Protein–RNA interactions for Protein: Q8NFU0

BEST4, Bestrophin-4, humanhuman

Predictions only

Length 473 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST4Q8NFU0 AL442647.2-201ENST00000429864 857 ntBASIC12.3□□□□□ -0.44
BEST4Q8NFU0 CDRT15-202ENST00000431716 655 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
BEST4Q8NFU0 SLC25A36-204ENST00000453248 1040 ntTSL 2 BASIC12.3□□□□□ -0.44
BEST4Q8NFU0 S100A14-206ENST00000476873 1025 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
BEST4Q8NFU0 TIMM8B-201ENST00000504148 819 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
BEST4Q8NFU0 SERF1B-208ENST00000515588 792 ntTSL 2 BASIC12.3□□□□□ -0.44
BEST4Q8NFU0 GFRA2-202ENST00000517328 2104 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
BEST4Q8NFU0 AC009902.2-201ENST00000518880 620 ntTSL 4 BASIC12.3□□□□□ -0.44
BEST4Q8NFU0 AC124067.2-201ENST00000521989 510 ntTSL 2 BASIC12.3□□□□□ -0.44
BEST4Q8NFU0 AC124283.3-201ENST00000570869 594 ntBASIC12.3□□□□□ -0.44
BEST4Q8NFU0 AC008805.2-201ENST00000590069 435 ntTSL 5 BASIC12.3□□□□□ -0.44
BEST4Q8NFU0 AC011466.1-201ENST00000595201 566 ntTSL 4 BASIC12.3□□□□□ -0.44
BEST4Q8NFU0 NDUFS7-218ENST00000618074 688 ntTSL 5 BASIC12.3□□□□□ -0.44
BEST4Q8NFU0 AC015819.2-201ENST00000618730 555 ntTSL 3 BASIC12.3□□□□□ -0.44
BEST4Q8NFU0 NDUFS7-219ENST00000620479 754 ntTSL 5 BASIC12.3□□□□□ -0.44
BEST4Q8NFU0 SCNN1B-202ENST00000343070 2597 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
BEST4Q8NFU0 ZNF799-202ENST00000430385 2583 ntAPPRIS P1 TSL 2 BASIC12.3□□□□□ -0.44
BEST4Q8NFU0 TLE3-203ENST00000451782 2356 ntAPPRIS ALT1 TSL 5 BASIC12.3□□□□□ -0.44
BEST4Q8NFU0 NOP2-212ENST00000541778 3038 ntTSL 2 BASIC12.3□□□□□ -0.44
BEST4Q8NFU0 ST3GAL2-202ENST00000393640 8872 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
BEST4Q8NFU0 LDLRAD3-202ENST00000524419 1996 ntTSL 5 BASIC12.3□□□□□ -0.44
BEST4Q8NFU0 ZDHHC8-201ENST00000320602 3072 ntTSL 5 BASIC12.3□□□□□ -0.44
BEST4Q8NFU0 SNRNP27-202ENST00000409116 1339 ntTSL 5 BASIC12.3□□□□□ -0.44
BEST4Q8NFU0 AC064801.2-201ENST00000625052 1303 ntBASIC12.3□□□□□ -0.44
BEST4Q8NFU0 SH3PXD2B-201ENST00000311601 7777 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
BEST4Q8NFU0 IFT172-202ENST00000359466 2207 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
BEST4Q8NFU0 PPME1-201ENST00000328257 2677 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
BEST4Q8NFU0 GNAS-214ENST00000371100 4029 ntTSL 5 BASIC12.3□□□□□ -0.44
BEST4Q8NFU0 CDK3-201ENST00000425876 1582 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
BEST4Q8NFU0 CDK3-202ENST00000448471 1570 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
BEST4Q8NFU0 TMCO5B-204ENST00000529696 1568 ntTSL 2 BASIC12.3□□□□□ -0.44
BEST4Q8NFU0 AL590440.2-201ENST00000641973 1595 ntBASIC12.3□□□□□ -0.44
BEST4Q8NFU0 MAGED1-201ENST00000326587 2747 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
BEST4Q8NFU0 ALKBH5-201ENST00000399138 2748 ntAPPRIS P1 TSL 2 BASIC12.3□□□□□ -0.44
BEST4Q8NFU0 LCMT1-203ENST00000399069 1368 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
BEST4Q8NFU0 RAB37-203ENST00000392612 2528 ntTSL 2 BASIC12.3□□□□□ -0.44
BEST4Q8NFU0 AC009501.1-201ENST00000429952 2069 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
BEST4Q8NFU0 PRC1-204ENST00000442656 2060 ntTSL 2 BASIC12.3□□□□□ -0.44
BEST4Q8NFU0 DGKA-202ENST00000394147 2770 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
BEST4Q8NFU0 TLL2-201ENST00000357947 6756 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
BEST4Q8NFU0 GFI1B-207ENST00000636137 1870 ntTSL 5 BASIC12.29□□□□□ -0.44
BEST4Q8NFU0 ATE1-208ENST00000540606 5165 ntTSL 2 BASIC12.29□□□□□ -0.44
BEST4Q8NFU0 NALCN-AS1-201ENST00000457843 2846 ntTSL 2 BASIC12.29□□□□□ -0.44
BEST4Q8NFU0 HK3-201ENST00000292432 3066 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
BEST4Q8NFU0 OCA2-201ENST00000353809 3068 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
BEST4Q8NFU0 USP22-206ENST00000537526 4976 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
BEST4Q8NFU0 GSTM4-204ENST00000369836 1412 ntAPPRIS P2 TSL 1 (best) BASIC12.29□□□□□ -0.44
BEST4Q8NFU0 SELENOS-201ENST00000398226 1439 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
BEST4Q8NFU0 PACSIN1-207ENST00000620693 4299 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
BEST4Q8NFU0 LINC00094-204ENST00000599836 1689 ntAPPRIS P5 BASIC12.29□□□□□ -0.44
