Protein–RNA interactions for Protein: P78357

CNTNAP1, Contactin-associated protein 1, humanhuman

Predictions only

Length 1,384 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP1P78357 CCL24-201ENST00000222902 582 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CNTNAP1P78357 PDCD6-201ENST00000264933 1135 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
CNTNAP1P78357 NANOS3-201ENST00000339133 581 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
CNTNAP1P78357 AL513211.1-201ENST00000429053 483 ntTSL 3 BASIC16.49■□□□□ 0.23
CNTNAP1P78357 AC103563.1-201ENST00000429316 123 ntBASIC16.49■□□□□ 0.23
CNTNAP1P78357 AC005722.1-201ENST00000431878 964 ntBASIC16.49■□□□□ 0.23
CNTNAP1P78357 RN7SL87P-201ENST00000497657 288 ntBASIC16.49■□□□□ 0.23
CNTNAP1P78357 AC117834.1-201ENST00000523197 602 ntTSL 4 BASIC16.49■□□□□ 0.23
CNTNAP1P78357 RMDN1-218ENST00000523911 950 ntTSL 2 BASIC16.49■□□□□ 0.23
CNTNAP1P78357 AC073896.3-201ENST00000546789 437 ntTSL 5 BASIC16.49■□□□□ 0.23
CNTNAP1P78357 BOLA3P2-201ENST00000586496 323 ntBASIC16.49■□□□□ 0.23
CNTNAP1P78357 PRR20FP-201ENST00000603320 180 ntBASIC16.49■□□□□ 0.23
CNTNAP1P78357 AC092115.1-201ENST00000566277 1402 ntBASIC16.49■□□□□ 0.23
CNTNAP1P78357 CTNNBIP1-203ENST00000377263 3000 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CNTNAP1P78357 CCDC116-201ENST00000292779 2260 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
CNTNAP1P78357 NME7-203ENST00000472647 1590 ntAPPRIS ALT2 TSL 2 BASIC16.48■□□□□ 0.23
CNTNAP1P78357 ATXN7-213ENST00000538065 6842 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
CNTNAP1P78357 OSBPL5-202ENST00000348039 2798 ntTSL 2 BASIC16.48■□□□□ 0.23
CNTNAP1P78357 AAAS-202ENST00000394384 1703 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
CNTNAP1P78357 ADAM23-202ENST00000374415 2714 ntAPPRIS ALT1 TSL 5 BASIC16.48■□□□□ 0.23
CNTNAP1P78357 SOCS2-212ENST00000622746 2881 ntAPPRIS P1 TSL 3 BASIC16.48■□□□□ 0.23
CNTNAP1P78357 BRD2-201ENST00000374825 4894 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
CNTNAP1P78357 SALL4P6-201ENST00000429385 1691 ntBASIC16.48■□□□□ 0.23
CNTNAP1P78357 AC046130.1-201ENST00000501954 2179 ntTSL 5 BASIC16.48■□□□□ 0.23
CNTNAP1P78357 SHCBP1-201ENST00000303383 3461 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CNTNAP1P78357 PCDHGA12-202ENST00000613314 2634 ntAPPRIS ALT2 BASIC16.48■□□□□ 0.23
CNTNAP1P78357 SALL2-205ENST00000611430 1466 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
CNTNAP1P78357 ANKRD46-205ENST00000520311 3270 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
CNTNAP1P78357 CSRP1-202ENST00000367306 2129 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
CNTNAP1P78357 RERG-201ENST00000256953 2264 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CNTNAP1P78357 SPAG1-205ENST00000520508 1796 ntTSL 5 BASIC16.48■□□□□ 0.23
CNTNAP1P78357 HEXA-206ENST00000566304 1795 ntTSL 2 BASIC16.48■□□□□ 0.23
CNTNAP1P78357 ELP4-201ENST00000350638 1907 ntAPPRIS ALT1 TSL 5 BASIC16.48■□□□□ 0.23
CNTNAP1P78357 TTC8-203ENST00000346301 2058 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
CNTNAP1P78357 FAM86FP-201ENST00000338711 969 ntBASIC16.48■□□□□ 0.23
CNTNAP1P78357 S100A2-202ENST00000368708 998 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CNTNAP1P78357 IGHV3-66-201ENST00000390632 427 ntAPPRIS P1 BASIC16.48■□□□□ 0.23
CNTNAP1P78357 TUBB2BP1-201ENST00000404155 871 ntBASIC16.48■□□□□ 0.23
CNTNAP1P78357 AL161733.1-201ENST00000421067 462 ntTSL 3 BASIC16.48■□□□□ 0.23
CNTNAP1P78357 GULOP-201ENST00000454030 748 ntBASIC16.48■□□□□ 0.23
CNTNAP1P78357 MARK2P17-201ENST00000498560 841 ntBASIC16.48■□□□□ 0.23
CNTNAP1P78357 OR52V1P-201ENST00000515557 898 ntBASIC16.48■□□□□ 0.23
CNTNAP1P78357 SLC13A2-205ENST00000545060 1276 ntTSL 5 BASIC16.48■□□□□ 0.23
CNTNAP1P78357 MAFG-AS1-202ENST00000583492 969 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
CNTNAP1P78357 SMIM26-203ENST00000608034 670 ntAPPRIS ALT2 TSL 3 BASIC16.48■□□□□ 0.23
CNTNAP1P78357 MIR8071-1-201ENST00000616769 65 ntBASIC16.48■□□□□ 0.23
CNTNAP1P78357 MIR8071-2-201ENST00000616772 65 ntBASIC16.48■□□□□ 0.23
CNTNAP1P78357 PAX8-AS1-219ENST00000623306 840 ntTSL 5 BASIC16.48■□□□□ 0.23
CNTNAP1P78357 PDZD4-202ENST00000393758 3763 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
CNTNAP1P78357 GLIPR1L2-201ENST00000320460 1729 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
CNTNAP1P78357 SNRK-204ENST00000454177 2961 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
