Protein–RNA interactions for Protein: Q5XG99

LYSMD4, LysM and putative peptidoglycan-binding domain-containing protein 4, humanhuman

Predictions only

Length 296 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD4Q5XG99 UBAP1-201ENST00000297661 2735 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
LYSMD4Q5XG99 GRB2-201ENST00000316615 3181 ntTSL 5 BASIC13.71□□□□□ -0.21
LYSMD4Q5XG99 AZGP1-202ENST00000411734 2027 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
LYSMD4Q5XG99 FP565260.2-201ENST00000623476 1599 ntAPPRIS P1 TSL 3 BASIC13.71□□□□□ -0.21
LYSMD4Q5XG99 PDE1C-202ENST00000396182 2420 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
LYSMD4Q5XG99 LDLR-204ENST00000545707 2429 ntTSL 2 BASIC13.71□□□□□ -0.21
LYSMD4Q5XG99 MYB-242ENST00000618728 3545 ntTSL 5 BASIC13.71□□□□□ -0.21
LYSMD4Q5XG99 CPNE2-204ENST00000565874 1976 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
LYSMD4Q5XG99 PCGF2-203ENST00000616129 1534 ntTSL 5 BASIC13.71□□□□□ -0.21
LYSMD4Q5XG99 MDM1-205ENST00000430606 2170 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
LYSMD4Q5XG99 GRAMD4-203ENST00000408031 2834 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
LYSMD4Q5XG99 SMAD2-212ENST00000591214 1714 ntTSL 2 BASIC13.71□□□□□ -0.21
LYSMD4Q5XG99 NBEA-201ENST00000310336 10794 ntAPPRIS ALT1 TSL 1 (best) BASIC13.71□□□□□ -0.21
LYSMD4Q5XG99 MARS-233ENST00000628866 2583 ntTSL 5 BASIC13.71□□□□□ -0.21
LYSMD4Q5XG99 SMARCA2-203ENST00000349721 5761 ntTSL 5 BASIC13.71□□□□□ -0.21
LYSMD4Q5XG99 PBX3-201ENST00000342287 2755 ntAPPRIS ALT1 TSL 5 BASIC13.71□□□□□ -0.21
LYSMD4Q5XG99 RNF31-201ENST00000324103 3627 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
LYSMD4Q5XG99 MPV17-207ENST00000403262 665 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
LYSMD4Q5XG99 AC099567.1-201ENST00000414418 931 ntTSL 5 BASIC13.71□□□□□ -0.21
LYSMD4Q5XG99 AL356417.1-201ENST00000421161 845 ntTSL 3 BASIC13.71□□□□□ -0.21
LYSMD4Q5XG99 AC136604.1-202ENST00000425471 771 ntBASIC13.71□□□□□ -0.21
LYSMD4Q5XG99 AC004895.1-203ENST00000428901 540 ntTSL 4 BASIC13.71□□□□□ -0.21
LYSMD4Q5XG99 AC138409.2-203ENST00000508395 553 ntTSL 4 BASIC13.71□□□□□ -0.21
LYSMD4Q5XG99 POLR3G-207ENST00000514483 682 ntTSL 3 BASIC13.71□□□□□ -0.21
LYSMD4Q5XG99 EXTL3-AS1-203ENST00000520023 780 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
LYSMD4Q5XG99 LINC00824-204ENST00000520766 597 ntTSL 5 BASIC13.71□□□□□ -0.21
LYSMD4Q5XG99 SNRPF-204ENST00000552085 815 ntTSL 3 BASIC13.71□□□□□ -0.21
LYSMD4Q5XG99 AC009055.1-201ENST00000562656 781 ntTSL 3 BASIC13.71□□□□□ -0.21
LYSMD4Q5XG99 AC090617.4-201ENST00000572404 422 ntTSL 3 BASIC13.71□□□□□ -0.21
LYSMD4Q5XG99 FAM187B2P-201ENST00000577135 713 ntBASIC13.71□□□□□ -0.21
LYSMD4Q5XG99 MIR4254-201ENST00000581063 76 ntBASIC13.71□□□□□ -0.21
LYSMD4Q5XG99 AC012617.1-201ENST00000586345 797 ntTSL 2 BASIC13.71□□□□□ -0.21
LYSMD4Q5XG99 LINC02333-201ENST00000603464 852 ntTSL 3 BASIC13.71□□□□□ -0.21
