Protein–RNA interactions for Protein: Q5THJ4

VPS13D, Vacuolar protein sorting-associated protein 13D, humanhuman

Predictions only

Length 4,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13DQ5THJ4 PRDM8-201ENST00000339711 4095 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
VPS13DQ5THJ4 TMPRSS3-204ENST00000433957 2403 ntAPPRIS ALT1 TSL 1 (best) BASIC9.08□□□□□ -0.96
VPS13DQ5THJ4 MAPK7-202ENST00000308406 3149 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
VPS13DQ5THJ4 CD34-203ENST00000367036 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC9.08□□□□□ -0.96
VPS13DQ5THJ4 ZNF384-204ENST00000396801 3008 ntAPPRIS P1 TSL 2 BASIC9.08□□□□□ -0.96
VPS13DQ5THJ4 ATP6V0A1-206ENST00000585525 2679 ntTSL 2 BASIC9.08□□□□□ -0.96
VPS13DQ5THJ4 SEMA7A-202ENST00000542748 3228 ntTSL 5 BASIC9.08□□□□□ -0.96
VPS13DQ5THJ4 PIDD1-201ENST00000347755 2998 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
VPS13DQ5THJ4 PLA2G2E-201ENST00000375116 785 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
VPS13DQ5THJ4 AL161668.2-201ENST00000531638 492 ntTSL 5 BASIC9.08□□□□□ -0.96
VPS13DQ5THJ4 ANAPC15-209ENST00000538919 849 ntAPPRIS P3 TSL 3 BASIC9.08□□□□□ -0.96
VPS13DQ5THJ4 AC090617.4-201ENST00000572404 422 ntTSL 3 BASIC9.08□□□□□ -0.96
VPS13DQ5THJ4 MIEF2-206ENST00000578174 589 ntTSL 4 BASIC9.08□□□□□ -0.96
VPS13DQ5THJ4 U62317.4-201ENST00000609758 448 ntBASIC9.08□□□□□ -0.96
VPS13DQ5THJ4 AC112702.1-201ENST00000623712 366 ntBASIC9.08□□□□□ -0.96
VPS13DQ5THJ4 GTF3A-209ENST00000640289 1098 ntAPPRIS P2 TSL 1 (best) BASIC9.08□□□□□ -0.96
VPS13DQ5THJ4 BPIFB1-201ENST00000253354 1727 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
VPS13DQ5THJ4 TNNI1-201ENST00000336092 1750 ntAPPRIS P2 TSL 5 BASIC9.07□□□□□ -0.96
VPS13DQ5THJ4 LINC01002-209ENST00000631858 1761 ntTSL 2 BASIC9.07□□□□□ -0.96
VPS13DQ5THJ4 LINC00839-202ENST00000429940 2253 ntTSL 2 BASIC9.07□□□□□ -0.96
VPS13DQ5THJ4 MYLK2-201ENST00000375985 2787 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
VPS13DQ5THJ4 PCDHGC5-202ENST00000610789 2763 ntAPPRIS ALT2 BASIC9.07□□□□□ -0.96
VPS13DQ5THJ4 CLCN4-201ENST00000380829 2418 ntTSL 5 BASIC9.07□□□□□ -0.96
VPS13DQ5THJ4 IMPDH1-204ENST00000419067 2431 ntTSL 3 BASIC9.07□□□□□ -0.96
VPS13DQ5THJ4 TMPRSS6-202ENST00000381792 3260 ntAPPRIS ALT2 TSL 5 BASIC9.07□□□□□ -0.96
VPS13DQ5THJ4 FAM129B-201ENST00000373312 3957 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
VPS13DQ5THJ4 STT3A-211ENST00000529196 2402 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
VPS13DQ5THJ4 ZNF655-201ENST00000252713 2535 ntAPPRIS P3 TSL 1 (best) BASIC9.07□□□□□ -0.96
VPS13DQ5THJ4 SLIRP-201ENST00000238688 394 ntAPPRIS P3 TSL 2 BASIC9.07□□□□□ -0.96
VPS13DQ5THJ4 SNCG-202ENST00000372017 701 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
