Protein–RNA interactions for Protein: P98172

EFNB1, Ephrin-B1, humanhuman

Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EFNB1P98172 TMEM205-211ENST00000589555 788 ntAPPRIS P1 TSL 2 BASIC12.61□□□□□ -0.39
EFNB1P98172 AL356740.1-201ENST00000602192 1297 ntBASIC12.61□□□□□ -0.39
EFNB1P98172 RIC8A-217ENST00000626818 159 ntTSL 5 BASIC12.61□□□□□ -0.39
EFNB1P98172 LINC01672-205ENST00000635092 633 ntTSL 5 BASIC12.61□□□□□ -0.39
EFNB1P98172 DENND4C-209ENST00000602925 6831 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
EFNB1P98172 PCOLCE-201ENST00000223061 1702 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
EFNB1P98172 HSD17B6-207ENST00000555805 1722 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
EFNB1P98172 PAAF1-207ENST00000536003 1639 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
EFNB1P98172 BVES-201ENST00000314641 5567 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
EFNB1P98172 KLKP1-203ENST00000600104 1532 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
EFNB1P98172 SSBP2-220ENST00000615665 4465 ntTSL 5 BASIC12.61□□□□□ -0.39
EFNB1P98172 MORN4-201ENST00000307450 2315 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
EFNB1P98172 METAP2-205ENST00000546753 1862 ntTSL 2 BASIC12.61□□□□□ -0.39
EFNB1P98172 TARBP2-202ENST00000394357 1402 ntTSL 3 BASIC12.61□□□□□ -0.39
EFNB1P98172 PPARGC1B-202ENST00000360453 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
EFNB1P98172 AC102953.2-201ENST00000609755 3026 ntBASIC12.61□□□□□ -0.39
EFNB1P98172 FBXO3-203ENST00000526785 5798 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
EFNB1P98172 AC093797.1-201ENST00000411847 1789 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
EFNB1P98172 WDR33-201ENST00000322313 9471 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
EFNB1P98172 SLC35B3-201ENST00000379660 2137 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
EFNB1P98172 RC3H2-205ENST00000423239 3623 ntTSL 5 BASIC12.61□□□□□ -0.39
EFNB1P98172 ACO1-203ENST00000541043 3618 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
EFNB1P98172 ARMCX4-202ENST00000423738 7424 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
EFNB1P98172 MYCBP-201ENST00000397572 2818 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
EFNB1P98172 MAPK14-202ENST00000229795 4319 ntAPPRIS ALT1 TSL 1 (best) BASIC12.61□□□□□ -0.39
EFNB1P98172 NR3C1-203ENST00000394464 6795 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
EFNB1P98172 FAM122A-201ENST00000394264 4575 ntAPPRIS P1 BASIC12.61□□□□□ -0.39
EFNB1P98172 LINC00665-205ENST00000585356 1557 ntTSL 2 BASIC12.6□□□□□ -0.39
EFNB1P98172 SUCO-204ENST00000608151 5790 ntTSL 5 BASIC12.6□□□□□ -0.39
EFNB1P98172 TEX13C-201ENST00000632600 5095 ntAPPRIS P1 BASIC12.6□□□□□ -0.39
EFNB1P98172 GPAT4-201ENST00000396987 6298 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
EFNB1P98172 RNF43-202ENST00000577625 2198 ntTSL 2 BASIC12.6□□□□□ -0.39
EFNB1P98172 ADRA1A-210ENST00000519229 1838 ntTSL 5 BASIC12.6□□□□□ -0.39
EFNB1P98172 SLC1A1-201ENST00000262352 3722 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
EFNB1P98172 ITSN1-205ENST00000381291 5437 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
EFNB1P98172 NFATC4-226ENST00000556279 2924 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
EFNB1P98172 NCF4-201ENST00000248899 1396 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
EFNB1P98172 AC012531.2-201ENST00000512206 1389 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
EFNB1P98172 FAM201A-201ENST00000377680 3437 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
EFNB1P98172 OCA2-201ENST00000353809 3068 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
EFNB1P98172 RRBP1-206ENST00000455029 2485 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
EFNB1P98172 ENOX1-201ENST00000261488 2982 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
EFNB1P98172 CSF2-201ENST00000296871 787 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
EFNB1P98172 LSS-201ENST00000356396 2995 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
EFNB1P98172 SPAG5-AS1-201ENST00000414744 2143 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
EFNB1P98172 AL391119.1-201ENST00000416563 271 ntTSL 5 BASIC12.6□□□□□ -0.39
EFNB1P98172 ALG1L2-201ENST00000425059 969 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
EFNB1P98172 ARL6IP4-207ENST00000426960 910 ntAPPRIS ALT2 TSL 3 BASIC12.6□□□□□ -0.39
