Protein–RNA interactions for Protein: Q52LD8

RFTN2, Raftlin-2, humanhuman

Predicted RBP Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFTN2Q52LD8 EMC10-201ENST00000334976 9446 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
RFTN2Q52LD8 SGTB-201ENST00000381007 5469 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
RFTN2Q52LD8 RIPOR1-204ENST00000428437 4152 ntAPPRIS ALT2 TSL 2 BASIC13.64□□□□□ -0.23
RFTN2Q52LD8 TBC1D22A-201ENST00000337137 3787 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
RFTN2Q52LD8 PRRT3-203ENST00000412055 3761 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
RFTN2Q52LD8 GTF2IRD2B-203ENST00000472837 3560 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
RFTN2Q52LD8 AC134312.1-201ENST00000378417 3468 ntTSL 2 BASIC13.64□□□□□ -0.23
RFTN2Q52LD8 INVS-201ENST00000262456 2968 ntTSL 5 BASIC13.64□□□□□ -0.23
RFTN2Q52LD8 MX1-202ENST00000398598 2850 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
RFTN2Q52LD8 CAP2-209ENST00000616440 2776 ntTSL 2 BASIC13.64□□□□□ -0.23
RFTN2Q52LD8 ASF1A-201ENST00000229595 2362 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
RFTN2Q52LD8 WNK1-201ENST00000315939 10452 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
RFTN2Q52LD8 SLC6A6P1-201ENST00000413933 1850 ntBASIC13.64□□□□□ -0.23
RFTN2Q52LD8 TCP11L1-209ENST00000531632 1898 ntAPPRIS P1 TSL 2 BASIC13.64□□□□□ -0.23
RFTN2Q52LD8 SALL4P6-201ENST00000429385 1691 ntBASIC13.64□□□□□ -0.23
RFTN2Q52LD8 GRIK4-202ENST00000438375 4214 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
RFTN2Q52LD8 STIM1-201ENST00000300737 4038 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
RFTN2Q52LD8 ANKRD19P-201ENST00000338192 862 ntBASIC13.64□□□□□ -0.23
RFTN2Q52LD8 MASP2-202ENST00000400898 726 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
RFTN2Q52LD8 HOXB-AS3-206ENST00000474040 741 ntTSL 3 BASIC13.64□□□□□ -0.23
RFTN2Q52LD8 MUTYH-237ENST00000531105 501 ntTSL 5 BASIC13.64□□□□□ -0.23
RFTN2Q52LD8 KRT17P8-201ENST00000540749 863 ntBASIC13.64□□□□□ -0.23
RFTN2Q52LD8 AP003065.1-201ENST00000540912 562 ntTSL 4 BASIC13.64□□□□□ -0.23
RFTN2Q52LD8 AP001453.3-201ENST00000545800 853 ntTSL 3 BASIC13.64□□□□□ -0.23
RFTN2Q52LD8 AC008050.1-201ENST00000554926 632 ntTSL 3 BASIC13.64□□□□□ -0.23
RFTN2Q52LD8 MAX-218ENST00000557746 571 ntTSL 4 BASIC13.64□□□□□ -0.23
RFTN2Q52LD8 CYGB-203ENST00000589145 788 ntTSL 3 BASIC13.64□□□□□ -0.23
RFTN2Q52LD8 DDX5-235ENST00000630471 473 ntTSL 4 BASIC13.64□□□□□ -0.23
RFTN2Q52LD8 PRRC2B-210ENST00000638390 1084 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
RFTN2Q52LD8 PIGV-202ENST00000374145 2713 ntAPPRIS P1 TSL 2 BASIC13.64□□□□□ -0.23
RFTN2Q52LD8 TJAP1-208ENST00000438588 2716 ntTSL 5 BASIC13.64□□□□□ -0.23
RFTN2Q52LD8 GMPR2-206ENST00000557854 2025 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
RFTN2Q52LD8 SELENON-202ENST00000361547 4334 ntAPPRIS P4 TSL 1 (best) BASIC13.64□□□□□ -0.23
RFTN2Q52LD8 CAMKK2-204ENST00000392473 2967 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
RFTN2Q52LD8 GRIN1-202ENST00000371546 4114 ntTSL 5 BASIC13.64□□□□□ -0.23
RFTN2Q52LD8 FAM155B-201ENST00000252338 4013 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
RFTN2Q52LD8 PLAT-203ENST00000429089 2599 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
RFTN2Q52LD8 AC003986.1-201ENST00000452700 1526 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
RFTN2Q52LD8 AC125807.2-201ENST00000513358 3514 ntBASIC13.64□□□□□ -0.23
RFTN2Q52LD8 CNTD1-204ENST00000588408 2369 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
RFTN2Q52LD8 UBE2D3-210ENST00000453744 3990 ntAPPRIS ALT1 TSL 1 (best) BASIC13.64□□□□□ -0.23
RFTN2Q52LD8 LINC00327-203ENST00000576696 1308 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
RFTN2Q52LD8 LRRC41-208ENST00000617760 2158 ntTSL 5 BASIC13.64□□□□□ -0.23
RFTN2Q52LD8 SPG11-210ENST00000558319 6426 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
RFTN2Q52LD8 FFAR4-202ENST00000371483 3653 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
RFTN2Q52LD8 ZNF202-207ENST00000530393 3564 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
RFTN2Q52LD8 PCM1-202ENST00000327578 8287 ntTSL 5 BASIC13.63□□□□□ -0.23
RFTN2Q52LD8 SCAF4-202ENST00000399804 4127 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
RFTN2Q52LD8 USP22-201ENST00000261497 5220 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
