Protein–RNA interactions for Protein: Q8NFH3

NUP43, Nucleoporin Nup43, humanhuman

Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP43Q8NFH3 ENDOV-207ENST00000518907 2418 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
NUP43Q8NFH3 CPNE5-202ENST00000393189 2542 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
NUP43Q8NFH3 SEMA7A-202ENST00000542748 3228 ntTSL 5 BASIC13.26□□□□□ -0.29
NUP43Q8NFH3 PDE8B-205ENST00000346042 3276 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
NUP43Q8NFH3 KLHL13-204ENST00000371882 3256 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
NUP43Q8NFH3 TNFRSF11A-201ENST00000269485 3591 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
NUP43Q8NFH3 PAK6-202ENST00000455577 4215 ntTSL 2 BASIC13.26□□□□□ -0.29
NUP43Q8NFH3 ORC6-201ENST00000219097 1628 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
NUP43Q8NFH3 CRABP1-201ENST00000299529 772 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
NUP43Q8NFH3 VRK3-201ENST00000316763 1938 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
NUP43Q8NFH3 MAP2K3-201ENST00000316920 1246 ntTSL 5 BASIC13.26□□□□□ -0.29
NUP43Q8NFH3 TMEM173-201ENST00000330794 1771 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
NUP43Q8NFH3 PDE4D-203ENST00000340635 8232 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
NUP43Q8NFH3 CFLAR-203ENST00000341222 1283 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
NUP43Q8NFH3 TRMT1L-201ENST00000367506 4392 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
NUP43Q8NFH3 IGF2-201ENST00000381389 1023 ntAPPRIS P2 TSL 1 (best) BASIC13.26□□□□□ -0.29
NUP43Q8NFH3 IGHV4-39-201ENST00000390619 425 ntAPPRIS P1 BASIC13.26□□□□□ -0.29
NUP43Q8NFH3 PPP6R2-203ENST00000395741 3304 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
NUP43Q8NFH3 ERLIN1-202ENST00000407654 1453 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
NUP43Q8NFH3 FAM224A-201ENST00000419557 2031 ntTSL 2 BASIC13.26□□□□□ -0.29
NUP43Q8NFH3 MARK2P9-201ENST00000430958 1727 ntBASIC13.26□□□□□ -0.29
NUP43Q8NFH3 NKAIN1P1-201ENST00000435754 582 ntBASIC13.26□□□□□ -0.29
NUP43Q8NFH3 AC011742.3-201ENST00000439053 820 ntBASIC13.26□□□□□ -0.29
NUP43Q8NFH3 AL031283.3-201ENST00000439788 727 ntTSL 3 BASIC13.26□□□□□ -0.29
NUP43Q8NFH3 AC007274.1-201ENST00000439805 662 ntBASIC13.26□□□□□ -0.29
NUP43Q8NFH3 DICER1-AS1-202ENST00000439819 810 ntTSL 3 BASIC13.26□□□□□ -0.29
NUP43Q8NFH3 AC003986.1-201ENST00000452700 1526 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
NUP43Q8NFH3 DSCR3-207ENST00000476950 937 ntTSL 2 BASIC13.26□□□□□ -0.29
NUP43Q8NFH3 AC090515.2-201ENST00000500929 1396 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
NUP43Q8NFH3 SLCO6A1-207ENST00000513675 1611 ntTSL 2 BASIC13.26□□□□□ -0.29
NUP43Q8NFH3 DPF3-210ENST00000556509 1138 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