BEST4Q8NFU0 SLC13A4-201ENST00000354042 2897 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
BEST4Q8NFU0 TECTA-201ENST00000264037 6468 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
BEST4Q8NFU0 AL357143.1-202ENST00000640531 5777 ntTSL 5 BASIC12.29□□□□□ -0.44
BEST4Q8NFU0 PDCD6IPP2-206ENST00000566178 3351 ntTSL 5 BASIC12.29□□□□□ -0.44
BEST4Q8NFU0 FGFRL1-202ENST00000398484 3639 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
BEST4Q8NFU0 DNMT3B-205ENST00000443239 2674 ntTSL 2 BASIC12.29□□□□□ -0.44
BEST4Q8NFU0 DGKZ-216ENST00000528615 2692 ntTSL 5 BASIC12.29□□□□□ -0.44
BEST4Q8NFU0 DLGAP1-AS1-201ENST00000317114 1966 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
BEST4Q8NFU0 SIX1-203ENST00000554986 1959 ntTSL 3 BASIC12.29□□□□□ -0.44
BEST4Q8NFU0 LANCL1-205ENST00000443314 4781 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
BEST4Q8NFU0 ILF3-201ENST00000250241 3035 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
BEST4Q8NFU0 AC010547.1-201ENST00000500612 2793 ntTSL 2 BASIC12.29□□□□□ -0.44
BEST4Q8NFU0 CNKSR3-204ENST00000479339 2023 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
BEST4Q8NFU0 H2BFWT-201ENST00000217926 894 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
BEST4Q8NFU0 CD79A-201ENST00000221972 1258 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
BEST4Q8NFU0 OR10H1-201ENST00000334920 1124 ntAPPRIS P1 BASIC12.29□□□□□ -0.44
BEST4Q8NFU0 CTRB1-201ENST00000361017 858 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
BEST4Q8NFU0 NTMT1-201ENST00000372480 852 ntAPPRIS P1 TSL 3 BASIC12.29□□□□□ -0.44
BEST4Q8NFU0 AC012640.1-201ENST00000509915 688 ntTSL 3 BASIC12.29□□□□□ -0.44
BEST4Q8NFU0 ARL2-204ENST00000529384 830 ntAPPRIS P1 TSL 3 BASIC12.29□□□□□ -0.44
BEST4Q8NFU0 ST8SIA2-202ENST00000539113 1089 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
BEST4Q8NFU0 AC138028.3-201ENST00000561699 213 ntTSL 3 BASIC12.29□□□□□ -0.44
BEST4Q8NFU0 GLIS2-AS1-201ENST00000576080 340 ntTSL 2 BASIC12.29□□□□□ -0.44
BEST4Q8NFU0 AC138696.2-201ENST00000607376 223 ntBASIC12.29□□□□□ -0.44
BEST4Q8NFU0 AL390754.1-201ENST00000619088 582 ntBASIC12.29□□□□□ -0.44
BEST4Q8NFU0 BCL2L1-203ENST00000376062 2578 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
BEST4Q8NFU0 KCNIP1-208ENST00000520740 1845 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
BEST4Q8NFU0 ADAMTSL4-202ENST00000369038 4167 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
BEST4Q8NFU0 ACTN4-203ENST00000424234 1566 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
BEST4Q8NFU0 NAALADL1-201ENST00000340252 2376 ntTSL 5 BASIC12.29□□□□□ -0.44
BEST4Q8NFU0 BCL2L1-202ENST00000376055 2383 ntTSL 2 BASIC12.29□□□□□ -0.44
BEST4Q8NFU0 DLL1-201ENST00000366756 3174 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
BEST4Q8NFU0 CYP2J2-201ENST00000371204 1896 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
BEST4Q8NFU0 FGF10-AS1-201ENST00000502457 1894 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
BEST4Q8NFU0 FERMT2-202ENST00000343279 3247 ntTSL 5 BASIC12.29□□□□□ -0.44
BEST4Q8NFU0 COL1A1-201ENST00000225964 6727 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
BEST4Q8NFU0 AGAP5-202ENST00000443782 2430 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
BEST4Q8NFU0 AGAP4-203ENST00000448048 2439 ntAPPRIS P2 TSL 1 (best) BASIC12.29□□□□□ -0.44
BEST4Q8NFU0 SULF1-202ENST00000402687 4891 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
BEST4Q8NFU0 TRAF6-202ENST00000526995 4627 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
BEST4Q8NFU0 SNX1-213ENST00000561026 1374 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
BEST4Q8NFU0 C2-209ENST00000452323 1999 ntTSL 2 BASIC12.29□□□□□ -0.44
BEST4Q8NFU0 ACSF3-201ENST00000317447 3664 ntAPPRIS P1 TSL 2 BASIC12.29□□□□□ -0.44
BEST4Q8NFU0 URGCP-201ENST00000336086 5658 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
BEST4Q8NFU0 HOXB13-201ENST00000290295 3467 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
BEST4Q8NFU0 WDR60-202ENST00000407559 3769 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
BEST4Q8NFU0 ZNF75A-205ENST00000574298 2347 ntAPPRIS P1 TSL 2 BASIC12.28□□□□□ -0.44
BEST4Q8NFU0 VAMP7-202ENST00000286448 2646 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
BEST4Q8NFU0 AC092028.1-202ENST00000641483 3547 ntBASIC12.28□□□□□ -0.44
BEST4Q8NFU0 AC092028.1-201ENST00000641781 3540 ntBASIC12.28□□□□□ -0.44
Retrieved 100 of 98,524 protein–RNA pairs in 39.5 ms