -0.95
ALMS1Q8TCU4 BBOX1-AS1-203ENST00000530430 879 ntTSL 4 BASIC9.1□□□□□ -0.95
ALMS1Q8TCU4 BBOX1-AS1-204ENST00000531363 745 ntTSL 2 BASIC9.1□□□□□ -0.95
ALMS1Q8TCU4 BCDIN3D-AS1-202ENST00000549124 468 ntTSL 3 BASIC9.1□□□□□ -0.95
ALMS1Q8TCU4 EIF5A-207ENST00000572815 811 ntTSL 5 BASIC9.1□□□□□ -0.95
ALMS1Q8TCU4 AC211476.2-201ENST00000608799 708 ntBASIC9.1□□□□□ -0.95
ALMS1Q8TCU4 RN7SL238P-201ENST00000613832 290 ntBASIC9.1□□□□□ -0.95
ALMS1Q8TCU4 Metazoa_SRP.139-201ENST00000616096 290 ntBASIC9.1□□□□□ -0.95
ALMS1Q8TCU4 RN7SL106P-201ENST00000618104 290 ntBASIC9.1□□□□□ -0.95
ALMS1Q8TCU4 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC9.1□□□□□ -0.95
ALMS1Q8TCU4 ZNF219-202ENST00000421093 2908 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
ALMS1Q8TCU4 GBA2-203ENST00000378103 3611 ntAPPRIS P3 TSL 1 (best) BASIC9.1□□□□□ -0.95
ALMS1Q8TCU4 CCDC159-209ENST00000588790 1408 ntAPPRIS P1 TSL 5 BASIC9.1□□□□□ -0.95
ALMS1Q8TCU4 ZNF34-201ENST00000343459 1901 ntAPPRIS P3 TSL 1 (best) BASIC9.1□□□□□ -0.95
ALMS1Q8TCU4 ZNF34-202ENST00000429371 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC9.1□□□□□ -0.95
ALMS1Q8TCU4 USP35-204ENST00000530267 2419 ntTSL 2 BASIC9.1□□□□□ -0.95
ALMS1Q8TCU4 GARS-201ENST00000389266 2634 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
ALMS1Q8TCU4 COASY-202ENST00000421097 2071 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
ALMS1Q8TCU4 TUBB8P4-201ENST00000511806 1324 ntBASIC9.1□□□□□ -0.95
ALMS1Q8TCU4 SIPA1-203ENST00000527525 3235 ntTSL 2 BASIC9.09□□□□□ -0.95
ALMS1Q8TCU4 AC139795.2-201ENST00000499900 1751 ntTSL 2 BASIC9.09□□□□□ -0.95
ALMS1Q8TCU4 MED29-204ENST00000599213 2490 ntAPPRIS ALT2 TSL 1 (best) BASIC9.09□□□□□ -0.95
ALMS1Q8TCU4 SLC46A3-201ENST00000266943 3173 ntAPPRIS P3 TSL 1 (best) BASIC9.09□□□□□ -0.95
ALMS1Q8TCU4 AC010677.1-201ENST00000441690 412 ntBASIC9.09□□□□□ -0.95
ALMS1Q8TCU4 MTHFD2P7-201ENST00000483867 983 ntBASIC9.09□□□□□ -0.95
ALMS1Q8TCU4 IGHV3OR16-11-201ENST00000565524 349 ntBASIC9.09□□□□□ -0.95
ALMS1Q8TCU4 FAM90A28P-201ENST00000596881 489 ntTSL 5 BASIC9.09□□□□□ -0.95
ALMS1Q8TCU4 AC104521.1-201ENST00000598582 279 ntTSL 5 BASIC9.09□□□□□ -0.95
ALMS1Q8TCU4 AL356583.1-201ENST00000398739 1371 ntBASIC9.09□□□□□ -0.95
ALMS1Q8TCU4 AC004922.1-201ENST00000638617 2430 ntAPPRIS P1 TSL 5 BASIC9.09□□□□□ -0.95
ALMS1Q8TCU4 DBET-201ENST00000630918 3363 ntBASIC9.09□□□□□ -0.95
ALMS1Q8TCU4 SMAD2-212ENST00000591214 1714 ntTSL 2 BASIC9.09□□□□□ -0.95
ALMS1Q8TCU4 F2RL1-201ENST00000296677 2914 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
ALMS1Q8TCU4 MYADML2-201ENST00000409745 2452 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
ALMS1Q8TCU4 AP000787.1-205ENST00000536683 1485 ntTSL 5 BASIC9.09□□□□□ -0.95
ALMS1Q8TCU4 OR2V2-201ENST00000328275 948 ntAPPRIS P1 BASIC9.09□□□□□ -0.95
ALMS1Q8TCU4 TPI1P3-201ENST00000335020 740 ntBASIC9.09□□□□□ -0.95
ALMS1Q8TCU4 TUBB8P9-201ENST00000422534 1276 ntBASIC9.09□□□□□ -0.95
ALMS1Q8TCU4 TUBB8P10-201ENST00000430210 1279 ntBASIC9.09□□□□□ -0.95
ALMS1Q8TCU4 LINC01664-202ENST00000441544 1175 ntTSL 1 (best) BASIC9.09□□□□□ -0.95
ALMS1Q8TCU4 COL18A1-AS2-201ENST00000446475 552 ntTSL 4 BASIC9.09□□□□□ -0.95
ALMS1Q8TCU4 VEGFA-210ENST00000457104 414 ntTSL 1 (best) BASIC9.09□□□□□ -0.95
ALMS1Q8TCU4 VEGFA-218ENST00000518689 630 ntTSL 1 (best) BASIC9.09□□□□□ -0.95