NUP43Q8NFH3 AC105020.3-201ENST00000566036 560 ntTSL 4 BASIC13.26□□□□□ -0.29
NUP43Q8NFH3 SYT17-208ENST00000568433 812 ntTSL 3 BASIC13.26□□□□□ -0.29
NUP43Q8NFH3 AC120498.3-201ENST00000568884 542 ntTSL 4 BASIC13.26□□□□□ -0.29
NUP43Q8NFH3 ACAP1-208ENST00000574499 412 ntTSL 2 BASIC13.26□□□□□ -0.29
NUP43Q8NFH3 LRRC37A6P-204ENST00000575554 573 ntTSL 3 BASIC13.26□□□□□ -0.29
NUP43Q8NFH3 MIR3615-201ENST00000581999 87 ntBASIC13.26□□□□□ -0.29
NUP43Q8NFH3 MIR3188-201ENST00000583494 85 ntBASIC13.26□□□□□ -0.29
NUP43Q8NFH3 AC008133.1-201ENST00000584688 557 ntTSL 4 BASIC13.26□□□□□ -0.29
NUP43Q8NFH3 RMND1-205ENST00000622845 1484 ntTSL 5 BASIC13.26□□□□□ -0.29
NUP43Q8NFH3 CR382287.2-201ENST00000623370 1942 ntTSL 2 BASIC13.26□□□□□ -0.29
NUP43Q8NFH3 AMT-256ENST00000638063 1783 ntTSL 5 BASIC13.26□□□□□ -0.29
NUP43Q8NFH3 GRN-222ENST00000639447 1314 ntTSL 2 BASIC13.26□□□□□ -0.29
NUP43Q8NFH3 BORCS5-202ENST00000314565 4840 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
NUP43Q8NFH3 KCTD7-201ENST00000275532 4795 ntTSL 4 BASIC13.26□□□□□ -0.29
NUP43Q8NFH3 CIITA-213ENST00000618327 4657 ntAPPRIS ALT2 TSL 2 BASIC13.26□□□□□ -0.29
NUP43Q8NFH3 EPHA2-201ENST00000358432 3964 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
NUP43Q8NFH3 LRRFIP1-202ENST00000289175 3709 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
NUP43Q8NFH3 GNAS-215ENST00000371102 3438 ntTSL 5 BASIC13.26□□□□□ -0.29
NUP43Q8NFH3 FAM9C-205ENST00000542843 5858 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
NUP43Q8NFH3 KCNH6-202ENST00000456941 2928 ntTSL 5 BASIC13.26□□□□□ -0.29
NUP43Q8NFH3 SRSF2-203ENST00000392485 2885 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
NUP43Q8NFH3 PDE2A-203ENST00000418754 2855 ntTSL 2 BASIC13.26□□□□□ -0.29
NUP43Q8NFH3 LIMD1-202ENST00000440097 2773 ntTSL 5 BASIC13.26□□□□□ -0.29
NUP43Q8NFH3 RAP1GAP-211ENST00000495204 2489 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
NUP43Q8NFH3 WASF3-202ENST00000361042 4823 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
NUP43Q8NFH3 RGS9-201ENST00000262406 2375 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
NUP43Q8NFH3 C19orf66-202ENST00000397881 2140 ntAPPRIS ALT2 TSL 2 BASIC13.25□□□□□ -0.29
NUP43Q8NFH3 EFHC1-227ENST00000637089 2133 ntTSL 5 BASIC13.25□□□□□ -0.29
NUP43Q8NFH3 TEX26-AS1-205ENST00000585870 2053 ntTSL 2 BASIC13.25□□□□□ -0.29
NUP43Q8NFH3 CSPG4-201ENST00000308508 8290 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
NUP43Q8NFH3 PP14571-202ENST00000404891 2017 ntTSL 2 BASIC13.25□□□□□ -0.29
NUP43Q8NFH3 AC068760.1-201ENST00000493579 1953 ntBASIC13.25□□□□□ -0.29
NUP43Q8NFH3 CPN1-201ENST00000370418 1863 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
NUP43Q8NFH3 BRD7P5-201ENST00000299197 1822 ntBASIC13.25□□□□□ -0.29
NUP43Q8NFH3 NTN4-201ENST00000343702 3615 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
