Protein–RNA interactions for Protein: Q7Z3D4

LYSMD3, LysM and putative peptidoglycan-binding domain-containing protein 3, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD3Q7Z3D4 AL133466.1-201ENST00000447582 150 ntBASIC14.26□□□□□ -0.13
LYSMD3Q7Z3D4 PFN2-206ENST00000461930 606 ntTSL 4 BASIC14.26□□□□□ -0.13
LYSMD3Q7Z3D4 PDC-202ENST00000497198 1174 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
LYSMD3Q7Z3D4 NME1-NME2-203ENST00000555572 1193 ntAPPRIS ALT2 TSL 2 BASIC14.26□□□□□ -0.13
LYSMD3Q7Z3D4 AL161670.2-201ENST00000557650 1227 ntBASIC14.26□□□□□ -0.13
LYSMD3Q7Z3D4 SNHG21-204ENST00000559366 674 ntTSL 2 BASIC14.26□□□□□ -0.13
LYSMD3Q7Z3D4 AC015660.1-201ENST00000560103 395 ntTSL 3 BASIC14.26□□□□□ -0.13
LYSMD3Q7Z3D4 AC025810.1-201ENST00000569986 981 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
LYSMD3Q7Z3D4 ZSCAN32-210ENST00000573830 668 ntTSL 3 BASIC14.26□□□□□ -0.13
LYSMD3Q7Z3D4 NAT9-211ENST00000580632 799 ntTSL 3 BASIC14.26□□□□□ -0.13
LYSMD3Q7Z3D4 AC005901.1-201ENST00000592766 552 ntTSL 4 BASIC14.26□□□□□ -0.13
LYSMD3Q7Z3D4 LINC01517-203ENST00000616194 908 ntTSL 5 BASIC14.26□□□□□ -0.13
LYSMD3Q7Z3D4 CU633904.3-201ENST00000624042 1029 ntBASIC14.26□□□□□ -0.13
LYSMD3Q7Z3D4 MBD3L2B-201ENST00000636986 860 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
LYSMD3Q7Z3D4 FBXO41-201ENST00000295133 6928 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
LYSMD3Q7Z3D4 SEPT7-202ENST00000399034 4399 ntTSL 5 BASIC14.26□□□□□ -0.13
LYSMD3Q7Z3D4 ANKRD36BP2-202ENST00000421951 1899 ntTSL 3 BASIC14.26□□□□□ -0.13
LYSMD3Q7Z3D4 AKNA-206ENST00000374088 5464 ntAPPRIS P2 TSL 2 BASIC14.26□□□□□ -0.13
LYSMD3Q7Z3D4 GPER1-203ENST00000397092 2971 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
LYSMD3Q7Z3D4 CCNG1-202ENST00000393929 2366 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
LYSMD3Q7Z3D4 SPIN3-245ENST00000640768 1722 ntTSL 5 BASIC14.26□□□□□ -0.13
LYSMD3Q7Z3D4 OR2A25-202ENST00000641441 1733 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
LYSMD3Q7Z3D4 MAP2K7-203ENST00000397983 3396 ntAPPRIS ALT1 TSL 1 (best) BASIC14.26□□□□□ -0.13
LYSMD3Q7Z3D4 ZNF202-206ENST00000529691 3384 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
LYSMD3Q7Z3D4 MED15-203ENST00000382974 2235 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
LYSMD3Q7Z3D4 AL512306.2-201ENST00000444037 2219 ntTSL 2 BASIC14.26□□□□□ -0.13
LYSMD3Q7Z3D4 TTLL4-212ENST00000457313 3723 ntTSL 2 BASIC14.26□□□□□ -0.13
LYSMD3Q7Z3D4 LINC00680-205ENST00000450081 1593 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
LYSMD3Q7Z3D4 C3orf52-202ENST00000431717 2054 ntAPPRIS ALT2 TSL 2 BASIC14.26□□□□□ -0.13
LYSMD3Q7Z3D4 SPAG9-222ENST00000618113 8246 ntAPPRIS ALT1 TSL 5 BASIC14.26□□□□□ -0.13
LYSMD3Q7Z3D4 SERPINF1-201ENST00000254722 1548 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
LYSMD3Q7Z3D4 LINC00479-201ENST00000412102 2033 ntTSL 2 BASIC14.25□□□□□ -0.13