VPS13DQ5THJ4 NAA10-205ENST00000393712 908 ntTSL 5 BASIC9.07□□□□□ -0.96
VPS13DQ5THJ4 NANOS3-202ENST00000397555 769 ntAPPRIS P1 TSL 5 BASIC9.07□□□□□ -0.96
VPS13DQ5THJ4 POLR3DP1-201ENST00000398689 1176 ntBASIC9.07□□□□□ -0.96
VPS13DQ5THJ4 RPE-208ENST00000436630 1128 ntTSL 2 BASIC9.07□□□□□ -0.96
VPS13DQ5THJ4 LINC00299-203ENST00000444688 537 ntTSL 4 BASIC9.07□□□□□ -0.96
VPS13DQ5THJ4 SRP9P1-201ENST00000445874 261 ntBASIC9.07□□□□□ -0.96
VPS13DQ5THJ4 AC008750.2-201ENST00000526996 627 ntTSL 3 BASIC9.07□□□□□ -0.96
VPS13DQ5THJ4 PDCD2-205ENST00000537445 1114 ntTSL 3 BASIC9.07□□□□□ -0.96
VPS13DQ5THJ4 LIMD2-210ENST00000582055 509 ntTSL 2 BASIC9.07□□□□□ -0.96
VPS13DQ5THJ4 AC006262.2-202ENST00000600152 333 ntTSL 2 BASIC9.07□□□□□ -0.96
VPS13DQ5THJ4 SDHD-214ENST00000614349 516 ntAPPRIS P1 TSL 5 BASIC9.07□□□□□ -0.96
VPS13DQ5THJ4 AC020917.4-201ENST00000623994 1999 ntBASIC9.07□□□□□ -0.96
VPS13DQ5THJ4 AHCYP7-201ENST00000560847 1308 ntBASIC9.07□□□□□ -0.96
VPS13DQ5THJ4 TSEN2-205ENST00000444864 2697 ntTSL 2 BASIC9.07□□□□□ -0.96
VPS13DQ5THJ4 FAM124B-201ENST00000243806 2030 ntTSL 1 (best) BASIC9.07□□□□□ -0.96
VPS13DQ5THJ4 CFAP20-201ENST00000262498 1354 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
VPS13DQ5THJ4 MCPH1-AS1-201ENST00000515608 2147 ntTSL 5 BASIC9.07□□□□□ -0.96
VPS13DQ5THJ4 TRIM7-203ENST00000393315 2851 ntTSL 1 (best) BASIC9.07□□□□□ -0.96
VPS13DQ5THJ4 CEBPZOS-203ENST00000397226 1499 ntAPPRIS P1 TSL 5 BASIC9.07□□□□□ -0.96
VPS13DQ5THJ4 ZSCAN5DP-201ENST00000600684 1488 ntBASIC9.07□□□□□ -0.96
VPS13DQ5THJ4 STX3-207ENST00000633708 3111 ntTSL 5 BASIC9.07□□□□□ -0.96
VPS13DQ5THJ4 AGAP10P-201ENST00000454844 2418 ntBASIC9.07□□□□□ -0.96
VPS13DQ5THJ4 XYLB-203ENST00000427323 1666 ntTSL 2 BASIC9.07□□□□□ -0.96
VPS13DQ5THJ4 ATG9A-204ENST00000409422 2512 ntTSL 5 BASIC9.07□□□□□ -0.96
VPS13DQ5THJ4 PCYT2-203ENST00000538936 5147 ntTSL 1 (best) BASIC9.07□□□□□ -0.96
VPS13DQ5THJ4 PRKD1-202ENST00000415220 3189 ntAPPRIS ALT2 TSL 5 BASIC9.07□□□□□ -0.96
VPS13DQ5THJ4 TATDN3-202ENST00000366974 2389 ntAPPRIS P3 TSL 1 (best) BASIC9.07□□□□□ -0.96
VPS13DQ5THJ4 HYKK-201ENST00000388988 1235 ntAPPRIS P1 TSL 5 BASIC9.07□□□□□ -0.96
VPS13DQ5THJ4 AC096536.3-201ENST00000415336 575 ntTSL 1 (best) BASIC9.07□□□□□ -0.96
VPS13DQ5THJ4 ZNF32-AS2-201ENST00000418966 905 ntTSL 5 BASIC9.07□□□□□ -0.96
VPS13DQ5THJ4 AC005042.2-201ENST00000449526 510 ntTSL 4 BASIC9.07□□□□□ -0.96
VPS13DQ5THJ4 TULP3P1-202ENST00000453253 1291 ntBASIC9.07□□□□□ -0.96
VPS13DQ5THJ4 EEF1GP2-201ENST00000509352 1243 ntBASIC9.07□□□□□ -0.96
VPS13DQ5THJ4 IGHVII-74-1-201ENST00000517572 241 ntBASIC9.07□□□□□ -0.96
VPS13DQ5THJ4 AC104117.1-201ENST00000517817 900 ntBASIC9.07□□□□□ -0.96
VPS13DQ5THJ4 AC126177.4-201ENST00000547452 731 ntTSL 5 BASIC9.07□□□□□ -0.96
VPS13DQ5THJ4 RPS9-213ENST00000626547 476 ntTSL 2 BASIC9.07□□□□□ -0.96