NUP43Q8NFH3 HADH-202ENST00000403312 1752 ntTSL 5 BASIC13.25□□□□□ -0.29
NUP43Q8NFH3 LINC00665-206ENST00000590622 1749 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
NUP43Q8NFH3 MIR9-3HG-201ENST00000536780 4778 ntTSL 3 BASIC13.25□□□□□ -0.29
NUP43Q8NFH3 CCDC187-203ENST00000569961 3158 ntAPPRIS P2 TSL 1 (best) BASIC13.25□□□□□ -0.29
NUP43Q8NFH3 AC138761.4-201ENST00000578881 1514 ntTSL 3 BASIC13.25□□□□□ -0.29
NUP43Q8NFH3 CHRND-206ENST00000543200 2918 ntTSL 2 BASIC13.25□□□□□ -0.29
NUP43Q8NFH3 MFSD2B-201ENST00000338315 2850 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
NUP43Q8NFH3 BTBD8-201ENST00000342818 1412 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
NUP43Q8NFH3 SNAP91-215ENST00000521743 4263 ntAPPRIS P2 TSL 5 BASIC13.25□□□□□ -0.29
NUP43Q8NFH3 PPP1CA-201ENST00000312989 1389 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
NUP43Q8NFH3 NCOA7-203ENST00000392477 6457 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
NUP43Q8NFH3 C8orf74-201ENST00000304519 1036 ntAPPRIS P2 TSL 1 (best) BASIC13.25□□□□□ -0.29
NUP43Q8NFH3 EIF3F-201ENST00000309828 1254 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
NUP43Q8NFH3 EDF1-202ENST00000371648 809 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
NUP43Q8NFH3 NRM-202ENST00000376420 1228 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
NUP43Q8NFH3 MIR1908-201ENST00000410394 80 ntBASIC13.25□□□□□ -0.29
NUP43Q8NFH3 TMEM107-203ENST00000431792 455 ntTSL 3 BASIC13.25□□□□□ -0.29
NUP43Q8NFH3 AL160290.2-201ENST00000448347 831 ntTSL 3 BASIC13.25□□□□□ -0.29
NUP43Q8NFH3 RN7SL530P-201ENST00000485097 298 ntBASIC13.25□□□□□ -0.29
NUP43Q8NFH3 WDYHV1-206ENST00000523356 869 ntTSL 3 BASIC13.25□□□□□ -0.29
NUP43Q8NFH3 AC025259.3-202ENST00000564363 687 ntTSL 2 BASIC13.25□□□□□ -0.29
NUP43Q8NFH3 AC145207.3-201ENST00000576784 529 ntTSL 5 BASIC13.25□□□□□ -0.29
NUP43Q8NFH3 NAT9-222ENST00000583476 583 ntTSL 3 BASIC13.25□□□□□ -0.29
NUP43Q8NFH3 AP005264.3-201ENST00000592370 485 ntTSL 5 BASIC13.25□□□□□ -0.29
NUP43Q8NFH3 ZCCHC4-206ENST00000612982 938 ntTSL 5 BASIC13.25□□□□□ -0.29
NUP43Q8NFH3 MIR6752-201ENST00000618442 71 ntBASIC13.25□□□□□ -0.29
NUP43Q8NFH3 LRWD1-209ENST00000626402 138 ntTSL 3 BASIC13.25□□□□□ -0.29
NUP43Q8NFH3 HSD17B4-222ENST00000515320 2494 ntTSL 2 BASIC13.25□□□□□ -0.29
NUP43Q8NFH3 ARAP1-201ENST00000334211 4942 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
NUP43Q8NFH3 RAB18-208ENST00000611151 4931 ntTSL 5 BASIC13.25□□□□□ -0.29
NUP43Q8NFH3 THEMIS2-201ENST00000328928 2337 ntTSL 2 BASIC13.25□□□□□ -0.29
NUP43Q8NFH3 TAF6-205ENST00000437822 2318 ntTSL 2 BASIC13.25□□□□□ -0.29
NUP43Q8NFH3 PPT1-203ENST00000433473 2267 ntAPPRIS ALT1 TSL 1 (best) BASIC13.25□□□□□ -0.29
NUP43Q8NFH3 ARHGEF9-230ENST00000637178 2145 ntTSL 5 BASIC13.25□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 53 ms