RFTN2Q52LD8 CALHM1-201ENST00000329905 3053 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
RFTN2Q52LD8 ACAD8-201ENST00000281182 2249 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
RFTN2Q52LD8 AP002353.1-201ENST00000528257 1599 ntBASIC13.63□□□□□ -0.23
RFTN2Q52LD8 CYP4F3-201ENST00000221307 5050 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
RFTN2Q52LD8 CPNE5-201ENST00000244751 3897 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
RFTN2Q52LD8 TMEM201-201ENST00000340305 3851 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
RFTN2Q52LD8 KCNT1-212ENST00000628528 7057 ntAPPRIS ALT2 TSL 2 BASIC13.63□□□□□ -0.23
RFTN2Q52LD8 HFE-202ENST00000317896 1922 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
RFTN2Q52LD8 AC083964.2-201ENST00000623988 2396 ntBASIC13.63□□□□□ -0.23
RFTN2Q52LD8 AL356585.2-201ENST00000625078 2396 ntBASIC13.63□□□□□ -0.23
RFTN2Q52LD8 STK26-204ENST00000481105 1835 ntTSL 2 BASIC13.63□□□□□ -0.23
RFTN2Q52LD8 TMCC2-201ENST00000329800 2818 ntTSL 2 BASIC13.63□□□□□ -0.23
RFTN2Q52LD8 RANBP1-201ENST00000331821 837 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
RFTN2Q52LD8 TCEAL1-203ENST00000372626 721 ntAPPRIS P1 TSL 2 BASIC13.63□□□□□ -0.23
RFTN2Q52LD8 ETV2-201ENST00000379023 926 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
RFTN2Q52LD8 PSORS1C3-201ENST00000412143 593 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
RFTN2Q52LD8 RLN3-201ENST00000431365 580 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
RFTN2Q52LD8 AC093484.1-201ENST00000441875 477 ntTSL 5 BASIC13.63□□□□□ -0.23
RFTN2Q52LD8 AC103563.7-201ENST00000448734 478 ntTSL 3 BASIC13.63□□□□□ -0.23
RFTN2Q52LD8 GDNF-AS1-201ENST00000503382 604 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
RFTN2Q52LD8 AC136475.5-202ENST00000524824 587 ntTSL 4 BASIC13.63□□□□□ -0.23
RFTN2Q52LD8 AP001995.1-201ENST00000531784 1157 ntTSL 4 BASIC13.63□□□□□ -0.23
RFTN2Q52LD8 RAB40B-202ENST00000538809 704 ntTSL 2 BASIC13.63□□□□□ -0.23
RFTN2Q52LD8 ATP6V1D-206ENST00000554236 888 ntTSL 5 BASIC13.63□□□□□ -0.23
RFTN2Q52LD8 AC025259.3-202ENST00000564363 687 ntTSL 2 BASIC13.63□□□□□ -0.23
RFTN2Q52LD8 AC027601.2-201ENST00000571085 805 ntTSL 5 BASIC13.63□□□□□ -0.23
RFTN2Q52LD8 CRHR1-208ENST00000577353 1206 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
RFTN2Q52LD8 TNNT1-212ENST00000588981 1163 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
RFTN2Q52LD8 AC004706.3-207ENST00000634823 977 ntTSL 5 BASIC13.63□□□□□ -0.23
RFTN2Q52LD8 STC1-202ENST00000524323 1748 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
RFTN2Q52LD8 PCDHA5-203ENST00000614258 4248 ntBASIC13.63□□□□□ -0.23
RFTN2Q52LD8 AL162431.2-201ENST00000358073 2424 ntTSL 2 BASIC13.63□□□□□ -0.23
RFTN2Q52LD8 DSN1-204ENST00000426836 2441 ntAPPRIS P3 TSL 2 BASIC13.63□□□□□ -0.23
RFTN2Q52LD8 DENND3-211ENST00000519811 5482 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
RFTN2Q52LD8 ANKH-201ENST00000284268 8203 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
RFTN2Q52LD8 C8orf31-201ENST00000395172 1875 ntTSL 2 BASIC13.63□□□□□ -0.23
RFTN2Q52LD8 METTL6-201ENST00000383789 1413 ntTSL 2 BASIC13.63□□□□□ -0.23
RFTN2Q52LD8 YIPF3-213ENST00000506469 1444 ntTSL 5 BASIC13.63□□□□□ -0.23
RFTN2Q52LD8 FP565260.6-203ENST00000620015 1435 ntTSL 3 BASIC13.63□□□□□ -0.23
RFTN2Q52LD8 NRIP3-201ENST00000309166 3809 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
RFTN2Q52LD8 NEK4-202ENST00000383721 2576 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
RFTN2Q52LD8 KCTD7-201ENST00000275532 4795 ntTSL 4 BASIC13.63□□□□□ -0.23
RFTN2Q52LD8 FCHSD1-209ENST00000522783 2477 ntTSL 5 BASIC13.63□□□□□ -0.23
RFTN2Q52LD8 C19orf57-204ENST00000586783 2454 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
RFTN2Q52LD8 AHCYP4-201ENST00000419201 1315 ntBASIC13.63□□□□□ -0.23
RFTN2Q52LD8 LIMD2-201ENST00000259006 3193 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
RFTN2Q52LD8 TRAIP-201ENST00000331456 2028 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
RFTN2Q52LD8 CYP26B1-201ENST00000001146 4732 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
RFTN2Q52LD8 LSS-201ENST00000356396 2995 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
RFTN2Q52LD8 STIM1-220ENST00000616714 4356 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
RFTN2Q52LD8 SLC16A1-201ENST00000369626 3910 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 42.6 ms