VPS13DQ5THJ4 AC093495.1-215ENST00000626655 821 ntTSL 5 BASIC9.07□□□□□ -0.96
VPS13DQ5THJ4 SPATA18-202ENST00000419395 2816 ntTSL 2 BASIC9.07□□□□□ -0.96
VPS13DQ5THJ4 WASH2P-202ENST00000538033 2800 ntTSL 2 BASIC9.07□□□□□ -0.96
VPS13DQ5THJ4 POLR2E-213ENST00000615234 2831 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
VPS13DQ5THJ4 AP000787.1-205ENST00000536683 1485 ntTSL 5 BASIC9.07□□□□□ -0.96
VPS13DQ5THJ4 RNF11-201ENST00000242719 3084 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
VPS13DQ5THJ4 HLA-DPA1-242ENST00000419277 1704 ntAPPRIS P2 BASIC9.07□□□□□ -0.96
VPS13DQ5THJ4 TESPA1-201ENST00000316577 1898 ntAPPRIS P3 TSL 1 (best) BASIC9.07□□□□□ -0.96
VPS13DQ5THJ4 GAS6-AS2-201ENST00000608651 1952 ntTSL 2 BASIC9.07□□□□□ -0.96
VPS13DQ5THJ4 ENSA-208ENST00000369014 2085 ntAPPRIS P4 TSL 1 (best) BASIC9.07□□□□□ -0.96
VPS13DQ5THJ4 SLC26A5-203ENST00000354356 2686 ntAPPRIS ALT1 TSL 5 BASIC9.07□□□□□ -0.96
VPS13DQ5THJ4 PIP5K1B-208ENST00000541509 2664 ntTSL 2 BASIC9.07□□□□□ -0.96
VPS13DQ5THJ4 IMPDH1-201ENST00000338791 2881 ntTSL 2 BASIC9.07□□□□□ -0.96
VPS13DQ5THJ4 IMPDH1-217ENST00000626419 2862 ntAPPRIS ALT1 TSL 5 BASIC9.07□□□□□ -0.96
VPS13DQ5THJ4 EFEMP1-201ENST00000355426 1820 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
VPS13DQ5THJ4 MRPL55-207ENST00000366733 834 ntAPPRIS P1 TSL 2 BASIC9.07□□□□□ -0.96
VPS13DQ5THJ4 NIPSNAP3A-201ENST00000374767 1633 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
VPS13DQ5THJ4 AC005822.1-201ENST00000414124 1034 ntBASIC9.07□□□□□ -0.96
VPS13DQ5THJ4 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC9.07□□□□□ -0.96
VPS13DQ5THJ4 POLR2J2-203ENST00000476151 1598 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
VPS13DQ5THJ4 STAU2-212ENST00000521419 972 ntTSL 1 (best) BASIC9.07□□□□□ -0.96
VPS13DQ5THJ4 AC090616.6-202ENST00000583601 1088 ntBASIC9.07□□□□□ -0.96
VPS13DQ5THJ4 AC091736.1-201ENST00000609370 305 ntBASIC9.07□□□□□ -0.96
VPS13DQ5THJ4 Metazoa_SRP.47-201ENST00000616942 279 ntBASIC9.07□□□□□ -0.96
VPS13DQ5THJ4 FMNL3-202ENST00000352151 4006 ntAPPRIS P3 TSL 2 BASIC9.07□□□□□ -0.96
VPS13DQ5THJ4 TRAPPC8-210ENST00000582513 3205 ntTSL 1 (best) BASIC9.07□□□□□ -0.96
VPS13DQ5THJ4 TMPRSS6-204ENST00000406856 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC9.07□□□□□ -0.96
VPS13DQ5THJ4 BCL10-201ENST00000370580 2819 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
VPS13DQ5THJ4 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC9.06□□□□□ -0.96
VPS13DQ5THJ4 TMEM78-201ENST00000323223 2175 ntAPPRIS P1 BASIC9.06□□□□□ -0.96
VPS13DQ5THJ4 APCDD1L-AS1-203ENST00000427140 2092 ntTSL 2 BASIC9.06□□□□□ -0.96
VPS13DQ5THJ4 PRAMEF25-202ENST00000619661 1840 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
VPS13DQ5THJ4 KCTD10-208ENST00000540089 3096 ntTSL 2 BASIC9.06□□□□□ -0.96
Retrieved 100 of 98,524 protein–RNA pairs in 89.6 ms