Protein–RNA interactions for Protein: Q86WR0

CCDC25, Coiled-coil domain-containing protein 25, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC25Q86WR0 SCML4-201ENST00000369020 1491 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
CCDC25Q86WR0 CKMT2-203ENST00000437669 1479 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
CCDC25Q86WR0 FAM78A-203ENST00000372271 3966 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
CCDC25Q86WR0 COMT-205ENST00000406520 1339 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
CCDC25Q86WR0 HERC5-201ENST00000264350 3513 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
CCDC25Q86WR0 GATA2-201ENST00000341105 3367 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
CCDC25Q86WR0 EPN2-202ENST00000347697 4664 ntAPPRIS ALT1 TSL 5 BASIC14.7□□□□□ -0.06
CCDC25Q86WR0 KREMEN1-202ENST00000400335 6138 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
CCDC25Q86WR0 PRDM16-208ENST00000514189 4236 ntAPPRIS ALT2 TSL 5 BASIC14.7□□□□□ -0.06
CCDC25Q86WR0 PRAME-202ENST00000398743 2196 ntAPPRIS P2 TSL 1 (best) BASIC14.7□□□□□ -0.06
CCDC25Q86WR0 OR3A2-205ENST00000641164 2033 ntAPPRIS P1 BASIC14.7□□□□□ -0.06
CCDC25Q86WR0 ZNF263-202ENST00000538765 1721 ntTSL 2 BASIC14.7□□□□□ -0.06
CCDC25Q86WR0 PPP1R26P2-201ENST00000611403 3595 ntBASIC14.7□□□□□ -0.06
CCDC25Q86WR0 ZNF426-204ENST00000593003 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
CCDC25Q86WR0 SERPINH1-205ENST00000525876 2283 ntTSL 2 BASIC14.7□□□□□ -0.06
CCDC25Q86WR0 LINC00511-213ENST00000581549 2265 ntTSL 2 BASIC14.7□□□□□ -0.06
CCDC25Q86WR0 FAM169B-201ENST00000332908 579 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
CCDC25Q86WR0 CMC4-201ENST00000369479 864 ntAPPRIS P1 TSL 3 BASIC14.7□□□□□ -0.06
CCDC25Q86WR0 NXT2-202ENST00000372103 1085 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
CCDC25Q86WR0 RAC2-203ENST00000405484 842 ntAPPRIS ALT1 TSL 3 BASIC14.7□□□□□ -0.06
CCDC25Q86WR0 AL035414.1-201ENST00000451327 857 ntBASIC14.7□□□□□ -0.06
CCDC25Q86WR0 LINC01336-201ENST00000503568 534 ntTSL 4 BASIC14.7□□□□□ -0.06
CCDC25Q86WR0 LINC01336-202ENST00000506086 479 ntTSL 5 BASIC14.7□□□□□ -0.06
CCDC25Q86WR0 TDH-203ENST00000531764 1110 ntBASIC14.7□□□□□ -0.06
CCDC25Q86WR0 PTP4A1P2-201ENST00000546033 454 ntBASIC14.7□□□□□ -0.06
CCDC25Q86WR0 SNAI3-AS1-206ENST00000569786 588 ntTSL 3 BASIC14.7□□□□□ -0.06
CCDC25Q86WR0 FOLR3-204ENST00000611028 820 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
CCDC25Q86WR0 AC027601.3-201ENST00000622907 509 ntBASIC14.7□□□□□ -0.06
CCDC25Q86WR0 CYP1B1-AS1-221ENST00000627172 995 ntTSL 5 BASIC14.7□□□□□ -0.06
CCDC25Q86WR0 CYP4B1-215ENST00000640628 969 ntTSL 5 BASIC14.7□□□□□ -0.06
CCDC25Q86WR0 DDC-214ENST00000622873 1839 ntTSL 3 BASIC14.7□□□□□ -0.06
CCDC25Q86WR0 FBLN2-207ENST00000492059 4193 ntAPPRIS P4 TSL 2 BASIC14.7□□□□□ -0.06
CCDC25Q86WR0 SCN2B-201ENST00000278947 5826 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
CCDC25Q86WR0 PDIA3P1-201ENST00000471856 1510 ntBASIC14.7□□□□□ -0.06
CCDC25Q86WR0 AMDHD2-202ENST00000302956 3273 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
CCDC25Q86WR0 RAB40A-202ENST00000372633 3126 ntAPPRIS P1 BASIC14.7□□□□□ -0.06
CCDC25Q86WR0 AC109466.1-209ENST00000486913 1618 ntTSL 2 BASIC14.7□□□□□ -0.06
CCDC25Q86WR0 LRCH3-203ENST00000425562 2970 ntAPPRIS ALT2 TSL 5 BASIC14.7□□□□□ -0.06
CCDC25Q86WR0 SLC45A1-201ENST00000289877 2401 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
CCDC25Q86WR0 PCDHB9-201ENST00000316105 4415 ntAPPRIS P1 BASIC14.69□□□□□ -0.06
CCDC25Q86WR0 MKRN5P-201ENST00000445263 1467 ntBASIC14.69□□□□□ -0.06
CCDC25Q86WR0 LINC01782-201ENST00000591212 2908 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
CCDC25Q86WR0 MCPH1-AS1-201ENST00000515608 2147 ntTSL 5 BASIC14.69□□□□□ -0.06
CCDC25Q86WR0 GNG4-202ENST00000366598 1721 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
CCDC25Q86WR0 RAPGEF1-201ENST00000372189 6085 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
CCDC25Q86WR0 FAM201A-201ENST00000377680 3437 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
CCDC25Q86WR0 CPNE2-204ENST00000565874 1976 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
CCDC25Q86WR0 WAPL-206ENST00000618527 6152 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
CCDC25Q86WR0 CADM1-204ENST00000536727 3520 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
CCDC25Q86WR0 TTYH3-204ENST00000407643 4537 ntTSL 5 BASIC14.69□□□□□ -0.06