EFNB1P98172 AC011742.3-201ENST00000439053 820 ntBASIC12.6□□□□□ -0.39
EFNB1P98172 C19orf24-202ENST00000469144 668 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
EFNB1P98172 SLC25A30-AS1-201ENST00000506633 701 ntTSL 3 BASIC12.6□□□□□ -0.39
EFNB1P98172 RMDN1-212ENST00000519966 1164 ntTSL 2 BASIC12.6□□□□□ -0.39
EFNB1P98172 AL356756.1-201ENST00000550941 551 ntTSL 3 BASIC12.6□□□□□ -0.39
EFNB1P98172 LINC02299-201ENST00000556669 430 ntTSL 5 BASIC12.6□□□□□ -0.39
EFNB1P98172 SPCS2P1-201ENST00000561636 679 ntBASIC12.6□□□□□ -0.39
EFNB1P98172 AP006547.1-201ENST00000563435 692 ntBASIC12.6□□□□□ -0.39
EFNB1P98172 ZNF772-207ENST00000601768 482 ntTSL 3 BASIC12.6□□□□□ -0.39
EFNB1P98172 AGAP12P-202ENST00000603888 2141 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
EFNB1P98172 BCRP3-202ENST00000621462 1021 ntTSL 3 BASIC12.6□□□□□ -0.39
EFNB1P98172 AC004706.3-207ENST00000634823 977 ntTSL 5 BASIC12.6□□□□□ -0.39
EFNB1P98172 PDLIM2-201ENST00000265810 4592 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
EFNB1P98172 GFI1B-203ENST00000372123 1514 ntTSL 5 BASIC12.6□□□□□ -0.39
EFNB1P98172 DAB2IP-202ENST00000309989 3500 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
EFNB1P98172 AC239798.2-201ENST00000415338 3540 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
EFNB1P98172 FP565260.6-203ENST00000620015 1435 ntTSL 3 BASIC12.6□□□□□ -0.39
EFNB1P98172 KCNN3-202ENST00000358505 1658 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
EFNB1P98172 FAM86JP-201ENST00000467239 1910 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
EFNB1P98172 NTRK3-AS1-201ENST00000569588 2663 ntTSL 2 BASIC12.6□□□□□ -0.39
EFNB1P98172 KANK4-201ENST00000317477 2080 ntTSL 2 BASIC12.6□□□□□ -0.39
EFNB1P98172 ZFYVE19-209ENST00000564258 2059 ntTSL 2 BASIC12.6□□□□□ -0.39
EFNB1P98172 ATP1B3-201ENST00000286371 1811 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
EFNB1P98172 DDX46-212ENST00000628477 1584 ntTSL 5 BASIC12.6□□□□□ -0.39
EFNB1P98172 ZNF124-202ENST00000472531 2243 ntTSL 2 BASIC12.6□□□□□ -0.39
EFNB1P98172 MCF2L-204ENST00000375608 3648 ntTSL 5 BASIC12.6□□□□□ -0.39
EFNB1P98172 SIAE-206ENST00000618733 1980 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
EFNB1P98172 AL023775.1-201ENST00000454907 1746 ntBASIC12.59□□□□□ -0.39
EFNB1P98172 AC245123.1-202ENST00000612422 1719 ntTSL 5 BASIC12.59□□□□□ -0.39
EFNB1P98172 NEFH-201ENST00000310624 3783 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
EFNB1P98172 LINC01662-201ENST00000342888 1859 ntTSL 2 BASIC12.59□□□□□ -0.39
EFNB1P98172 ORC6-201ENST00000219097 1628 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
EFNB1P98172 MIER1-202ENST00000355977 3595 ntTSL 5 BASIC12.59□□□□□ -0.39
EFNB1P98172 NPAS4-201ENST00000311034 3303 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
EFNB1P98172 PRAM1-201ENST00000423345 2667 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
EFNB1P98172 ZFYVE19-202ENST00000336455 1784 ntTSL 2 BASIC12.59□□□□□ -0.39
EFNB1P98172 NTRK2-201ENST00000277120 8633 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
EFNB1P98172 VSIR-201ENST00000394957 4689 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
EFNB1P98172 SDC2-201ENST00000302190 3759 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
EFNB1P98172 IFRD1-205ENST00000429071 1938 ntTSL 2 BASIC12.59□□□□□ -0.39
EFNB1P98172 SLC5A11-211ENST00000569071 1919 ntTSL 5 BASIC12.59□□□□□ -0.39
EFNB1P98172 ZBED2-201ENST00000317012 2311 ntAPPRIS P1 TSL 2 BASIC12.59□□□□□ -0.39
EFNB1P98172 NLRP13-201ENST00000342929 3132 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
EFNB1P98172 LHFPL1-201ENST00000371968 1675 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
EFNB1P98172 LIMS2-209ENST00000410038 1695 ntTSL 2 BASIC12.59□□□□□ -0.39
EFNB1P98172 LINC00963-203ENST00000423918 1654 ntTSL 2 BASIC12.59□□□□□ -0.39
EFNB1P98172 BST2-201ENST00000252593 1019 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
EFNB1P98172 NUDT2-201ENST00000346365 960 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
EFNB1P98172 FAM213A-204ENST00000372188 829 ntAPPRIS P1 TSL 2 BASIC12.59□□□□□ -0.39
EFNB1P98172 U82695.1-202ENST00000428676 700 ntTSL 2 BASIC12.59□□□□□ -0.39
EFNB1P98172 AL513211.1-201ENST00000429053 483 ntTSL 3 BASIC12.59□□□□□ -0.39
EFNB1P98172 C1QTNF6-203ENST00000434784 975 ntTSL 3 BASIC12.59□□□□□ -0.39
Retrieved 100 of 98,524 protein–RNA pairs in 46.4 ms