LYSMD4Q5XG99 MIAT_exon5_3.1-201ENST00000613656 377 ntBASIC13.71□□□□□ -0.21
LYSMD4Q5XG99 NEK5-204ENST00000617045 2127 ntAPPRIS P1 TSL 2 BASIC13.71□□□□□ -0.21
LYSMD4Q5XG99 DTX3-202ENST00000548198 3199 ntAPPRIS P3 TSL 2 BASIC13.71□□□□□ -0.21
LYSMD4Q5XG99 POR-201ENST00000394893 2532 ntTSL 5 BASIC13.71□□□□□ -0.21
LYSMD4Q5XG99 RASAL1-207ENST00000548055 2502 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
LYSMD4Q5XG99 NSFL1C-201ENST00000216879 3568 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
LYSMD4Q5XG99 CICP14-201ENST00000629111 2732 ntBASIC13.71□□□□□ -0.21
LYSMD4Q5XG99 EFHC1-230ENST00000637263 2089 ntTSL 5 BASIC13.71□□□□□ -0.21
LYSMD4Q5XG99 KDELC2-201ENST00000323468 4312 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
LYSMD4Q5XG99 BCAR1-206ENST00000535626 2894 ntTSL 2 BASIC13.71□□□□□ -0.22
LYSMD4Q5XG99 TBPL2-201ENST00000247219 2037 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
LYSMD4Q5XG99 TNFSF13-202ENST00000349228 2036 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
LYSMD4Q5XG99 TTYH2-206ENST00000529107 2015 ntTSL 2 BASIC13.71□□□□□ -0.22
LYSMD4Q5XG99 SURF4-209ENST00000618229 3200 ntTSL 2 BASIC13.71□□□□□ -0.22
LYSMD4Q5XG99 UHRF1BP1L-201ENST00000279907 5168 ntAPPRIS P4 TSL 1 (best) BASIC13.71□□□□□ -0.22
LYSMD4Q5XG99 RASA1-201ENST00000274376 3752 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.22
LYSMD4Q5XG99 BUD13-201ENST00000260210 2196 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.22
LYSMD4Q5XG99 AGPAT1-205ENST00000395497 2168 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.22
LYSMD4Q5XG99 LDB3-204ENST00000372066 1598 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
LYSMD4Q5XG99 CST9-201ENST00000376971 1592 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
LYSMD4Q5XG99 TEX44-201ENST00000313965 1383 ntAPPRIS P1 BASIC13.71□□□□□ -0.22
LYSMD4Q5XG99 AMN1-201ENST00000281471 2110 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
LYSMD4Q5XG99 ELMOD1-201ENST00000265840 2852 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
LYSMD4Q5XG99 RUFY2-204ENST00000399200 2685 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
LYSMD4Q5XG99 SEC16A-202ENST00000290037 8982 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
LYSMD4Q5XG99 SELENBP1-208ENST00000447402 1530 ntTSL 2 BASIC13.7□□□□□ -0.22
LYSMD4Q5XG99 UBA1-202ENST00000377269 2497 ntTSL 2 BASIC13.7□□□□□ -0.22
LYSMD4Q5XG99 KIF3C-201ENST00000264712 5344 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
LYSMD4Q5XG99 FAM9B-201ENST00000327220 1340 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
LYSMD4Q5XG99 APC2-201ENST00000233607 10151 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
LYSMD4Q5XG99 C2orf68-201ENST00000306336 2837 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
LYSMD4Q5XG99 FBXL12-201ENST00000247977 1852 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