LYSMD3Q7Z3D4 PSEN2-201ENST00000366782 2465 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
LYSMD3Q7Z3D4 FLJ40288-201ENST00000332558 1998 ntTSL 2 BASIC14.25□□□□□ -0.13
LYSMD3Q7Z3D4 COASY-211ENST00000590958 1976 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
LYSMD3Q7Z3D4 ZCCHC17-207ENST00000616859 1458 ntTSL 4 BASIC14.25□□□□□ -0.13
LYSMD3Q7Z3D4 ZCCHC17-208ENST00000618216 1489 ntTSL 3 BASIC14.25□□□□□ -0.13
LYSMD3Q7Z3D4 CC2D1B-201ENST00000284376 3377 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
LYSMD3Q7Z3D4 BORCS8-202ENST00000462790 1429 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
LYSMD3Q7Z3D4 SIRT5-203ENST00000379262 2339 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
LYSMD3Q7Z3D4 BRMS1-202ENST00000425825 1363 ntTSL 5 BASIC14.25□□□□□ -0.13
LYSMD3Q7Z3D4 POTEM-201ENST00000547889 1817 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
LYSMD3Q7Z3D4 TLL1-201ENST00000061240 6708 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
LYSMD3Q7Z3D4 AL590824.1-201ENST00000403828 1349 ntBASIC14.25□□□□□ -0.13
LYSMD3Q7Z3D4 SHMT1P1-201ENST00000419974 1312 ntBASIC14.25□□□□□ -0.13
LYSMD3Q7Z3D4 PABPC1-201ENST00000318607 3485 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
LYSMD3Q7Z3D4 PRIMA1-201ENST00000316227 1080 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
LYSMD3Q7Z3D4 RANBP1-201ENST00000331821 837 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
LYSMD3Q7Z3D4 DKFZp779M0652-201ENST00000378779 649 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
LYSMD3Q7Z3D4 ZSCAN32-204ENST00000422427 1267 ntTSL 2 BASIC14.25□□□□□ -0.13
LYSMD3Q7Z3D4 PDIA3P2-201ENST00000428073 158 ntBASIC14.25□□□□□ -0.13
LYSMD3Q7Z3D4 SGO1-AS1-201ENST00000441442 499 ntTSL 4 BASIC14.25□□□□□ -0.13
LYSMD3Q7Z3D4 MSRA-203ENST00000441698 788 ntTSL 2 BASIC14.25□□□□□ -0.13
LYSMD3Q7Z3D4 TAC3-208ENST00000441881 731 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
LYSMD3Q7Z3D4 NDRG1-209ENST00000518176 888 ntTSL 2 BASIC14.25□□□□□ -0.13
LYSMD3Q7Z3D4 AC104561.3-201ENST00000518590 715 ntTSL 5 BASIC14.25□□□□□ -0.13
LYSMD3Q7Z3D4 HOXA10-AS-202ENST00000519935 1161 ntTSL 3 BASIC14.25□□□□□ -0.13
LYSMD3Q7Z3D4 POU5F1P2-201ENST00000521750 823 ntBASIC14.25□□□□□ -0.13
LYSMD3Q7Z3D4 AP001547.1-201ENST00000527440 374 ntTSL 3 BASIC14.25□□□□□ -0.13
LYSMD3Q7Z3D4 NDUFC2-204ENST00000528164 561 ntTSL 2 BASIC14.25□□□□□ -0.13
LYSMD3Q7Z3D4 AC012322.1-201ENST00000561657 861 ntTSL 3 BASIC14.25□□□□□ -0.13
LYSMD3Q7Z3D4 IRF3-215ENST00000596822 823 ntTSL 3 BASIC14.25□□□□□ -0.13
LYSMD3Q7Z3D4 AL109837.1-201ENST00000603272 613 ntBASIC14.25□□□□□ -0.13
LYSMD3Q7Z3D4 NDUFB5-216ENST00000611971 951 ntTSL 2 BASIC14.25□□□□□ -0.13
LYSMD3Q7Z3D4 TAC3-211ENST00000615887 1120 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
LYSMD3Q7Z3D4 LINC01668-201ENST00000635001 513 ntTSL 4 BASIC14.25□□□□□ -0.13
LYSMD3Q7Z3D4 COL5A1-208ENST00000618395 8437 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