CCDC25Q86WR0 NIPAL3-202ENST00000339255 1676 ntTSL 5 BASIC14.69□□□□□ -0.06
CCDC25Q86WR0 HOXC4-202ENST00000430889 1666 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
CCDC25Q86WR0 SGK2-203ENST00000373092 1906 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
CCDC25Q86WR0 C12orf10-201ENST00000267103 1192 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
CCDC25Q86WR0 SCAND1-201ENST00000305978 902 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
CCDC25Q86WR0 ENDOV-201ENST00000323854 1226 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
CCDC25Q86WR0 CD8B-201ENST00000331469 832 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
CCDC25Q86WR0 RTN4RL2-202ENST00000395120 582 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
CCDC25Q86WR0 CD8B2-202ENST00000417670 633 ntBASIC14.69□□□□□ -0.06
CCDC25Q86WR0 LINC00278-201ENST00000425031 528 ntTSL 2 BASIC14.69□□□□□ -0.06
CCDC25Q86WR0 AC114730.3-201ENST00000435195 584 ntTSL 5 BASIC14.69□□□□□ -0.06
CCDC25Q86WR0 AL590640.2-201ENST00000457038 527 ntBASIC14.69□□□□□ -0.06
CCDC25Q86WR0 AC106047.1-202ENST00000467484 482 ntTSL 2 BASIC14.69□□□□□ -0.06
CCDC25Q86WR0 PRSS30P-204ENST00000489864 650 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
CCDC25Q86WR0 AC106760.1-201ENST00000508690 800 ntBASIC14.69□□□□□ -0.06
CCDC25Q86WR0 AC125603.2-201ENST00000546835 876 ntTSL 3 BASIC14.69□□□□□ -0.06
CCDC25Q86WR0 CDK4-206ENST00000549606 558 ntTSL 2 BASIC14.69□□□□□ -0.06
CCDC25Q86WR0 AC005306.1-201ENST00000587498 661 ntTSL 3 BASIC14.69□□□□□ -0.06
CCDC25Q86WR0 RAB3D-202ENST00000589655 924 ntAPPRIS P1 TSL 2 BASIC14.69□□□□□ -0.06
CCDC25Q86WR0 ASNA1-205ENST00000611688 1214 ntTSL 5 BASIC14.69□□□□□ -0.06
CCDC25Q86WR0 ORC5-208ENST00000626700 344 ntTSL 3 BASIC14.69□□□□□ -0.06
CCDC25Q86WR0 ZNF180-201ENST00000221327 4335 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
CCDC25Q86WR0 IFT81-201ENST00000242591 3108 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
CCDC25Q86WR0 C1S-202ENST00000360817 2635 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
CCDC25Q86WR0 PEF1-201ENST00000373703 1629 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
CCDC25Q86WR0 RANBP1-208ENST00000430524 1389 ntTSL 3 BASIC14.69□□□□□ -0.06
CCDC25Q86WR0 AC004997.1-205ENST00000447976 1851 ntTSL 2 BASIC14.69□□□□□ -0.06
CCDC25Q86WR0 C3orf18-206ENST00000449241 2365 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
CCDC25Q86WR0 USP40-208ENST00000450966 5616 ntAPPRIS P2 TSL 1 (best) BASIC14.69□□□□□ -0.06
CCDC25Q86WR0 AL359845.1-201ENST00000458202 1648 ntBASIC14.69□□□□□ -0.06
CCDC25Q86WR0 ZNF501-205ENST00000620116 3382 ntAPPRIS P1 TSL 4 BASIC14.69□□□□□ -0.06
CCDC25Q86WR0 SECISBP2-202ENST00000375807 3462 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
CCDC25Q86WR0 WLS-201ENST00000262348 2748 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
CCDC25Q86WR0 TMOD1-201ENST00000259365 3343 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
CCDC25Q86WR0 GPSM3-209ENST00000487761 1460 ntTSL 5 BASIC14.69□□□□□ -0.06
CCDC25Q86WR0 NFKB1-202ENST00000394820 3693 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
CCDC25Q86WR0 BAIAP3-207ENST00000562208 3663 ntAPPRIS ALT2 TSL 2 BASIC14.69□□□□□ -0.06
CCDC25Q86WR0 DMTF1-202ENST00000394703 4038 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
CCDC25Q86WR0 BRD1-201ENST00000216267 4614 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
CCDC25Q86WR0 FBN3-207ENST00000601739 9086 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
CCDC25Q86WR0 ARHGEF33-201ENST00000398800 4300 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
CCDC25Q86WR0 SLC7A7-201ENST00000285850 2263 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
CCDC25Q86WR0 AL355102.3-201ENST00000554299 1678 ntBASIC14.68□□□□□ -0.06
CCDC25Q86WR0 GULP1-207ENST00000409843 2643 ntAPPRIS ALT1 TSL 2 BASIC14.68□□□□□ -0.06
CCDC25Q86WR0 LINC01341-202ENST00000421003 2600 ntTSL 2 BASIC14.68□□□□□ -0.06
CCDC25Q86WR0 MAP2K3-214ENST00000613338 2029 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
CCDC25Q86WR0 AC005865.2-203ENST00000636557 2959 ntTSL 5 BASIC14.68□□□□□ -0.06
CCDC25Q86WR0 ZNF750-202ENST00000572562 1513 ntTSL 2 BASIC14.68□□□□□ -0.06
CCDC25Q86WR0 C16orf45-202ENST00000452191 1865 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
CCDC25Q86WR0 CDC20B-203ENST00000381375 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 37.3 ms