LYSMD4Q5XG99 ERG28-201ENST00000256319 2633 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
LYSMD4Q5XG99 OR2V1-205ENST00000642036 2609 ntAPPRIS P1 BASIC13.7□□□□□ -0.22
LYSMD4Q5XG99 FTSJ1-203ENST00000396894 1669 ntTSL 2 BASIC13.7□□□□□ -0.22
LYSMD4Q5XG99 TBX5-203ENST00000405440 2203 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
LYSMD4Q5XG99 DACH1-204ENST00000620444 4627 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
LYSMD4Q5XG99 COLQ-202ENST00000383786 1482 ntTSL 5 BASIC13.7□□□□□ -0.22
LYSMD4Q5XG99 AC090505.1-201ENST00000430515 1834 ntBASIC13.7□□□□□ -0.22
LYSMD4Q5XG99 PROK2-201ENST00000295619 1022 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
LYSMD4Q5XG99 PITHD1-202ENST00000374524 1292 ntTSL 3 BASIC13.7□□□□□ -0.22
LYSMD4Q5XG99 HNRNPA1P21-201ENST00000424115 961 ntBASIC13.7□□□□□ -0.22
LYSMD4Q5XG99 EEF1DP5-201ENST00000431410 772 ntBASIC13.7□□□□□ -0.22
LYSMD4Q5XG99 HOXC-AS3-203ENST00000514702 368 ntTSL 3 BASIC13.7□□□□□ -0.22
LYSMD4Q5XG99 IGHEP1-201ENST00000521393 651 ntBASIC13.7□□□□□ -0.22
LYSMD4Q5XG99 MED11-202ENST00000573708 802 ntTSL 2 BASIC13.7□□□□□ -0.22
LYSMD4Q5XG99 LINC01082-201ENST00000601250 441 ntTSL 2 BASIC13.7□□□□□ -0.22
LYSMD4Q5XG99 NID2-208ENST00000617139 3827 ntTSL 5 BASIC13.7□□□□□ -0.22
LYSMD4Q5XG99 GARS-210ENST00000627489 324 ntTSL 4 BASIC13.7□□□□□ -0.22
LYSMD4Q5XG99 ZBTB9-201ENST00000395064 2716 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
LYSMD4Q5XG99 USP43-201ENST00000285199 4169 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
LYSMD4Q5XG99 KCNS1-201ENST00000306117 4538 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
LYSMD4Q5XG99 HNRNPLL-205ENST00000409636 3980 ntTSL 2 BASIC13.7□□□□□ -0.22
LYSMD4Q5XG99 GGT6-201ENST00000301395 2534 ntTSL 2 BASIC13.7□□□□□ -0.22
LYSMD4Q5XG99 HTR3A-202ENST00000355556 2331 ntTSL 2 BASIC13.7□□□□□ -0.22
LYSMD4Q5XG99 SLC6A20-204ENST00000456124 2662 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
LYSMD4Q5XG99 LINC02212-201ENST00000515243 2130 ntTSL 2 BASIC13.7□□□□□ -0.22
LYSMD4Q5XG99 ORAOV1-201ENST00000279147 2478 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
LYSMD4Q5XG99 NICN1-201ENST00000273598 2616 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
LYSMD4Q5XG99 TRIM39-201ENST00000376656 3338 ntAPPRIS P4 TSL 2 BASIC13.7□□□□□ -0.22
LYSMD4Q5XG99 TAOK3-201ENST00000392533 4384 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
LYSMD4Q5XG99 ATP11B-201ENST00000323116 7325 ntAPPRIS P1 TSL 2 BASIC13.7□□□□□ -0.22
LYSMD4Q5XG99 SP6-201ENST00000342234 3800 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
LYSMD4Q5XG99 MGAT1-201ENST00000307826 2761 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
LYSMD4Q5XG99 AP1M2-201ENST00000250244 1749 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
LYSMD4Q5XG99 HYAL1-209ENST00000618175 2225 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
LYSMD4Q5XG99 BPI-201ENST00000262865 1874 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 38.8 ms