CNTNAP1P78357 AC027796.3-201ENST00000572919 4753 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
CNTNAP1P78357 STC2-201ENST00000265087 5353 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CNTNAP1P78357 ZNF425-201ENST00000378061 3220 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CNTNAP1P78357 PAPLN-202ENST00000340738 5834 ntAPPRIS P2 TSL 5 BASIC16.47■□□□□ 0.23
CNTNAP1P78357 MYC-206ENST00000613283 1365 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
CNTNAP1P78357 B3GLCT-201ENST00000343307 4254 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CNTNAP1P78357 ARHGAP9-201ENST00000393791 2597 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
CNTNAP1P78357 MANSC1-202ENST00000535902 5831 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CNTNAP1P78357 EPHB4-201ENST00000358173 4329 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CNTNAP1P78357 AL021395.1-201ENST00000611791 2232 ntTSL 5 BASIC16.47■□□□□ 0.23
CNTNAP1P78357 USP39-207ENST00000450066 2086 ntTSL 2 BASIC16.47■□□□□ 0.23
CNTNAP1P78357 ELOA2-202ENST00000620522 1641 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
CNTNAP1P78357 AC106785.2-201ENST00000564385 1319 ntBASIC16.47■□□□□ 0.23
CNTNAP1P78357 SC5D-201ENST00000264027 2456 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CNTNAP1P78357 AC087164.1-202ENST00000583062 2158 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
CNTNAP1P78357 PARP10-201ENST00000313028 3497 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
CNTNAP1P78357 GFI1B-207ENST00000636137 1870 ntTSL 5 BASIC16.47■□□□□ 0.23
CNTNAP1P78357 CBWD5-204ENST00000377392 2863 ntTSL 2 BASIC16.47■□□□□ 0.23
CNTNAP1P78357 CLIC6-202ENST00000360731 3860 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
CNTNAP1P78357 XRCC3-211ENST00000555055 2584 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CNTNAP1P78357 UPB1-201ENST00000326010 2290 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CNTNAP1P78357 VSTM2A-204ENST00000407838 3112 ntAPPRIS P1 TSL 3 BASIC16.47■□□□□ 0.23
CNTNAP1P78357 REG3G-202ENST00000393897 856 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CNTNAP1P78357 MIR1307-201ENST00000408840 149 ntBASIC16.47■□□□□ 0.23
CNTNAP1P78357 AC000077.1-201ENST00000420012 953 ntBASIC16.47■□□□□ 0.23
CNTNAP1P78357 AL355500.1-201ENST00000439421 297 ntTSL 3 BASIC16.47■□□□□ 0.23
CNTNAP1P78357 AL365500.1-201ENST00000442783 868 ntTSL 3 BASIC16.47■□□□□ 0.23
CNTNAP1P78357 GYG1-209ENST00000483267 801 ntTSL 2 BASIC16.47■□□□□ 0.23
CNTNAP1P78357 TBC1D3P6-201ENST00000505954 962 ntBASIC16.47■□□□□ 0.23
CNTNAP1P78357 AC087442.1-201ENST00000525563 249 ntTSL 2 BASIC16.47■□□□□ 0.23
CNTNAP1P78357 LIMD2-210ENST00000582055 509 ntTSL 2 BASIC16.47■□□□□ 0.23
CNTNAP1P78357 MIR4326-201ENST00000582203 59 ntBASIC16.47■□□□□ 0.23
CNTNAP1P78357 C17orf62-234ENST00000584503 584 ntTSL 2 BASIC16.47■□□□□ 0.23
CNTNAP1P78357 ZNF235-203ENST00000589248 532 ntTSL 3 BASIC16.47■□□□□ 0.23
CNTNAP1P78357 PAX6-237ENST00000638696 1203 ntTSL 5 BASIC16.47■□□□□ 0.23
CNTNAP1P78357 FAM160A2-202ENST00000449352 3354 ntAPPRIS ALT1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CNTNAP1P78357 UGDH-201ENST00000316423 3216 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CNTNAP1P78357 POU2F2-204ENST00000526816 3218 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
CNTNAP1P78357 EHD3-201ENST00000322054 4636 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CNTNAP1P78357 FGD2-201ENST00000274963 3046 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CNTNAP1P78357 CRISP2-201ENST00000339139 1382 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CNTNAP1P78357 IL6ST-209ENST00000502326 3007 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
CNTNAP1P78357 NBPF15-202ENST00000488031 4535 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
CNTNAP1P78357 CCDC85A-201ENST00000407595 3982 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CNTNAP1P78357 ICMT-201ENST00000343813 4771 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CNTNAP1P78357 RPL15-201ENST00000307839 2730 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CNTNAP1P78357 ZNF239-203ENST00000426961 2027 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.23
CNTNAP1P78357 TBC1D9B-201ENST00000355235 5119 ntAPPRIS P3 TSL 5 BASIC16.46■□□□□ 0.23
CNTNAP1P78357 LINC00476-204ENST00000429781 2825 ntTSL 2 BASIC16.46■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 70.5 ms