LYSMD3Q7Z3D4 ARHGAP10-201ENST00000336498 3299 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
LYSMD3Q7Z3D4 GIT1-211ENST00000581348 2827 ntAPPRIS ALT2 TSL 2 BASIC14.25□□□□□ -0.13
LYSMD3Q7Z3D4 ARHGEF1-201ENST00000337665 3171 ntAPPRIS P4 TSL 1 (best) BASIC14.25□□□□□ -0.13
LYSMD3Q7Z3D4 GOLGA8EP-201ENST00000530246 1959 ntBASIC14.25□□□□□ -0.13
LYSMD3Q7Z3D4 AC113189.2-201ENST00000575310 1975 ntTSL 2 BASIC14.25□□□□□ -0.13
LYSMD3Q7Z3D4 CHIT1-201ENST00000255427 1598 ntTSL 2 BASIC14.25□□□□□ -0.13
LYSMD3Q7Z3D4 GRIN1-203ENST00000371550 3940 ntTSL 5 BASIC14.25□□□□□ -0.13
LYSMD3Q7Z3D4 CDCA3-207ENST00000538862 1943 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
LYSMD3Q7Z3D4 PPP1R1B-203ENST00000394267 1504 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
LYSMD3Q7Z3D4 AL589669.1-201ENST00000639829 1506 ntTSL 5 BASIC14.25□□□□□ -0.13
LYSMD3Q7Z3D4 IL17RD-201ENST00000296318 8720 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
LYSMD3Q7Z3D4 GRHL1-202ENST00000405379 1881 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
LYSMD3Q7Z3D4 ATE1-202ENST00000369040 4803 ntTSL 2 BASIC14.25□□□□□ -0.13
LYSMD3Q7Z3D4 RHD-209ENST00000568195 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
LYSMD3Q7Z3D4 DNAJC3-AS1-201ENST00000499499 2908 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
LYSMD3Q7Z3D4 ZNF829-201ENST00000391711 1805 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
LYSMD3Q7Z3D4 CDK20-202ENST00000336654 2176 ntTSL 2 BASIC14.24□□□□□ -0.13
LYSMD3Q7Z3D4 ZBP1-201ENST00000371173 2195 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
LYSMD3Q7Z3D4 KLHL34-201ENST00000379499 3641 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
LYSMD3Q7Z3D4 AL928654.5-201ENST00000624831 2501 ntBASIC14.24□□□□□ -0.13
LYSMD3Q7Z3D4 TMEM176B-204ENST00000447204 1430 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
LYSMD3Q7Z3D4 CCNA1-204ENST00000630422 1751 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
LYSMD3Q7Z3D4 SLC46A3-201ENST00000266943 3173 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
LYSMD3Q7Z3D4 AC138028.2-202ENST00000567968 4528 ntTSL 2 BASIC14.24□□□□□ -0.13
LYSMD3Q7Z3D4 PRAME-214ENST00000543184 2758 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
LYSMD3Q7Z3D4 ZFP2-201ENST00000361362 2429 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
LYSMD3Q7Z3D4 AGAP10P-201ENST00000454844 2418 ntBASIC14.24□□□□□ -0.13
LYSMD3Q7Z3D4 MAPK14-204ENST00000468133 1376 ntTSL 2 BASIC14.24□□□□□ -0.13
LYSMD3Q7Z3D4 PCDHGB7-201ENST00000398594 4765 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
LYSMD3Q7Z3D4 STIP1-203ENST00000358794 2743 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
LYSMD3Q7Z3D4 SMG9-211ENST00000601170 2387 ntTSL 2 BASIC14.24□□□□□ -0.13
LYSMD3Q7Z3D4 DPEP2-202ENST00000393847 1697 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
LYSMD3Q7Z3D4 SNX19-213ENST00000534726 1656 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 43.8 ms