ALMS1Q8TCU4 VEGFA-223ENST00000523125 541 ntAPPRIS ALT2 TSL 1 (best) BASIC9.09□□□□□ -0.95
ALMS1Q8TCU4 LINC00677-201ENST00000558224 486 ntTSL 3 BASIC9.09□□□□□ -0.95
ALMS1Q8TCU4 AC005096.1-201ENST00000560499 622 ntTSL 3 BASIC9.09□□□□□ -0.95
ALMS1Q8TCU4 AC010551.3-201ENST00000563772 463 ntTSL 5 BASIC9.09□□□□□ -0.95
ALMS1Q8TCU4 SNAPC5-207ENST00000566658 574 ntAPPRIS ALT2 TSL 4 BASIC9.09□□□□□ -0.95
ALMS1Q8TCU4 AC104423.1-201ENST00000591742 728 ntTSL 3 BASIC9.09□□□□□ -0.95
ALMS1Q8TCU4 AC116036.2-201ENST00000607592 462 ntBASIC9.09□□□□□ -0.95
ALMS1Q8TCU4 TBPL2-201ENST00000247219 2037 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
ALMS1Q8TCU4 GPR84-202ENST00000551809 2041 ntAPPRIS P1 BASIC9.09□□□□□ -0.95
ALMS1Q8TCU4 KIFC3-205ENST00000540079 2781 ntTSL 2 BASIC9.09□□□□□ -0.95
ALMS1Q8TCU4 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
ALMS1Q8TCU4 DPP6-205ENST00000427557 2388 ntTSL 2 BASIC9.09□□□□□ -0.95
ALMS1Q8TCU4 GDF9-201ENST00000296875 1796 ntTSL 5 BASIC9.09□□□□□ -0.95
ALMS1Q8TCU4 SC5D-201ENST00000264027 2456 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
ALMS1Q8TCU4 TKT-201ENST00000296289 1931 ntTSL 5 BASIC9.09□□□□□ -0.95
ALMS1Q8TCU4 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
ALMS1Q8TCU4 AP001267.2-201ENST00000532619 2086 ntBASIC9.09□□□□□ -0.95
ALMS1Q8TCU4 SH2D3C-206ENST00000429553 2794 ntTSL 1 (best) BASIC9.09□□□□□ -0.95
ALMS1Q8TCU4 MAP3K11-201ENST00000309100 3566 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
ALMS1Q8TCU4 CPPED1-203ENST00000433677 1993 ntTSL 1 (best) BASIC9.09□□□□□ -0.95
ALMS1Q8TCU4 SPACA7-201ENST00000283550 795 ntAPPRIS P2 TSL 1 (best) BASIC9.09□□□□□ -0.95
ALMS1Q8TCU4 TPT1-201ENST00000309246 1008 ntTSL 1 (best) BASIC9.09□□□□□ -0.95
ALMS1Q8TCU4 MRPL19-203ENST00000409374 1076 ntAPPRIS P1 TSL 5 BASIC9.09□□□□□ -0.95
ALMS1Q8TCU4 AP000343.1-201ENST00000440602 385 ntBASIC9.09□□□□□ -0.95
ALMS1Q8TCU4 RPS23-205ENST00000510019 1019 ntTSL 4 BASIC9.09□□□□□ -0.95
ALMS1Q8TCU4 SLC10A7-208ENST00000511374 869 ntTSL 1 (best) BASIC9.09□□□□□ -0.95
ALMS1Q8TCU4 GABARAPL1-203ENST00000535576 792 ntTSL 5 BASIC9.09□□□□□ -0.95
ALMS1Q8TCU4 ATP2A2-211ENST00000552636 529 ntTSL 4 BASIC9.09□□□□□ -0.95
ALMS1Q8TCU4 AC090825.2-201ENST00000557959 739 ntBASIC9.09□□□□□ -0.95
ALMS1Q8TCU4 CYP4F22-201ENST00000269703 2641 ntAPPRIS P1 TSL 2 BASIC9.09□□□□□ -0.95
ALMS1Q8TCU4 TFAP2A-213ENST00000482890 2071 ntAPPRIS P3 TSL 5 BASIC9.09□□□□□ -0.95
ALMS1Q8TCU4 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC9.09□□□□□ -0.95
ALMS1Q8TCU4 KRT26-201ENST00000335552 1733 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
ALMS1Q8TCU4 ACVR1B-206ENST00000542485 2362 ntTSL 2 BASIC9.09□□□□□ -0.95
ALMS1Q8TCU4 SGK3-208ENST00000521198 3306 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
ALMS1Q8TCU4 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
ALMS1Q8TCU4 LINC02396-202ENST00000550636 2324 ntTSL 2 BASIC9.09□□□□□ -0.95
ALMS1Q8TCU4 RAP2A-201ENST00000245304 5487 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
ALMS1Q8TCU4 NUP93-201ENST00000308159 2741 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
ALMS1Q8TCU4 PHTF1-202ENST00000369598 3000 ntTSL 5 BASIC9.09□□□□□ -0.95
ALMS1Q8TCU4 HIPK4-201ENST00000291823 2452 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.96
Retrieved 100 of 98,524 protein–RNA pairs in 35.7 ms